Lu Shin Wong

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Organization: University of Manchester , England
Department: Manchester Institute of Biotechnology
Title: Lecture(PhD)
Co-reporter:S. Yasin Tabatabaei Dakhili;Peter Quayle;Stephanie A. Caslin;Abayomi S. Faponle;Sam P. de Visser
PNAS 2017 Volume 114 (Issue 27 ) pp:E5285-E5291
Publication Date(Web):2017-07-03
DOI:10.1073/pnas.1613320114
The family of silicatein enzymes from marine sponges (phylum Porifera) is unique in nature for catalyzing the formation of inorganic silica structures, which the organisms incorporate into their skeleton. However, the synthesis of organosiloxanes catalyzed by these enzymes has thus far remained largely unexplored. To investigate the reactivity of these enzymes in relation to this important class of compounds, their catalysis of Si–O bond hydrolysis and condensation was investigated with a range of model organosilanols and silyl ethers. The enzymes’ kinetic parameters were obtained by a high-throughput colorimetric assay based on the hydrolysis of 4-nitrophenyl silyl ethers. These assays showed unambiguous catalysis with kcat/Km values on the order of 2–50 min−1 μM−1. Condensation reactions were also demonstrated by the generation of silyl ethers from their corresponding silanols and alcohols. Notably, when presented with a substrate bearing both aliphatic and aromatic hydroxy groups the enzyme preferentially silylates the latter group, in clear contrast to nonenzymatic silylations. Furthermore, the silicateins are able to catalyze transetherifications, where the silyl group from one silyl ether may be transferred to a recipient alcohol. Despite close sequence homology to the protease cathepsin L, the silicateins seem to exhibit no significant protease or esterase activity when tested against analogous substrates. Overall, these results suggest the silicateins are promising candidates for future elaboration into efficient and selective biocatalysts for organosiloxane chemistry.
Co-reporter:Shuai Wang, Joseph Hosford, William P. Heath and Lu Shin Wong  
RSC Advances 2015 vol. 5(Issue 75) pp:61402-61409
Publication Date(Web):26 Jun 2015
DOI:10.1039/C5RA11967G
The precision and versatility afforded by scanning probe microscopy has enabled the development of a variety of methods for the facile fabrication of user-defined patterns on a variety of surfaces with nanoscale resolution. Historically, the major limitation of such scanning-probe nanolithography has been the inherently low throughput of single probe instrumentation, which has been addressed by the use of “two-dimensional” arrays of multiple probes for parallelised nanolithography. Key to the successful implementation of such arrays is a means to accurately align them relative to the substrate surface, such that all probes come into contact with the surface simultaneously upon the commencement of lithography. Here, an algorithm for the rapid, accurate and automated alignment of an array is described in the context of polymer pen lithography. This automation enables the alignment of the array of probes within minutes, without user intervention. Subsequent nanolithography of thiols on gold substrates demonstrated the generation of features over large (cm2) areas with high uniformity. Example features were 66.5 ± 9.8 and 71.3 ± 9.3 nm in size across a distance of 1.4 cm, indicating any misalignment as ≤0.0003°.
Co-reporter:Matthew P. Thompson; Jonathan Agger
Journal of Chemical Education 2015 Volume 92(Issue 10) pp:1716-1720
Publication Date(Web):August 10, 2015
DOI:10.1021/acs.jchemed.5b00129
The Paternò–Büchi photocycloaddition reaction is used as the basis for physical–organic final-year undergraduate laboratory experiments designed to emphasize the multidisciplinary approach to modern-day chemical practice. These reactions are performed using commercially available LED-based light sources, which offer a convenient and safe tool for teaching photochemistry. Using a series of substituted benzaldehydes and furan, experiments can be conducted to measure reaction rates and to isolate the products for structure determination. The experiments are deliberately broad in scope, covering mechanistic photochemistry, chemical kinetics, and photochemical organic synthesis in a holistic manner in order to demonstrate to students how topics usually taught separately are brought together. The reported experimental program also offers actinometry and quantum yield determinations, as well as NMR-based structural analysis, as potential routes for further elaboration of the experimental program.
Co-reporter:Stewart A. M. Carnally and Lu Shin Wong  
Nanoscale 2014 vol. 6(Issue 10) pp:4998-5007
Publication Date(Web):27 Mar 2014
DOI:10.1039/C4NR00618F
The use of scanning probes bearing catalysts to perform surface nanolithography combines the exquisite spatial precision of scanning probe microscopy with the synthetic capabilities of (bio)chemical catalysis. The ability to use these probes to direct a variety of localised chemical reactions enables the generation of nanoscale features with a high degree of chemical complexity in a “direct-write” manner. This article surveys the range of reactions that have been employed and the key factors necessary for the successful use of such catalytic scanning probes. These factors include the experimental parameters such as write speed, force applied to the probes and temperature; as well as the processes involved in the preparation of the catalysts on the probes and the surface that is to be fabricated. Where possible, the various reactions are also compared and contrasted; and future perspectives are discussed.
Co-reporter:Joseph Hosford;Dr. Sarah A. Shepherd;Dr. Jason Micklefield ;Dr. Lu Shin Wong
Chemistry - A European Journal 2014 Volume 20( Issue 50) pp:16759-16763
Publication Date(Web):
DOI:10.1002/chem.201403953

