Pavel Nagorny

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Name: Nagorny, Pavel
Organization: University of Michigan , USA
Department: Department of Chemistry
Title: Assistant(PhD)

TOPICS

Co-reporter:Jia-Hui Tay, Alonso J. Argüelles, Matthew D. DeMars II, Paul M. Zimmerman, David H. Sherman, and Pavel Nagorny
Journal of the American Chemical Society June 28, 2017 Volume 139(Issue 25) pp:8570-8570
Publication Date(Web):June 19, 2017
DOI:10.1021/jacs.7b03198
This work describes the first example of using chiral catalysts to control site-selectivity for the glycosylations of complex polyols such as 6-deoxyerythronolide B and oleandomycin-derived macrolactones. The regiodivergent introduction of sugars at the C3, C5, and C11 positions of macrolactones was achieved by selecting appropriate chiral acids as catalysts or through introduction of stoichiometric boronic acid-based additives. BINOL-based chiral phosphoric acids (CPAs) were used to catalyze highly selective glycosylations at the C5 positions of macrolactones (up to 99:1 rr), whereas the use of SPINOL-based CPAs resulted in selectivity switch and glycosylation of the C3 alcohol (up to 91:9 rr). Additionally, the C11 position of macrolactones was selectively functionalized through traceless protection of the C3/C5 diol with boronic acids prior to glycosylation. Investigation of the reaction mechanism for the CPA-controlled glycosylations revealed the involvement of covalently linked anomeric phosphates rather than oxocarbenium ion pairs as the reactive intermediates.
Co-reporter:Jeonghyo Lee;Alina Borovika;Yaroslav Khomutnyk
Chemical Communications 2017 vol. 53(Issue 64) pp:8976-8979
Publication Date(Web):2017/08/08
DOI:10.1039/C7CC05052F
This work describes chiral phosphoric acid (CPA)-catalyzed desymmetrizative glycosylation of meso-diol derived from 2-deoxystreptamine. The chirality of CPA dictates the outcome of the glycosylation reactions, and the use of enantiomeric CPAs results in either C4-glycosylated (67 : 33 d.r.) or C6-glycosylated (86 : 14 d.r.) 2-deoxystreptamines. These glycosylated products can be converted to aminoglycosides, and the application of this strategy to the synthesis of protected iso-neamine and iso-kanamycin B with inverted connection at the C4 and C6 positions is described.
Co-reporter:Will Kaplan; Hem Raj Khatri
Journal of the American Chemical Society 2016 Volume 138(Issue 22) pp:7194-7198
Publication Date(Web):May 27, 2016
DOI:10.1021/jacs.6b04029
The expedient and scalable approach to cardiotonic steroids carrying oxygenation at the C11- and C19-positions has been developed and applied to the total asymmetric synthesis of steroids 19-hydroxysarmentogenin and trewianin aglycone as well as to the assembly of the panogenin core. This new approach features enantioselective organocatalytic oxidation of an aldehyde, diastereoselective Cu(OTf)2-catalyzed Michael reaction/tandem aldol cyclizations, and one-pot reduction/transposition reactions allowing a rapid (7 linear steps) assembly of a functionalized cardenolide skeleton. The ability to quickly set this steroidal core with preinstalled functional handles and diversity elements eliminates the need for difficult downstream functionalizations and substantially improves the accessibility to the entire class of cardenolides and their derivatives for biological evaluation.
Co-reporter:Nathan R. Cichowicz; Will Kaplan; Yaroslav Khomutnyk; Bijay Bhattarai; Zhankui Sun
Journal of the American Chemical Society 2015 Volume 137(Issue 45) pp:14341-14348
Publication Date(Web):October 22, 2015
DOI:10.1021/jacs.5b08528
A new scalable enantioselective approach to functionalized oxygenated steroids is described. This strategy is based on chiral bis(oxazoline) copper(II) complex-catalyzed enantioselective and diastereoselective Michael reactions of cyclic ketoesters and enones to install vicinal quaternary and tertiary stereocenters. In addition, the utility of copper(II) salts as highly active catalysts for the Michael reactions of traditionally unreactive β,β′-enones and substituted β,β′-ketoesters that results in unprecedented Michael adducts containing vicinal all-carbon quaternary centers is also demonstrated. The Michael adducts subsequently undergo base-promoted diastereoselective aldol cascade reactions resulting in the natural or unnatural steroid skeletons. The experimental and computational studies suggest that the torsional strain effects arising from the presence of the Δ5-unsaturation are key controlling elements for the formation of the natural cardenolide scaffold. The described method enables expedient generation of polycyclic molecules including modified steroidal scaffolds as well as challenging-to-synthesize Hajos–Parrish and Wieland–Miescher ketones.
Co-reporter:Jia-Hui Tay, Alonso J. Arguelles, and Pavel Nagorny
Organic Letters 2015 Volume 17(Issue 15) pp:3774-3777
Publication Date(Web):July 21, 2015
DOI:10.1021/acs.orglett.5b01754
A direct single-step hydrogenation of BINOL-based chiral phosphoric acids, N-triflyl phosphoramides, and disulfonimides to the corresponding H8-BINOL Brønsted acids in excellent yields and chemoselectivities is described. In addition, the conditions for the single-step oxidation of H8-BINOL-based Brønsted acids into the corresponding BINOL-based acids have been identified and employed to accomplish these interconversions in 41–81% yield.
Co-reporter:Bijay Bhattarai, Jia-Hui Tay and Pavel Nagorny  
Chemical Communications 2015 vol. 51(Issue 25) pp:5398-5401
Publication Date(Web):03 Dec 2014
DOI:10.1039/C4CC08604J
A thiophosphoramide-based co-catalyst was found to significantly accelerate copper(II) trifluoromethanesulfonate-catalyzed arylation of potassium carboxylates with diaryliodonium salts. This effect could be attributed to counterion activation of diaryliodonium salts or organocopper intermediates by thiophosphoramides. Inclusion of thiophosphoramides permits achieving significantly milder reaction conditions and expands the scope of solvents and diaryliodonium counterions that could be used for the arylation of carboxylate nucleophiles.
Co-reporter:Dr. Zhankui Sun;Grace A. Winschel;Dr. Paul M. Zimmerman;Dr. Pavel Nagorny
Angewandte Chemie International Edition 2014 Volume 53( Issue 42) pp:11194-11198
Publication Date(Web):
DOI:10.1002/anie.201405128

