Co-reporter:Huifang Xu;Linlin Ning;Wenxia Yang;Bo Fang;Cong Wang
Biotechnology for Biofuels 2017 Volume 10( Issue 1) pp:208
Publication Date(Web):07 September 2017
DOI:10.1186/s13068-017-0894-x
P450 fatty acid decarboxylases represented by the unusual CYP152 peroxygenase family member OleTJE have been receiving great attention recently since these P450 enzymes are able to catalyze the simple and direct production of 1-alkenes for potential applications in biofuels and biomaterials. To gain more mechanistic insights, broader substrate spectra, and improved decarboxylative activities, it is demanded to discover and investigate more P450 fatty acid decarboxylases.Here, we describe for the first time the expression, purification, and in vitro biochemical characterization of two new CYP152 peroxygenases, CYP-Aa162 and CYP-Sm46Δ29, that are capable of decarboxylating straight-chain saturated fatty acids. Both enzymes were found to catalyze the decarboxylation and hydroxylation of a broad range of free fatty acids (C10–C20) with overlapping substrate specificity, yet distinct chemoselectivity. CYP-Sm46Δ29 works primarily as a fatty (lauric) acid decarboxylase (66.1 ± 3.9% 1-undecene production) while CYP-Aa162 more as a fatty (lauric) acid hydroxylase (72.2 ± 0.9% hydroxy lauric acid production). Notably, the optical spectroscopic analysis of functional CYP-Sm46Δ29 revealed no characteristic P450 band, suggesting a unique heme coordination environment. Active-site mutagenesis analysis showed that substitution with the proposed key decarboxylation-modulating residues, His85 and Ile170, enhanced the decarboxylation activity of CYP-Aa162 and P450BSβ, emphasizing the importance of these residues in directing the decarboxylation pathway. Furthermore, the steady-state kinetic analysis of CYP-Aa162 and CYP-Sm46Δ29 revealed both cooperative and substrate inhibition behaviors which are substrate carbon chain length dependent.Our data identify CYP-Sm46Δ29 as an efficient OleTJE-like fatty acid decarboxylase. Oxidative decarboxylation chemoselectivity of the CYP152 decarboxylases is largely dependent upon the carbon chain length of fatty acid substrates and their precise positioning in the enzyme active site. Finally, the kinetic mode analysis of the enzymes could provide important guidance for future process design.
Co-reporter:Xingwang Zhang
Natural Product Reports (1984-Present) 2017 vol. 34(Issue 9) pp:1061-1089
Publication Date(Web):2017/08/30
DOI:10.1039/C7NP00028F
Covering: 2000 to 2017
Cytochrome P450 enzymes (P450s) are the most versatile biocatalysts in nature. The catalytic competence of these extraordinary hemoproteins is broadly harnessed by numerous chemical defenders such as bacteria, fungi, and plants for the generation of diverse and complex natural products. Rather than the common tailoring reactions (e.g. hydroxylation and epoxidation) mediated by the majority of biosynthetic P450s, in this review, we will focus on the unusual P450 enzymes in relation to new chemistry, skeleton construction, and structure re-shaping via their own unique catalytic power or the intriguing protein–protein interactions between P450s and other proteins. These uncommon P450 reactions lead to a higher level of chemical space expansion for natural products, through which a broader spectrum of bioactivities can be gained by the host organisms.
Co-reporter:Yue Sun;Li Ma;Dongfei Han;Lei Du
Journal of Industrial Microbiology & Biotechnology 2017 Volume 44( Issue 2) pp:161-166
Publication Date(Web):2017 February
DOI:10.1007/s10295-016-1875-y
The cytochrome P450 enzymes (CYPs) CYP-sb21 from Sebekia benihana and CYP-pa1 from Pseudonocardia autotrophica are able to hydroxylate the immunosuppressant cyclosporin A (CsA) in a regioselective manner, giving rise to the production of two hair-stimulating agents (with dramatically attenuated immunosuppressant activity), γ-hydroxy-N-methyl-l-Leu4-CsA (CsA-4-OH) and γ-hydroxy-N-methyl-l-Leu9-CsA (CsA-9-OH). Recently, the in vitro activity of CYP-sb21 was identified using several surrogate redox partner proteins. Herein, we reconstituted the in vitro activity of CYP-pa1 for the first time via a similar strategy. Moreover, the supporting activities of a set of ferredoxin (Fdx)/ferredoxin reductase (FdR) pairs from the cyanobacterium Synechococcus elongatus PCC 7942 were comparatively analyzed to identify the optimal redox systems for these two CsA hydroxylases. The results suggest the great value of cyanobacterial redox partner proteins for both academic research and industrial application of P450 biocatalysts.
