Ramon Vilar

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Organization: Imperial College London , England
Department: Department of Chemistry
Title: Professor(PhD)

TOPICS

Co-reporter:Agostino Cilibrizzi;Marina Fedorova;Juliet Collins;Robin Leatherbarrow;Rudiger Woscholski
Dalton Transactions 2017 vol. 46(Issue 21) pp:6994-7004
Publication Date(Web):2017/05/30
DOI:10.1039/C7DT00076F
The development of effective molecular probes to detect and image the levels of oxidative stress in cells remains a challenge. Herein we report the design, synthesis and preliminary biological evaluation of a novel optical probe to monitor oxidation of thiol groups in cysteine-based phosphatases (CBPs). Following orthogonal protecting approaches we synthesised a new vanadyl complex designed to bind to CBPs. This complex is functionalised with a well-known dimedone derivative (to covalently trap sulfenic acids, SOHs) and a coumarin-based fluorophore for optical visualization. We show that this new probe efficiently binds to a range of phosphatases in vitro with nanomolar affinity. Moreover, preliminary flow cytometry and microscopy studies in live HCT116 cells show that this probe can successfully image cellular levels of sulfenic acids – one of the species resulting from protein oxidative damage.
Co-reporter:Juliet Collins, Agostino Cilibrizzi, Marina Fedorova, Gillian Whyte, Lok Hang Mak, Inna Guterman, Robin Leatherbarrow, Rudiger Woscholski and Ramon Vilar  
Dalton Transactions 2016 vol. 45(Issue 16) pp:7104-7113
Publication Date(Web):16 Mar 2016
DOI:10.1039/C5DT04753F
Vanadium complexes have been previously utilised as potent inhibitors of cysteine based phosphatases (CBPs). Herein, we present the synthesis and characterisation of two new fluorescently labelled vanadyl complexes (14 and 15) with bridged di-picolinic acid ligands. These compounds differ significantly from previous vanadyl complexes with phosphatase inhibition properties in that the metal-chelating part is a single tetradentate unit, which should afford greater stability and scope for synthetic elaboration than the earlier complexes. These new complexes inhibit a selection of cysteine based phosphatases (CBPs) in the nM range with some selectivity. Fluorescence spectroscopic studies (including fluorescence anisotropy) were carried out to demonstrate that the complexes are not simply acting as vanadyl delivery vehicles but they interact with the proteins. Finally, we present preliminary fluorescence microscopy studies to demonstrate that the complexes are cell permeable and localise throughout the cytoplasm of NIH3T3 cells.
Co-reporter:Verity S. Stafford, Kogularamanan Suntharalingam, Arun Shivalingam, Andrew J. P. White, David J. Mann and Ramon Vilar  
Dalton Transactions 2015 vol. 44(Issue 8) pp:3686-3700
Publication Date(Web):17 Oct 2014
DOI:10.1039/C4DT02910K
A series of mono- and bi-metallic metal complexes (with CuII, PtII and ZnII) with substituted polypyridyl ligands have been prepared and their binding affinities towards quadruplex (c-Myc and human telomeric) and duplex DNA (ds26 and calf thymus) determined using fluorescent indicator displacement (FID) assays and UV/vis spectroscopic titrations. These studies have shown that the number of aromatic rings and number/position of cyclic amine substituents on the ligands, play an important role in defining the DNA binding abilities of the resulting metal complexes. We also show that bi-metallic complexes prepared using a novel terpyridine-cyclen ligand have higher affinity towards G-quadruplex DNA as compared to their mono-metallic counterparts. Cytotoxicity assays were carried out for all the new complexes against an osteosarcoma cancer cell line (U2OS) as well as a normal fibroblast cell line (GM05757). Several of these compounds displayed cytotoxicity similar to that of cisplatin.
Co-reporter:Nurul H. Abd Karim, Oscar Mendoza, Arun Shivalingam, Alexander J. Thompson, Sushobhan Ghosh, Marina K. Kuimova and Ramon Vilar  
RSC Advances 2014 vol. 4(Issue 7) pp:3355-3363
Publication Date(Web):03 Dec 2013
DOI:10.1039/C3RA44793F
A series of seven new metal complexes (metal = NiII, CuII, PtII and VO2+) with substituted salphen ligands have been prepared and their duplex and G-quadruplex DNA affinities determined. The selectivity of the complexes towards a given DNA topology is dictated by several factors including geometry, overall charge and substitution pattern of the complex. We also show that the two platinum(II)–salphen complexes developed as part of this series are emissive. Confocal microscopy studies were carried out with these two complexes using four different cell lines (CHO, HeLa, U2OS and HepG2). These studies showed that the cell permeability and localization are different for the two probes and highly dependent on the cell line used.
Co-reporter:Dr. Sushobhan Ghosh;Dr. Oscar Mendoza;Dr. Leticia Cubo;Dr. Frédéric Rosu;Dr. Valérie Gabelica;Dr. Andrew J. P. White; Dr. Ramon Vilar
Chemistry - A European Journal 2014 Volume 20( Issue 16) pp:4772-4779
Publication Date(Web):
DOI:10.1002/chem.201304905

Abstract

Two novel [2+2] metallo-assemblies based on a guanosine-substituted terpyridine ligand (1) coordinated to palladium(II) (2 a) and platinum(II) (2 b) are reported. These supramolecular assemblies have been fully characterized by NMR spectroscopy, ESI mass spectrometry and elemental analyses. The palladium(II) complex (2 a) has also been characterized by single crystal X-ray diffraction studies confirming that the system is a [2+2] metallo-rectangle in the solid state. The stabilities of these [2+2] assemblies in solution have been confirmed by DOSY studies as well as by variable temperature 1H NMR spectroscopy. The ability of these dinuclear complexes to interact with quadruplex and duplex DNA was investigated by fluorescent intercalator displacement (FID) assays, fluorescence resonance energy transfer (FRET) melting studies, and electrospray mass spectrometry (ESI-MS). These studies have shown that both these assemblies interact selectively with quadruplex DNA (human telomeric DNA and the G-rich promoter region of c-myc oncogene) over duplex DNA, and are able to induce dimerization of parallel G-quadruplex structures.

Co-reporter:Chris D. Moffat;Dr. Dominik J. Weiss;Arun Shivalingam;Dr. Andrew J. P. White;Dr. Pascal Salaün; Ramon Vilar
Chemistry - A European Journal 2014 Volume 20( Issue 51) pp:17168-17177
Publication Date(Web):
DOI:10.1002/chem.201404723

Abstract

A series of copper(II), nickel(II) and zinc(II) dimetallic complexes were prepared and their affinities towards arsenate investigated. Indicator displacement assays (IDAs) were carried out to establish the complexes with best affinities towards arsenate. A di-zinc complex (3) was selected and its arsenate-binding abilities investigated by isothermal titration calorimetry (ITC). The X-ray crystal structure of this metallo-receptor bound to arsenate is also reported, which allowed us to establish the binding mode between 3 and this oxyanion. Immobilising 3 onto HypoGel resin yielded a novel adsorbent (Zn–HypoGel) with high affinity for arsenate. Adsorption of arsenate from competitive solutions and natural groundwater was greater than that of the commercially used iron oxide Bayoxide E33. Zn–HypoGel could be efficiently and simply regenerated by washing with sodium acetate solution.