Abstract

An enantioselective intramolecular chiral phosphoric acid-catalyzed cyclization of unsaturated acetals has been utilized for the synthesis of functionalized chiral piperidines. The chiral enol ether products of these cyclizations undergo subsequent in situ enantioenrichment through acetalization of the minor enantiomer. A new computational reaction exploration method was utilized to elucidate the mechanism and stereoselectivity of this transformation. Rather than confirming the originally postulated cyclization proceeding directly through a vinyl oxocarbenium ion, simulations identified an alternative two-step mechanism involving the formation of a mixed chiral phosphate acetal, which undergoes a concerted, asynchronous SN2′-like displacement to yield the product with stereoselectivity in agreement with experimental observations.

Co-reporter:Brian J. Larsen, Zhankui Sun, and Pavel Nagorny
Organic Letters 2013 Volume 15(Issue 12) pp:2998-3001
Publication Date(Web):June 3, 2013
DOI:10.1021/ol401186f
An enantioselective synthesis of potent eukaryotic translation elongation inhibitor lactimidomycin has been accomplished in 21 linear steps. This synthesis features a Zn(II)-mediated Horner–Wadsworth–Emmons reaction that could be executed on a large scale to provide the highly strained 12-membered lactimidomycin macrolactone.
Co-reporter:Dr. Enoch Mensah;Nicole Camasso;Will Kaplan ;Dr. Pavel Nagorny
Angewandte Chemie International Edition 2013 Volume 52( Issue 49) pp:12932-12936
Publication Date(Web):
DOI:10.1002/anie.201304298
Co-reporter:Alina Borovika, Pavel Nagorny
Tetrahedron 2013 69(27–28) pp: 5719-5725
Publication Date(Web):
DOI:10.1016/j.tet.2013.03.086
Co-reporter:Dr. Enoch Mensah;Nicole Camasso;Will Kaplan ;Dr. Pavel Nagorny
Angewandte Chemie 2013 Volume 125( Issue 49) pp:13170-13174
Publication Date(Web):
DOI:10.1002/ange.201304298
Co-reporter:Alina Borovika;Pui-In Tang;Seth Klapman ;Dr. Pavel Nagorny
Angewandte Chemie 2013 Volume 125( Issue 50) pp:13666-13670
Publication Date(Web):
DOI:10.1002/ange.201307133
Co-reporter:Alina Borovika;Pui-In Tang;Seth Klapman ;Dr. Pavel Nagorny
Angewandte Chemie International Edition 2013 Volume 52( Issue 50) pp:13424-13428
Publication Date(Web):
DOI:10.1002/anie.201307133
Co-reporter:Zhankui Sun ; Grace A. Winschel ; Alina Borovika
Journal of the American Chemical Society 2012 Volume 134(Issue 19) pp:8074-8077
Publication Date(Web):April 30, 2012
DOI:10.1021/ja302704m
Catalytic enantioselective and diastereoselective spiroketalizations with BINOL-derived chiral phosphoric acids are reported. The chiral catalyst can override the inherent preference for the formation of thermodynamic spiroketals, and highly selective formation of nonthermodynamic spiroketals could be achieved under the reaction conditions.
Co-reporter:Nathan R. Cichowicz and Pavel Nagorny
Organic Letters 2012 Volume 14(Issue 4) pp:1058-1061
Publication Date(Web):January 31, 2012
DOI:10.1021/ol203431e