Co-reporter:Xingwang Zhang, Zhong Li, Lei Du, George E. Chlipala, Patricia C. Lopez, Wei Zhang, David H. Sherman, Shengying Li
Tetrahedron Letters 2016 Volume 57(Issue 52) pp:5919-5923
Publication Date(Web):28 December 2016
DOI:10.1016/j.tetlet.2016.11.080
•The first linear tirandamycin (K) was isolated from Streptomyces sp. 307–9 (ΔtamI).•Tirandamycin K provides new insights into tirandamycin biosynthesis.•The bicyclic ketal ring is necessary for the antibiotic activity of tirandamycins.Tirandamycin K (7), the first linear 7,13;9,13-diseco-tirandamycin derivative, was isolated from the tamI (encoding the TamI P450 monooxygenase) disruption mutant strain (ΔtamI) of marine Streptomyces sp. 307–9. Its chemical structure with relative and absolute configurations was elucidated by a combination of extensive spectroscopic analyses and biosynthetic inferences. Structural elucidation of this unusual compound provides new insights into tirandamycin biosynthesis. Moreover, examination of the biological activity of 7 confirms the essential function of the bicyclic ketal ring for antibiotic activities of tirandamycins.
Co-reporter:Dr. Wei Zhang;Shaona Cao;Dr. Li Qiu;Dr. Fengxia Qi;Zhong Li;Ying Yang;Dr. Shaohua Huang;Fali Bai; Dr. Changning Liu; Dr. Xiaobo Wan; Dr. Shengying Li
ChemBioChem 2015 Volume 16( Issue 4) pp:565-569
Publication Date(Web):
DOI:10.1002/cbic.201402600
Abstract
Mycophenolic acid (MPA, 1) is a clinically important immunosuppressant. In this report, a gene cluster mpa′ responsible for the biosynthesis of 1 was identified from Penicillium brevicompactum NRRL 864. The S-adenosyl-L-methionine-dependent (SAM-dependent) O-methyltransferase encoded by the mpaG′ gene was functionally and kinetically characterized in vitro. MpaG′ catalyzes the methylation of demethylmycophenolic acid (DMMPA, 6) to form 1. It also showed significant substrate flexibility by methylating two structural derivatives of 6 prepared by organic synthesis.
Co-reporter:Wei Zhang ; Yi Liu ; Jinyong Yan ; Shaona Cao ; Fali Bai ; Ying Yang ; Shaohua Huang ; Lishan Yao ; Yojiro Anzai ; Fumio Kato ; Larissa M. Podust ; David H. Sherman
Journal of the American Chemical Society 2014 Volume 136(Issue 9) pp:3640-3646
Publication Date(Web):February 12, 2014
DOI:10.1021/ja4130302
Cytochrome P450 enzymes are capable of catalyzing a great variety of synthetically useful reactions such as selective C–H functionalization. Surrogate redox partners are widely used for reconstitution of P450 activity based on the assumption that the choice of these auxiliary proteins or their mode of action does not affect the type and selectivity of reactions catalyzed by P450s. Herein, we present an exceptional example to challenge this postulate. MycG, a multifunctional biosynthetic P450 monooxygenase responsible for hydroxylation and epoxidation of 16-membered ring macrolide mycinamicins, is shown to catalyze the unnatural N-demethylation(s) of a range of mycinamicin substrates when partnered with the free Rhodococcus reductase domain RhFRED or the engineered Rhodococcus-spinach hybrid reductase RhFRED-Fdx. By contrast, MycG fused with the RhFRED or RhFRED-Fdx reductase domain mediates only physiological oxidations. This finding highlights the larger potential role of variant redox partner protein–protein interactions in modulating the catalytic activity of P450 enzymes.
Co-reporter:Dr. Wei Zhang;Dr. Jeffrey L. Fortman;Dr. Jacob C. Carlson;Dr. Jinyong Yan;Yi Liu;Fali Bai;Dr. Wenna Guan;Dr. Junyong Jia; Teatulohi Matainaho; David H. Sherman; Shengying Li
ChemBioChem 2013 Volume 14( Issue 3) pp:301-306
Publication Date(Web):
DOI:10.1002/cbic.201200743