Co-reporter:Sushobhan Ghosh, Georg T. Silber, Andrew J. P. White, Neil Robertson and Ramon Vilar  
Dalton Transactions 2013 vol. 42(Issue 38) pp:13813-13816
Publication Date(Web):12 Aug 2013
DOI:10.1039/C3DT51845K
The synthesis of a terpyridine–guanosine ligand and its reaction with copper(II) to yield a new [2 + 2] metallo-rectangle is reported. The metallo-rectangle was characterized by single crystal X-ray diffraction and the structure showed significant intramolecular π–π stacking interactions between the two terpyridine moieties of the molecule. This prompted us to investigate the magnetic properties of the new di-copper(II) assembly which displayed ferromagnetic interactions in the solid state.
Co-reporter:Kogularamanan Suntharalingam, Oscar Mendoza, Alexandra A. Duarte, David J. Mann and Ramon Vilar  
Metallomics 2013 vol. 5(Issue 5) pp:514-523
Publication Date(Web):19 Feb 2013
DOI:10.1039/C3MT20252F
Cisplatin and some of its derivatives have been shown to be very successful anticancer agents. Their main mode of action has been proposed to be via covalent binding to DNA. However, one of the limitations of these drugs is their poor activity against some tumours due to intrinsic or acquired resistance. Therefore, there is interest in developing complexes with different binding modes and mode of action. Herein we present a novel platinum(II)–terpyridine complex (1) which interacts non-covalently with DNA and induces cell death via a different mechanism than cisplatin. The interaction of this complex with DNA was studied by UV/Vis spectroscopic titrations, fluorescent indicator displacement (FID) assays and circular dichroism (CD) titrations. In addition, computational docking studies were carried out with the aim of establishing the complex's binding mode. These experimental and computational studies showed the complex to have an affinity constant for DNA of ∼104 M−1, a theoretical free energy of binding of −10.83 kcal mol−1 and selectivity for the minor groove of DNA. Long-term studies indicated that 1 did not covalently bind (or nick) DNA. The cancer cell antiproliferative properties of this platinum(II) complex were probed in vitro against human and murine cell lines. Encouragingly the platinum(II) complex displayed selective toxicity for the cancerous (U2OS and SH-SY5Y) and proliferating NIH 3T3 cell lines. Further cell based studies were carried out to establish the mode of action. Cellular uptake studies demonstrated that the complex is able to penetrate the cell membrane and localize to the nucleus, implying that genomic DNA could be a cellular target. Detailed immunoblotting studies in combination with DNA-flow cytometry showed that the platinum(II) complex induced cell death in a manner consistent with necrosis.
Co-reporter:Dr. Philipp von Grebe;Dr. Kogularamanan Suntharalingam;Dr. Ramon Vilar;Dr. Pablo J. SanzMiguel;Dr. Sonja Herres-Pawlis; Dr. Bernhard Lippert
Chemistry - A European Journal 2013 Volume 19( Issue 34) pp:11429-11438
Publication Date(Web):
DOI:10.1002/chem.201301400

Abstract

The reaction of tetrakis(pyridine-2-yl)pyrazine (tppz) with 2 equiv of (2,2′-bpy)PtII in water yields two isomeric dinuclear cations, [{Pt(2,2′-bpy)}2(tppz)]4+, in which Pt coordination exclusively takes place through the two pairs of pyridine-2-yl nitrogen atoms. The two conformational isomers differ in their overall shape, with the formation of “Z” and “U” shapes, which are formed at 40 °C (Z isomer, 1) and under reflux conditions (U isomer, 2), respectively. X-ray crystal-structure analyses of the Z isomer, [{Pt(2,2′-bpy)}2(tppz)](PF6)43 CHCl34 H2O (1 a), and of the U isomer, [{Pt(2,2′-bpy)}2](PF6)42 CH3CN1.5 H2O (2 a), were carried out. Co-crystallization of compound 2 with PtCl2(2,2′-bpy) yielded [{Pt(2,2′-bpy)}2(tppz)](BF4)4⋅[PtCl2(2,2′-bpy)]4.5 H2O (3), in which the PtCl2(2,2′-bpy) entity was sandwiched between the two 2,2′-bpy faces of the U-shaped cation (2). Quantum chemical calculations revealed that the U isomer was more stable than the Z isomer, both in the gas phase and in an aqueous environment. These two isomers display different affinities toward duplex DNA and human telomeric quadruplex DNA (Htelo), as concluded from CD spectroscopy and FID assays. Thus, the U isomer binds significantly more strongly to quadruplex DNA (DC50=0.38 μM) than the Z isomer (DC50=8.50 μM).

Co-reporter:Nancy H. Campbell ; Nurul H. Abd Karim ; Gary N. Parkinson ; Mekala Gunaratnam ; Vanessa Petrucci ; Alan K. Todd ; Ramon Vilar ;Stephen Neidle
Journal of Medicinal Chemistry 2012 Volume 55(Issue 1) pp:209-222
Publication Date(Web):November 24, 2011
DOI:10.1021/jm201140v
The first X-ray crystal structures of nickel(II) and copper(II) salphen metal complexes bound to a quadruplex DNA are presented. Two structures have been determined and show that these salphen–metal complexes bind to human telomeric quadruplexes by end-stacking, with the metal in each case almost in line with the potassium ion channel. Quadruplex and duplex DNA binding is presented for these two and other related salphen complexes, all with side-chains terminating in pyrrolidino end-groups and differing patterns of substitution on the salphen core. The crystal structures are able to provide rationalizations for the structure–activity data, and in particular for the superior quadruplex-binding of the nickel complexes compared to that of the copper-containing ones. The complexes show significant antiproliferative activity for the compounds in a panel of cancer cell lines. They also show telomerase inhibitory activity in the telomerase TRAP-LIG assay.
Co-reporter:Dr. Kogularamanan Suntharalingam;Dr. Anna &x141;&x119;czkowska;Mona A. Furrer;Yilei Wu;Dr. Marina K. Kuimova;Dr. Bruno Therrien;Dr. Andrew J. P. White; Ramon Vilar
Chemistry - A European Journal 2012 Volume 18( Issue 51) pp:16277-16282
Publication Date(Web):
DOI:10.1002/chem.201202990
Co-reporter:Ramon Vilar
Transition Metal Chemistry 2012 Volume 37( Issue 7) pp:605-606
Publication Date(Web):2012 October
DOI:10.1007/s11243-012-9637-9
Co-reporter:Vicente Martí-Centelles, M. Isabel Burguete, Francisco Galindo, M. Angeles Izquierdo, D. Krishna Kumar, Andrew J.P. White, Santiago V. Luis, and Ramón Vilar
The Journal of Organic Chemistry 2012 Volume 77(Issue 1) pp:490-500
Publication Date(Web):November 11, 2011
DOI:10.1021/jo202077v
Two new pseudopeptidic molecules (one macrocyclic and one open chain) containing an acridine unit have been prepared. The fluorescence response of these receptors to a series of acids was measured in CHCl3. Receptors are selective to H2PO4– versus HSO4–, and an even higher selectivity is found over other anions such as Cl–, Br–, CH3COO–, and CF3COO–. We show that the macrocyclic receptor is more selective for H2PO4– than the related open chain receptor. The supramolecular interactions of triprotonated receptors with different anions have been modeled in silico and have been studied by different experimental techniques. Optimized geometries obtained by computational calculations agree well with experimental data, in particular fluorescence experiments, suggesting that the selective supramolecular interaction takes places through coordination of the anions to the triprotonated form of the receptor.
Co-reporter:Dr. Kogularamanan Suntharalingam;Douglas J. Hunt;Dr. Alexra A. Duarte;Dr. Andrew J. P. White;Dr. David J. Mann; Ramon Vilar
Chemistry - A European Journal 2012 Volume 18( Issue 47) pp:15133-15141
Publication Date(Web):
DOI:10.1002/chem.201202482