Selective metalation of sulfonylphosphonates results in sufficiently stable carbanions that undergo chemoselective Julia–Kocienski condensation with various aldehydes to provide (E)-allylic phosphonates in good yields and selectivities. The subsequent Horner–Wadsworth–Emmons condensation with aldehydes is used to synthesize various unsymmetrical trans-dienes, trienes, and tetraenes. This methodology is utilized for the concise synthesis of a naturally occurring fluorescent probe for membrane properties, β-parinaric acid.
Co-reporter:Yaroslav Ya. Khomutnyk; Alonso J. Argüelles; Grace A. Winschel; Zhankui Sun; Paul M. Zimmerman
Journal of the American Chemical Society () pp:
Publication Date(Web):December 7, 2015
DOI:10.1021/jacs.5b12528
Mechanistic and computational studies were conducted to elucidate the mechanism and the origins of enantiocontrol for asymmetric chiral phosphoric acid-catalyzed spiroketalization reactions. These studies were designed to differentiate between the SN1-like, SN2-like, and covalent phosphate intermediate-based mechanisms. The chiral phosphoric acid-catalyzed spiroketalization of deuterium-labeled cyclic enol ethers revealed a highly diastereoselective syn-selective protonation/nucleophile addition, thus ruling out long-lived oxocarbenium intermediates. Hammett analysis of the reaction kinetics revealed positive charge accumulation in the transition state (ρ = −2.9). A new computational reaction exploration method along with dynamics simulations supported an asynchronous concerted mechanism with a relatively short-lived polar transition state (average lifetime = 519 ± 240 fs), which is consistent with the observed inverse secondary kinetic isotope effect of 0.85. On the basis of these studies, a transition state model explaining the observed stereochemical outcome has been proposed. This model predicts the enantioselective formation of the observed enantiomer of the product with 92% ee, which matches the experimentally observed value.
Co-reporter:Bijay Bhattarai, Jia-Hui Tay and Pavel Nagorny
Chemical Communications 2015 - vol. 51(Issue 25) pp:NaN5401-5401
Publication Date(Web):2014/12/03
DOI:10.1039/C4CC08604J
A thiophosphoramide-based co-catalyst was found to significantly accelerate copper(II) trifluoromethanesulfonate-catalyzed arylation of potassium carboxylates with diaryliodonium salts. This effect could be attributed to counterion activation of diaryliodonium salts or organocopper intermediates by thiophosphoramides. Inclusion of thiophosphoramides permits achieving significantly milder reaction conditions and expands the scope of solvents and diaryliodonium counterions that could be used for the arylation of carboxylate nucleophiles.
R-3,3'-Bis(3,5-bis(methyl)phenyl)-1,1'-binaphthyl-2,2'-diyl hydrogenphosphate
Cyclohexanepropanal, 1-methyl-2,6-dioxo-
Benzenemethanol, 2-(3,4-dihydro-2H-pyran-6-yl)-
Benzoic acid, 2-(3,4-dihydro-2H-pyran-6-yl)-, methyl ester
4-Tributylstannyl-5H-furan-2-one
SPIRO[ISOBENZOFURAN-1(3H),2'-[2H]PYRAN], 3',4',5',6'-TETRAHYDRO-
Bis((S)-4-phenyl-4,5-dihydrooxazol-2-yl)methane