Abstract

Arylhalides are important building blocks in many fine chemicals, pharmaceuticals and agrochemicals, and there has been increasing interest in the development of more “green” halogenation methods based on enzyme catalysis. However, the screening and development of new enzymes for biohalogenation has been hampered by a lack of high-throughput screening methods. Described herein is the development of a colorimetric assay for detecting both chemical and enzymatic arylamine halogenation reactions in an aqueous environment. The assay is based on the unique UV/Vis spectrum created by the formation of an ortho-benzoquinone-amine adduct, which is produced by the peroxidase-catalysed benzoquinone generation, followed by Michael addition of either a halogenated or non-halogenated arylamine. This assay is sensitive, rapid and amenable to high-throughput screening platforms. We have also shown this assay to be easily coupled to a flavin-dependent halogenase, which currently lacks any convenient colorimetric assay, in a “one-pot” workflow.

Co-reporter:Dr. Anna-Winona Struck;Dr. Mark L. Thompson;Dr. Lu Shin Wong; Jason Micklefield
ChemBioChem 2012 Volume 13( Issue 18) pp:2642-2655
Publication Date(Web):
DOI:10.1002/cbic.201200556

Abstract

S-adenosyl methionine (SAM) is a universal biological cofactor that is found in all branches of life where it plays a critical role in the transfer of methyl groups to various biomolecules, including DNA, proteins and small-molecule secondary metabolites. The methylation process thus has important implications in various disease processes and applications in industrial chemical processing. This methyl transfer is catalysed by SAM-dependent methyltransferases (MTases), which are by far the largest groups of SAM-dependent enzymes. A significant amount is now known regarding the structural biology and enzymology of these enzymes, and, consequently, there is now significant scope for the development of new MTases and SAM analogues for applications from biomolecular imaging to biocatalytic industrial processes. This review will focus on current efforts in the manipulation of class I and V SAM-dependent MTases and the use of synthetic SAM analogues, which together offer the best prospects for rational redesign towards biotechnological applications. Firstly, metabolic engineering of organisms incorporating small-molecule MTases is discussed; this can be applied in a variety of areas from the industrial bioprocessing of flavourants and antibiotics to frontier research in biofuel production and bioremediation. Secondly, the application of MTases in combination with SAM analogues is reviewed; this allows the tagging of proteins and oligonucleotides with moieties other than the methyl group. Such tagging allows the isolation of the tagged biomolecule and aids its visualisation by a range of analytical methods. The review then summarises the potential advantages of MTase-mediated chemistry and offers some future perspectives on downstream applications.

Co-reporter:Lu Shin Wong, Farid Khan and Jason Micklefield
Chemical Reviews 2009 Volume 109(Issue 9) pp:4025
Publication Date(Web):July 2, 2009
DOI:10.1021/cr8004668
N3(CH2CH2O)3CH2CH2COOt-Bu
Benzenemethanol, 4-hydroxy-2-methoxy-
Ethanethioic acid,S-[11-(1,3-dihydro-1,3-dioxo-2H-isoindol-2-yl)undecyl] ester
2-(2-(2-((11-Mercaptoundecyl)oxy)ethoxy)ethoxy)ethanol
"1,2-Bis(2-aminoethoxy)ethane"