Abstract

A new disubstituted terpyridine ligand and the corresponding tri-copper(II) complex have been prepared and characterised. The binding affinity and binding mode of this tri-copper complex (as well as the previously reported mono- and di-copper analogues) towards duplex DNA were determined by using UV/Vis spectroscopic titrations and fluorescent indicator displacement (FID) assays. These studies showed the three complexes to bind moderately (in the order of 104M−1) to duplex DNA (ct-DNA and a 26-mer sequence). Furthermore, the number of copper centres and the nature of the substituents were found to play a significant role in defining the binding mode (intercalative or groove binding). The nuclease potential of the three complexes was investigated by using circular plasmid DNA as a substrate and analysing the products by agarose-gel electrophoresis. The cleaving activity was found to be dependent on the number of copper centres present (cleaving potency was in the order: tri-copper>di-copper>mono-copper). Interestingly, the tri-copper complex was able to cleave DNA without the need of external co-reductants. As this complex displayed the most promising nuclease properties, cell-based studies were carried out to establish if there was a direct link between DNA cleavage and cellular toxicity. The tri-copper complex displayed high cytotoxicity against four cancer cell lines. Of particular interest was that it displayed high cytotoxicity against the cisplatin-resistant MOLT-4 leukaemia cell line. Cellular uptake studies showed that the tri-copper complex was able to enter the cell and more importantly localise in the nucleus. Immunoblotting analysis (used to monitor changes in protein levels related to the DNA damage response pathway) and DNA-flow cytometric studies suggested that this tri-copper(II) complex is able to induce cellular DNA damage.

Co-reporter:Dr. Xiuqing Gong;Dr. Philip W. Miller; Antony D. Gee; Nicholas J. Long; Andrew J. de Mello; Ramon Vilar
Chemistry - A European Journal 2012 Volume 18( Issue 10) pp:2768-2772
Publication Date(Web):
DOI:10.1002/chem.201104059
Co-reporter:Andrew J. Surman, Gavin D. Kenny, D. Krishna Kumar, Jimmy D. Bell, Duncan R. Casey and Ramon Vilar  
Chemical Communications 2011 vol. 47(Issue 37) pp:10245-10247
Publication Date(Web):17 Aug 2011
DOI:10.1039/C1CC13284A
A graphical abstract is available for this content
Co-reporter:Vicente Martí-Centelles, D. Krishna Kumar, Andrew J. P. White, Santiago V. Luis and Ramon Vilar  
CrystEngComm 2011 vol. 13(Issue 23) pp:6997-7008
Publication Date(Web):11 Oct 2011
DOI:10.1039/C1CE05872J
Two new phenyl-bridged pseudopeptidic ligands have been prepared and structurally characterised. The nature of the ligands' substituents play an important role in the nature of the solid state structure yielding either hydrogen bonded linked sheets of molecules or infinite hydrogen bonded networks. Both these ligands were reacted with a range of zinc(II) salts with the aim of synthesising coordination polymers and networks and exploring the role that anions could play in determining the final structure. The crystal structures of four of these systems (with ZnSO4 and ZnBr2) were determined; in one case, a 3D coordination network was obtained where zinc–ligand coordination bonds generated the 3D arrangements. Three other 3D networks were obtained by anion-mediated hydrogen bonding of coordination 1D chains or 2D sheets. These four very different structures highlight the important role played by the ligands' substituents and the counteranions present in the system.
Co-reporter:Gabriella Buscemi, Philip W. Miller, Steven Kealey, Antony D. Gee, Nicholas J. Long, Jan Passchier and Ramon Vilar  
Organic & Biomolecular Chemistry 2011 vol. 9(Issue 9) pp:3499-3503
Publication Date(Web):25 Feb 2011
DOI:10.1039/C1OB05268C
Palladium dimers with sterically hindered phosphines have been shown to be excellent pre-catalysts for the aminocarbonylation of aryl halides to yield amides and one of them has been successfully employed as a pre-catalyst for the synthesis of 11C-radiolabelled amides for PET imaging.
Co-reporter:Dr. Andrew J. Surman;Dr. Célia S. Bonnet;Dr. Mark P. Lowe;Gavin D. Kenny; Jimmy D. Bell;Dr. Éva Tóth;Dr. Ramon Vilar
Chemistry - A European Journal 2011 Volume 17( Issue 1) pp:223-230
Publication Date(Web):
DOI:10.1002/chem.201001397

Abstract

This study shows that the relaxivity and optical properties of functionalised lanthanide-DTPA-bis-amide complexes (lanthanide=Gd3+ and Eu3+, DTPA=diethylene triamine pentaacetic acid) can be successfully modulated by addition of specific anions, without direct Ln3+/anion coordination. Zinc(II)-dipicolylamine moieties, which are known to bind strongly to phosphates, were introduced in the amide “arms” of these ligands, and the interaction of the resulting Gd–Zn2 complexes with a range of anions was screened by using indicator displacement assays (IDAs). Considerable selectivity for polyphosphorylated species (such as pyrophosphate and adenosine-5′-triphosphate (ATP)) over a range of other anions (including monophosphorylated anions) was apparent. In addition, we show that pyrophosphate modulates the relaxivity of the gadolinium(III) complex, this modulation being sufficiently large to be observed in imaging experiments. To establish the binding mode of the pyrophosphate and gain insight into the origin of the relaxometric modulation, a series of studies including UV/Vis and emission spectroscopy, luminescence lifetime measurements in H2O and D2O, 17O and 31P NMR spectroscopy and nuclear magnetic resonance dispersion (NMRD) studies were carried out.

Co-reporter:Emma S. Child;Savvas N. Georgiades;Kirsten N. Rose
Journal of Chemical Biology 2011 Volume 4( Issue 4) pp:159-165
Publication Date(Web):2011 October
DOI:10.1007/s12154-011-0059-5
Inhibition of protein kinases in the fight against disease remains a constant challenge for medicinal chemists, who have screened multitudes of predominantly planar organic scaffolds, natural and synthetic, to identify potent—albeit not always selective—kinase inhibitors. Herein, in an effort to investigate the potential biological utility of metal-based compounds as inhibitors against the cancer-relevant targets mitogen-activated protein kinase and cyclin-dependent kinase 2, we explore various parameters in planar platinum(II) complexes with substituted phenanthroline ligands and aliphatic diamine chelate co-ligands, to identify combinations that yield promising inhibitory activity. The individual ligands’ steric requirements as well as their pattern of hydrogen bond donors/acceptors appear to alter inhibitory potency when modulated.
Co-reporter:Savvas N. Georgiades;Lok Hang Mak
JBIC Journal of Biological Inorganic Chemistry 2011 Volume 16( Issue 2) pp:195-208
Publication Date(Web):2011 February
DOI:10.1007/s00775-010-0716-0
The discovery of small-molecule modulators of signaling pathways is currently a particularly active area of research. We aimed at developing unprecedented metal-based activators of Akt signaling which can potentially find applications as tools for regulating glucose metabolism downstream of Akt or serve as lead structures for developing antidiabetic drugs. In this context, a highly diverse library of 11 new zinc(II) complexes with phenolic, picolinic, pyridino, and hydroxamic ligands, all containing features beneficial for medicinal purposes, was prepared and screened in an assay that detected levels of phospho-Akt in lysates from NIH3T3 cells after treatment with the compounds. The complexes featuring hydroxamic ligands were found to be the most prominent activators of Akt among the molecules prepared, with the most efficient compound acting at submicromolar concentrations. Further characterization revealed that this compound induces phosphorylation of the Akt downstream effector glycogen synthase kinase 3β, but does not act as an inhibitor of tyrosine phosphatases or PTEN.
Co-reporter:Kogularamanan Suntharalingam ; Andrew J. P. White
Inorganic Chemistry 2010 Volume 49(Issue 18) pp:8371-8380
Publication Date(Web):August 26, 2010
DOI:10.1021/ic100884p
Twelve mono- and dimetallic complexes (the metals being CuII, PtII, and ZnII) with terpyridine-based ligands have been prepared and fully characterized. The X-ray crystal structures of two of the complexes (monometallic CuII and ZnII complexes with a morpholino-substituted terpyridine ligand) are reported. The affinities of the 12 complexes toward duplex and quadruplex (HTelo and c-myc) DNA have been investigated using a combination of techniques including fluorescent indicator displacement (FID) assay, UV−vis spectroscopy and circular dichroism (CD). These studies revealed that the dicopper and diplatinum complexes 11 and 12 bind very strongly to quadruplex DNA (up to K = 7.97 × 106 M−1) and with good selectivity (up to 100-fold) over duplex DNA. In these dimetallic complexes, one of the metals is coordinated to a terpyridine moiety yielding square based pyramidal (with CuII) or square planar (with PtII) geometries. The second metal is coordinated to a dipicolyl amine linked to terpyridine by a three-atom spacer. We propose that these complexes bind to quadruplex DNA via a combination of interactions: π−π end-stacking between the metal-terpyridine fragment and the guanine quartet, and electrostatic/metal-phosphate interactions (between the metal-dipicolyl amine fragment and DNA’s backbone).
Co-reporter:Jonathan Martinelli, Beeta Balali-Mood, Rachael Panizzo, Mark F. Lythgoe, Andrew J. P. White, Patrizia Ferretti, Joachim H. G. Steinke and Ramon Vilar  
Dalton Transactions 2010 vol. 39(Issue 42) pp:10056-10067
Publication Date(Web):28 Sep 2010
DOI:10.1039/C0DT00815J
Three different tetraazamacrocyclic ligands containing four amide substituents that feature groups (namely allyl, styryl and propargyl groups) suitable for polymerisation have been synthesised. Gadolinium(III) complexes of these three ligands have been prepared as potential monomers for the synthesis of polymeric MRI contrast agents. To assess the potential of these monomers as MRI contrast agents, their relaxation enhancement properties and cytotoxicity have been determined. A europium(III) complex of one of these ligands (with propargyl substituents) is also presented together with its PARACEST properties. In addition, to gain further insight into the coordination chemistry of the tetra-propargyl substituted ligand, the corresponding zinc(II) and cadmium(II) complexes have been prepared. The X-ray crystal structures of the tetra-propargyl ligand and its corresponding gadolinium(III), zinc(II) and cadmium(II) complexes are also presented.
Co-reporter:Xiaoming He Dr.;Ferno Herranz Dr.;EddieChung-Chin Cheng Dr. Dr.;VivianWing-Wah Yam Dr.
Chemistry - A European Journal 2010 Volume 16( Issue 30) pp:9123-9131
Publication Date(Web):
DOI:10.1002/chem.201000647

Abstract

A series of bis(dicyclohexylphosphino)methane (dcpm)-containing gold(I) thiolate complexes with urea receptors, 13, has been successfully designed and synthesized, and their photophysical and anion-binding properties have been studied. The linker between the thiolate and the urea group, and the electronic environment of the urea moiety, have been found to exert a great influence on the photophysical and anion-binding properties of the complexes. Complex 3 displays an intense long-lived orange-red luminescence at around 620 nm in the solid state and in the glass state at 77 K, which is considerably red shifted from the band seen in a solution of dichloromethane at room temperature, suggesting the presence of Au⋅⋅⋅Au interactions. Upon introducing an electron-withdrawing NO2 group, complex 1 was found to show high selectivity and sensitivity for F through a drastic color change from yellow to red. The anion-binding constants of the complexes have been determined from electronic absorption and 1H NMR spectroscopy titration studies and the data were found to fit well to a 1:1 binding model for the interactions between the complexes and the anions. Complexes 1 and 2 show the same anion selectivity trend of F>AcO>H2PO4>Cl≈Br≈I, which is consistent with the trend in anion basicity. In addition, complex 1 has been shown to exhibit higher binding affinity for anions compared with those of complexes 2 and 3, probably due to the higher acidity of the urea moiety as a result of the introduction of the NO2 group.

Co-reporter:SavvasN. Georgiades Dr.;NurulH. AbdKarim;Kogularamanan Suntharalingam Dr.
Angewandte Chemie International Edition 2010 Volume 49( Issue 24) pp:4020-4034
Publication Date(Web):
DOI:10.1002/anie.200906363

Abstract

Guanine-rich sequences of DNA can assemble into tetrastranded structures known as G-quadruplexes. It has been suggested that these secondary DNA structures could be involved in the regulation of several key biological processes. In the human genome, guanine-rich sequences with the potential to form G-quadruplexes exist in the telomere as well as in promoter regions of certain oncogenes. The identification of these sequences as novel targets for the development of anticancer drugs has sparked great interest in the design of molecules that can interact with quadruplex DNA. While most reported quadruplex DNA binders are based on purely organic templates, numerous metal complexes have more recently been shown to interact effectively with this DNA secondary structure. This Review provides an overview of the important roles that metal complexes can play as quadruplex DNA binding molecules, highlighting the unique properties metals can confer to these molecules.

Co-reporter:SavvasN. Georgiades Dr.;NurulH. AbdKarim;Kogularamanan Suntharalingam Dr.
Angewandte Chemie 2010 Volume 122( Issue 24) pp:4114-4128
Publication Date(Web):
DOI:10.1002/ange.200906363

Abstract

Guaninreiche DNA-Sequenzen können sich zu viersträngigen Aggregaten anordnen, die als G-Quadruplexe bezeichnet werden. Man nimmt an, dass diese DNA-Sekundärstrukturen an der Regulation verschiedener biologischer Schlüsselprozesse beteiligt sind. Im menschlichen Genom kommen guaninreiche Sequenzen mit dem Potenzial zur Bildung von G-Quadruplexen beispielsweise im Telomer sowie in den Promoterregionen bestimmter Onkogene vor. Die Identifizierung dieser Sequenzen als neue Zielstrukturen für Tumortherapeutika hat großes Interesse an der Entwicklung von Verbindungen ausgelöst, die mit Quadruplex-DNA wechselwirken können. Die meisten bekannten Quadruplex-DNA-Bindungssubstanzen beruhen zwar auf rein organischen Templaten, später wurde aber nachgewiesen, dass auch viele Metallkomplexe mit dieser DNA-Sekundärstruktur effiziente Wechselwirkungen eingehen. Dieser Aufsatz gibt einen Überblick über die wichtigen Funktionen, die Metallkomplexe als Quadruplex-DNA-Bindungssubstanzen haben können, und diskutiert die besonderen Eigenschaften von Metallzentren auf diese Verbindungen.

Co-reporter:Kogularamanan Suntharalingam;Deepali Gupta Dr.;PabloJ. SanzMiguel Dr.;Bernhard Lippert Dr. Dr.
Chemistry - A European Journal 2010 Volume 16( Issue 12) pp:3613-3616
Publication Date(Web):
DOI:10.1002/chem.200903501
Co-reporter:Kogularamanan Suntharalingam, Andrew J. P. White and Ramon Vilar
Inorganic Chemistry 2009 Volume 48(Issue 19) pp:9427-9435
Publication Date(Web):September 3, 2009
DOI:10.1021/ic901319n
Three new substituted terpyridine ligands and their corresponding platinum(II) complexes have been prepared and fully characterized (including the X-ray crystal structures of two of the complexes). These compounds have shown to stack via π−π interactions both in the solid state and in solution. The interactions of these compounds with quadruplex DNA (both HTelo and c-myc sequences) have been studied by fluorescent indicator displacement (FID) assays, surface plasmon resonance (SPR), and in one case by circular dichroism (CD). The complexes have shown to interact strongly with quadruplex DNA (with binding constants of ca. 106 and DC50 values between 2.24 and 0.26, as determined by SPR and FID, respectively). We have also investigated the interaction between the complexes and a sequence of duplex DNA to gain some insight into the selectivity of the compounds for quadruplex structures. FID and SPR studies have shown that the complexes have a modest selectivity (1 order of magnitude) for quadruplex, particularly c-myc, versus duplex DNA.
Co-reporter:Carolina Mendoza, Jordi Benet-Buchholz, Miquel A. Pericás and Ramón Vilar  
Dalton Transactions 2009 (Issue 16) pp:2974-2985
Publication Date(Web):04 Mar 2009
DOI:10.1039/B819612E
The new di-platinum(II) thiolato-bridged complexes [(dppp)Pt{μ-S(CH2)nNHC(O)NHR}]2(OTf)2 (n = 2, 3; R = Et, Ph) have been synthesized. The X-ray crystal structures of three of these complexes have confirmed their formulation and highlighted the ability of the urea groups on the thiolato bridges to display hydrogen bonding interactions with anions. The binding of anions by these receptors has been quantitatively determined by 1H NMR spectroscopy and in a qualitative fashion by indicator displacement assays. These studies have shown the receptors to be selective for inorganic phosphate. In addition we have isolated and structurally characterized an unusual 1D coordination polymer with formula {[(dppp)Pt{μ-S(CH2)2NHC(O)NHR}][Pb2Cl6]}n. The X-ray crystal structure of this inorganic polymer has shown that it consists of units of the di-platinum-thiolato cations bridged by [Pb2Cl6]2− moieties.
Co-reporter:Julie E. Reed, Andrew J. P. White, Stephen Neidle and Ramón Vilar  
Dalton Transactions 2009 (Issue 14) pp:2558-2568
Publication Date(Web):12 Feb 2009
DOI:10.1039/B820086F
A series of new mono-carboxamido phenanthrolines and bis-carboxamido pyridines have been prepared and their coordination chemistry to platinum(II) and palladium(II) investigated. Both the ligands and metal complexes have been designed with the appropriate geometric requirements to favour π–π interactions with guanine quartets, which are the core motif in quadruplex structures formed by folding single-stranded telomeric DNA. The interactions of these compounds with quadruplex-DNA have been investigated. The results show that some of these compounds induce the stabilisation of quadruplex-DNA (e.g. ΔTm at 1 μM of 20 °C for one of the platinum(II) complexes) while there is no measurable interaction with duplex DNA at similar concentrations. In addition, the important role played by the metal centre in increasing the interaction of these planar molecules with quadruplex-DNA is highlighted.
Co-reporter:Nicolas P. E. Barry, Nurul H. Abd Karim, Ramón Vilar and Bruno Therrien  
Dalton Transactions 2009 (Issue 48) pp:10717-10719
Publication Date(Web):10 Aug 2009
DOI:10.1039/B913642H
The interactions of four octacationic ruthenium coordination cubes with duplex and quadruplex (telomeric and c-myc) DNA have been studied by FID and SPR, showing these cubes to bind strongly to tetrastranded DNA structures.
Co-reporter:Gareth R. Owen, Andrew J. P. White and Ramon Vilar
Organometallics 2009 Volume 28(Issue 19) pp:5783-5793
Publication Date(Web):September 8, 2009
DOI:10.1021/om900574b
The syntheses and characterization of a number of palladium complexes containing imine and/or iminoacyl groups are reported. Our strategies toward the insertion of imines into palladium iminoacyl complexes are outlined. The imine complexes [Pd(Me)(L2){N(R′)═C(H)Ph}]X (where L2 = dppe, dppp, dppf; R′ = Ph, Me, Bz; and X = BF4 or OTf) were prepared and fully characterized. [Pd(Me)(dppe){N(Ph)═C(H)Ph}]BF4 (1) and [Pd(Me)(dppp){N(Ph)═C(H)Ph}]OTf (4) were structurally characterized by X-ray crystallography. The iminoacyl-imine complexes [Pd{C(Me)═NXyl} (L2){N═C(Me)OCH2CH2}]BF4 (L2 = dppe, 12; dppp, 13) were prepared. The bis-imine complex [Pd(dppe){N═C(Me)OCH2CH2}2][BF4]2 (14) resulting from disproportionation of 12 was also prepared and structurally characterized. Protonation of the iminoacyl fragment provided iminoacyl imine complex [Pd{C(CH3)═N(H)Xyl}(dppe){N(Bz)═CPhH}][BF4]2 (17), which was sufficiently stable to be structurally characterized, providing some insight into the coordination of these fragments to palladium.
Co-reporter:Anna Arola-Arnal, Jordi Benet-Buchholz, Stephen Neidle and Ramón Vilar
Inorganic Chemistry 2008 Volume 47(Issue 24) pp:11910-11919
Publication Date(Web):November 19, 2008
DOI:10.1021/ic8016547
A series of square-planar and square-based pyramidal metal complexes (metal = Ni2+, Cu2+, Zn2+, and V4+) with salphen and salen derivatives as ligands have been prepared. The X-ray crystal structures of three of these complexes are reported, giving insight into the geometric properties of the compounds. The interactions of these complexes with duplex and human telomeric quadruplex DNA have been studied by fluorescence resonance energy transfer (FRET), fluorescent intercalator displacement assay, and in one case circular dichroism. These studies have shown the square-planar metal complexes to be excellent quadruplex DNA stabilizers. In addition, FRET competition assays have shown the complexes to have a high degree of selectivity for the DNA quadruplex versus duplex DNA. These studies have allowed us to establish the most important features that metal complexes should have to interact selectively with quadruplex DNA. This will be of value in defining the best strategy to prepare metal complexes as potential anticancer drugs.
Co-reporter:Ramon Vilar
European Journal of Inorganic Chemistry 2008 Volume 2008( Issue 3) pp:357-367
Publication Date(Web):
DOI:10.1002/ejic.200701017

Abstract

The selective recognition of anionic species by molecular receptors is an area of increasing interest due to the important roles played by anions in biological systems and the environment. An attractive approach for the recognition of anions is to use metal-based receptors, which provides some important advantages over purely organic hosts. Metallo-hosts can combine the structural and functional properties of metal centres with the recognition capabilities of organic ligands to selectively bind anionic guests. In our group we have developed different approaches for the synthesis of this type of metallo-receptors. One of these approaches is based on the use of the anion of interest as a templating agent to link together different organic and metal-containing building blocks into assemblies that have high selectivity for the templating anion. This microreview aims to give an overview of the research carried out in the author's group in this area over the past few years. Relevant examples from other groups are discussed and, where appropriate, compared to the work carried out in our group.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2008)

Co-reporter:Ramon Vilar
European Journal of Inorganic Chemistry 2008 Volume 2008( Issue 3) pp:
Publication Date(Web):
DOI:10.1002/ejic.200890000

Abstract

Cover Picture: Metalloreceptors for the molecular recognition of anions or anion templates for the synthesis of metalloreceptors? Both! This figure shows the crystal structures of two metallohosts with the corresponding anionic guest “trapped” within the hydrogen-bonding clefts. In one case (structure shown at the top), the complex was prepared without the need for an anion template. Once formed, this dipalladium complex with urea-containing ligands binds a range of different anions in competing solvents. The structure shown at the bottom of the figure is that of a tetrametallohost, which only forms in the presence of the appropriate anionic template. This microreview on p. 357 ff aims to give an overview of the research carried out in the author's group in the area of anion recognition and templation in coordination chemistry.

Co-reporter:Nélida Gimeno;Xiaoe Li;JamesR. Durrant ;Ramón Vilar
Chemistry - A European Journal 2008 Volume 14( Issue 10) pp:3006-3012
Publication Date(Web):
DOI:10.1002/chem.200700412

Abstract

The synthesis of two new azo phenyl thiourea compounds and their optical response to different anions is reported herein. Solution studies in methanol indicate that cyanide induces a colour change in these dyes (whereas no changes are observed in the presence of other anions, such as F, Cl, Br, CH3COO, H2PO4, HSO4). Interestingly, in DMSO these dyes are responsive not only to cyanide, but also to fluoride, acetate and dihydrogen phosphate. Each of these anions induces a different colour change. In the second part of the paper, we report the attachment of one of these dyes onto nanostructured TiO2 and Al2O3 films. The stability of these sensitised films to pH was studied and we concluded that the sensitised Al2O3 films are more robust, and hence, better than the TiO2 for anion sensing. The dye-sensitised Al2O3 films were immersed in solutions of different anions and their response studied. The films can detect cyanide down to 3 ppm in aqueous solution with relatively good selectivity over other anions.

Co-reporter:Julie E. Reed, Stephen Neidle and Ramon Vilar  
Chemical Communications 2007 (Issue 42) pp:4366-4368
Publication Date(Web):13 Aug 2007
DOI:10.1039/B709898G
Two new mono-substituted phenanthroline ligands and their platinum(II) square planar complexes have been prepared; one of the complexes has been shown to induce a high degree of quadruplex DNA stabilisation and to inhibit telomerase.
Co-reporter:Pilar Diaz, Jorge A. Tovilla, Pablo Ballester, Jordi Benet-Buchholz and Ramón Vilar  
Dalton Transactions 2007 (Issue 32) pp:3516-3525
Publication Date(Web):29 Jun 2007
DOI:10.1039/B703660D
The reactions between [Pd(P–P)(OTf)2] (where P–P = dppp or dppf) and two different bipyridyl ligands (L1 = 1,3-bis(4-pyridylmethyl)urea and L2 = 1,3- bis(pyridinylmethyl)benzenedicarboxamide) containing hydrogen-bonding units have been studied. The X-ray crystal structures of three of these assemblies have been solved showing them to be the [2 + 2] metallo-macrocycles [Pd(P–P)(Ln)]2(OTf)4 [P–P = dppp, n = 1, (1); P–P = dppp, n = 2, (2); P–P = dppf, n = 1, (3)]. To confirm whether the dimeric assembly of one of these species (1) is retained in solution, several investigations have been carried out. 1H NMR studies in DMSO and high resolution ESI mass spectrometry have shown that 1 is in equilibrium with a larger [3 + 3] metallo-macrocycle. The equilibrium between these two species can be modified by changing the temperature, concentration or solvent. Also, addition of certain anions (e.g. [H2PO4]–) to the mixture shifts the equilibrium favoring the formation of the [2 + 2] metallo-macrocycle over the [3 + 3] (initially present in a larger proportion).
Co-reporter:Nélida Gimeno;Pilar Formentín;Joachim H. G. Steinke;Ramón Vilar
European Journal of Organic Chemistry 2007 Volume 2007(Issue 6) pp:918-924
Publication Date(Web):19 DEC 2006
DOI:10.1002/ejoc.200600908

A systematic study of the ruthenium-catalysed metathesis of alkenes containing hydrogen-bonding substituents (namely urea and thiourea groups) is presented. Under standard metathesis conditions, several of the substrates under study undergo alkene isomerisation instead of the targeted metathesis. However, in the course of these investigations it has been established that this unwanted isomerisation process can be suppressed by addition of phenylphosphoric acid to the reaction mixture. Some other potential isomerisation inhibitors (e.g. benzoic acid and salts of phosphoric acid) have been studied and their performance compared to that of phenylphosphoric acid. To extend the scope of phenylphosphoric acid, we also studied the metathesis of 1,3-diallylurea. Interestingly, not only did we observe the complete suppression of the isomerisation process, but also that it is possible to obtain instead of the ring-closing metathesis (RCM) product,ADMET oligomers resulting from the cross-metathesis of diallylurea at higher concentrations. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2007)

Co-reporter:Hayley A. Burkill, Ramón Vilar, Andrew J.P. White
Inorganica Chimica Acta 2006 Volume 359(Issue 11) pp:3709-3722
Publication Date(Web):1 August 2006
DOI:10.1016/j.ica.2006.01.020
A series of ruthenium and rhodium complexes with a urea–disubstituted pyridine ligand are reported. The X-ray crystal structures of three of these species, RuCl2(L1)(PPh3) (1), [Ru(MeCN)2(L1)(PPh3)][BF4]2 (3) and Rh(CH2Cl)Cl2(L1) (9) (where L1 = N,N′-(2,2′-(1E,1′E)-(1,1′-(pyridine-2,6-diyl)bis(ethan-1-yl-1-ylidene))bis(azan-1-yl-1-ylidene)bis(ethane-2,1-diyl))diacetamide) have shown that the disubstituted pyridine acts as a tridentate ligand and its urea substituents engage in hydrogen bonding interactions with species coordinated to the metal centres. The reactivity of the ruthenium complexes towards coordination of other anions such as NCS− has been investigated, as well as the oxidative-addition of alkyl chlorides to rhodium(I) centres (to yield species such as 9).A series of ruthenium and rhodium complexes with urea- and amide-disubstituted pyridine ligands have been prepared. X-ray crystal structure of some of these complexes have demonstrated that in the solid state the amide substituents of the ligands are engaged in hydrogen-bonding with species coordinated to the metal centre. This could provide interesting possibilities for the activation of small molecules in the coordination sphere of metal complexes.
Co-reporter:Ute Christmann, Ramón Vilar, Andrew J. P. White and David J. Williams  
Chemical Communications 2004 (Issue 11) pp:1294-1295
Publication Date(Web):05 May 2004
DOI:10.1039/B402283A
Two novel palladium(I) dinuclear complexes have been prepared and their structural characterization has revealed an unprecedented μ2-η3:η3 coordination between a phenyl ring from PtBu2Bph (Bph = Biphenyl) and the PdI–PdI unit present in the complexes.
Co-reporter:Pilar Diaz, Jorge A. Tovilla, Pablo Ballester, Jordi Benet-Buchholz and Ramón Vilar
Dalton Transactions 2007(Issue 32) pp:NaN3525-3525
Publication Date(Web):2007/06/29
DOI:10.1039/B703660D
The reactions between [Pd(P–P)(OTf)2] (where P–P = dppp or dppf) and two different bipyridyl ligands (L1 = 1,3-bis(4-pyridylmethyl)urea and L2 = 1,3- bis(pyridinylmethyl)benzenedicarboxamide) containing hydrogen-bonding units have been studied. The X-ray crystal structures of three of these assemblies have been solved showing them to be the [2 + 2] metallo-macrocycles [Pd(P–P)(Ln)]2(OTf)4 [P–P = dppp, n = 1, (1); P–P = dppp, n = 2, (2); P–P = dppf, n = 1, (3)]. To confirm whether the dimeric assembly of one of these species (1) is retained in solution, several investigations have been carried out. 1H NMR studies in DMSO and high resolution ESI mass spectrometry have shown that 1 is in equilibrium with a larger [3 + 3] metallo-macrocycle. The equilibrium between these two species can be modified by changing the temperature, concentration or solvent. Also, addition of certain anions (e.g. [H2PO4]–) to the mixture shifts the equilibrium favoring the formation of the [2 + 2] metallo-macrocycle over the [3 + 3] (initially present in a larger proportion).
Co-reporter:Carolina Mendoza, Jordi Benet-Buchholz, Miquel A. Pericás and Ramón Vilar
Dalton Transactions 2009(Issue 16) pp:NaN2985-2985
Publication Date(Web):2009/03/04
DOI:10.1039/B819612E
The new di-platinum(II) thiolato-bridged complexes [(dppp)Pt{μ-S(CH2)nNHC(O)NHR}]2(OTf)2 (n = 2, 3; R = Et, Ph) have been synthesized. The X-ray crystal structures of three of these complexes have confirmed their formulation and highlighted the ability of the urea groups on the thiolato bridges to display hydrogen bonding interactions with anions. The binding of anions by these receptors has been quantitatively determined by 1H NMR spectroscopy and in a qualitative fashion by indicator displacement assays. These studies have shown the receptors to be selective for inorganic phosphate. In addition we have isolated and structurally characterized an unusual 1D coordination polymer with formula {[(dppp)Pt{μ-S(CH2)2NHC(O)NHR}][Pb2Cl6]}n. The X-ray crystal structure of this inorganic polymer has shown that it consists of units of the di-platinum-thiolato cations bridged by [Pb2Cl6]2− moieties.
Co-reporter:Gabriella Buscemi, Philip W. Miller, Steven Kealey, Antony D. Gee, Nicholas J. Long, Jan Passchier and Ramon Vilar
Organic & Biomolecular Chemistry 2011 - vol. 9(Issue 9) pp:NaN3503-3503
Publication Date(Web):2011/02/25
DOI:10.1039/C1OB05268C
Palladium dimers with sterically hindered phosphines have been shown to be excellent pre-catalysts for the aminocarbonylation of aryl halides to yield amides and one of them has been successfully employed as a pre-catalyst for the synthesis of 11C-radiolabelled amides for PET imaging.
Co-reporter:Sushobhan Ghosh, Georg T. Silber, Andrew J. P. White, Neil Robertson and Ramon Vilar
Dalton Transactions 2013 - vol. 42(Issue 38) pp:NaN13816-13816
Publication Date(Web):2013/08/12
DOI:10.1039/C3DT51845K
The synthesis of a terpyridine–guanosine ligand and its reaction with copper(II) to yield a new [2 + 2] metallo-rectangle is reported. The metallo-rectangle was characterized by single crystal X-ray diffraction and the structure showed significant intramolecular π–π stacking interactions between the two terpyridine moieties of the molecule. This prompted us to investigate the magnetic properties of the new di-copper(II) assembly which displayed ferromagnetic interactions in the solid state.
Co-reporter:Juliet Collins, Agostino Cilibrizzi, Marina Fedorova, Gillian Whyte, Lok Hang Mak, Inna Guterman, Robin Leatherbarrow, Rudiger Woscholski and Ramon Vilar
Dalton Transactions 2016 - vol. 45(Issue 16) pp:NaN7113-7113
Publication Date(Web):2016/03/16
DOI:10.1039/C5DT04753F
Vanadium complexes have been previously utilised as potent inhibitors of cysteine based phosphatases (CBPs). Herein, we present the synthesis and characterisation of two new fluorescently labelled vanadyl complexes (14 and 15) with bridged di-picolinic acid ligands. These compounds differ significantly from previous vanadyl complexes with phosphatase inhibition properties in that the metal-chelating part is a single tetradentate unit, which should afford greater stability and scope for synthetic elaboration than the earlier complexes. These new complexes inhibit a selection of cysteine based phosphatases (CBPs) in the nM range with some selectivity. Fluorescence spectroscopic studies (including fluorescence anisotropy) were carried out to demonstrate that the complexes are not simply acting as vanadyl delivery vehicles but they interact with the proteins. Finally, we present preliminary fluorescence microscopy studies to demonstrate that the complexes are cell permeable and localise throughout the cytoplasm of NIH3T3 cells.
Co-reporter:Andrew J. Surman, Gavin D. Kenny, D. Krishna Kumar, Jimmy D. Bell, Duncan R. Casey and Ramon Vilar
Chemical Communications 2011 - vol. 47(Issue 37) pp:NaN10247-10247
Publication Date(Web):2011/08/17
DOI:10.1039/C1CC13284A
A graphical abstract is available for this content
Co-reporter:Julie E. Reed, Andrew J. P. White, Stephen Neidle and Ramón Vilar
Dalton Transactions 2009(Issue 14) pp:NaN2568-2568
Publication Date(Web):2009/02/12
DOI:10.1039/B820086F
A series of new mono-carboxamido phenanthrolines and bis-carboxamido pyridines have been prepared and their coordination chemistry to platinum(II) and palladium(II) investigated. Both the ligands and metal complexes have been designed with the appropriate geometric requirements to favour π–π interactions with guanine quartets, which are the core motif in quadruplex structures formed by folding single-stranded telomeric DNA. The interactions of these compounds with quadruplex-DNA have been investigated. The results show that some of these compounds induce the stabilisation of quadruplex-DNA (e.g. ΔTm at 1 μM of 20 °C for one of the platinum(II) complexes) while there is no measurable interaction with duplex DNA at similar concentrations. In addition, the important role played by the metal centre in increasing the interaction of these planar molecules with quadruplex-DNA is highlighted.
Co-reporter:Verity S. Stafford, Kogularamanan Suntharalingam, Arun Shivalingam, Andrew J. P. White, David J. Mann and Ramon Vilar
Dalton Transactions 2015 - vol. 44(Issue 8) pp:NaN3700-3700
Publication Date(Web):2014/10/17
DOI:10.1039/C4DT02910K
A series of mono- and bi-metallic metal complexes (with CuII, PtII and ZnII) with substituted polypyridyl ligands have been prepared and their binding affinities towards quadruplex (c-Myc and human telomeric) and duplex DNA (ds26 and calf thymus) determined using fluorescent indicator displacement (FID) assays and UV/vis spectroscopic titrations. These studies have shown that the number of aromatic rings and number/position of cyclic amine substituents on the ligands, play an important role in defining the DNA binding abilities of the resulting metal complexes. We also show that bi-metallic complexes prepared using a novel terpyridine-cyclen ligand have higher affinity towards G-quadruplex DNA as compared to their mono-metallic counterparts. Cytotoxicity assays were carried out for all the new complexes against an osteosarcoma cancer cell line (U2OS) as well as a normal fibroblast cell line (GM05757). Several of these compounds displayed cytotoxicity similar to that of cisplatin.
Co-reporter:Julie E. Reed, Stephen Neidle and Ramon Vilar
Chemical Communications 2007(Issue 42) pp:NaN4368-4368
Publication Date(Web):2007/08/13
DOI:10.1039/B709898G
Two new mono-substituted phenanthroline ligands and their platinum(II) square planar complexes have been prepared; one of the complexes has been shown to induce a high degree of quadruplex DNA stabilisation and to inhibit telomerase.
Co-reporter:Jonathan Martinelli, Beeta Balali-Mood, Rachael Panizzo, Mark F. Lythgoe, Andrew J. P. White, Patrizia Ferretti, Joachim H. G. Steinke and Ramon Vilar
Dalton Transactions 2010 - vol. 39(Issue 42) pp:NaN10067-10067
Publication Date(Web):2010/09/28
DOI:10.1039/C0DT00815J
Three different tetraazamacrocyclic ligands containing four amide substituents that feature groups (namely allyl, styryl and propargyl groups) suitable for polymerisation have been synthesised. Gadolinium(III) complexes of these three ligands have been prepared as potential monomers for the synthesis of polymeric MRI contrast agents. To assess the potential of these monomers as MRI contrast agents, their relaxation enhancement properties and cytotoxicity have been determined. A europium(III) complex of one of these ligands (with propargyl substituents) is also presented together with its PARACEST properties. In addition, to gain further insight into the coordination chemistry of the tetra-propargyl substituted ligand, the corresponding zinc(II) and cadmium(II) complexes have been prepared. The X-ray crystal structures of the tetra-propargyl ligand and its corresponding gadolinium(III), zinc(II) and cadmium(II) complexes are also presented.
Co-reporter:Agostino Cilibrizzi, Marina Fedorova, Juliet Collins, Robin Leatherbarrow, Rudiger Woscholski and Ramon Vilar
Dalton Transactions 2017 - vol. 46(Issue 21) pp:NaN7004-7004
Publication Date(Web):2017/05/08
DOI:10.1039/C7DT00076F
The development of effective molecular probes to detect and image the levels of oxidative stress in cells remains a challenge. Herein we report the design, synthesis and preliminary biological evaluation of a novel optical probe to monitor oxidation of thiol groups in cysteine-based phosphatases (CBPs). Following orthogonal protecting approaches we synthesised a new vanadyl complex designed to bind to CBPs. This complex is functionalised with a well-known dimedone derivative (to covalently trap sulfenic acids, SOHs) and a coumarin-based fluorophore for optical visualization. We show that this new probe efficiently binds to a range of phosphatases in vitro with nanomolar affinity. Moreover, preliminary flow cytometry and microscopy studies in live HCT116 cells show that this probe can successfully image cellular levels of sulfenic acids – one of the species resulting from protein oxidative damage.
Co-reporter:Nicolas P. E. Barry, Nurul H. Abd Karim, Ramón Vilar and Bruno Therrien
Dalton Transactions 2009(Issue 48) pp:NaN10719-10719
Publication Date(Web):2009/08/10
DOI:10.1039/B913642H
The interactions of four octacationic ruthenium coordination cubes with duplex and quadruplex (telomeric and c-myc) DNA have been studied by FID and SPR, showing these cubes to bind strongly to tetrastranded DNA structures.
1-Propen-1-ol, phenylcarbamate
2,6-Pyridinedicarboxamide, N,N'-di-2-pyridinyl-
3-Hexenediamide, N,N'-diphenyl-
1,10-Phenanthroline, 2-(2-pyridinyl)-
Piperidine, 1-(1H-indol-5-ylcarbonyl)-
Mercury, bis[(4-methylphenyl)ethynyl]-
BENZAMIDE, N,N'-2-BUTENE-1,4-DIYLBIS-
BENZAMIDE, 4-CYANO-N-(PHENYLMETHYL)-
2-HEXENEDIAMIDE, N,N'-DIPHENYL-
1,10-PHENANTHROLINE-2,9-DICARBONYL DICHLORIDE