Alexander Greer

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Organization: The City University of New York
Department: Department of Chemistry and Graduate Center
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Co-reporter:Ashwini A. Ghogare, Ciro J. Debaz, Marilene Silva Oliveira, Inna Abramova, Prabhu P. Mohapatra, Kitae Kwon, Edyta M. Greer, Fernanda Manso Prado, Hellen Paula Valerio, Paolo Di Mascio, and Alexander Greer
The Journal of Physical Chemistry A August 17, 2017 Volume 121(Issue 32) pp:5954-5954
Publication Date(Web):July 14, 2017
DOI:10.1021/acs.jpca.7b02414
A nitrosamine photooxidation reaction is shown to generate a peroxy intermediate by experimental physical-organic methods. The irradiation of phenyl and methyl-substituted nitrosamines in the presence of isotopically labeled 18-oxygen revealed that an O atom was trapped from a peroxy intermediate to trimethylphosphite or triphenylphosphine, or by nitrosamine itself, forming two moles of nitramine. The unstable peroxy intermediate can be trapped at low temperature in postphotolyzed solution in the dark. Chemiluminescence was also observed upon thermal decomposition of the peroxy intermediate, that is, when a postphotolysis low-temperature solution is brought up to room temperature. A DFT study provides tentative information for cyclic nitrogen peroxide species on the reaction surface.
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Photochemistry and Photobiology 2017 Volume 93(Issue 2) pp:626-631
Publication Date(Web):2017/03/01
DOI:10.1111/php.12706
AbstractHyperforin is a constituent of St. John's wort and coexists with the singlet oxygen sensitizer hypericin. Density functional theory, molecular mechanics and Connolly surface calculations show that accessibility in the singlet oxygen “ene” reaction favors the hyperforin “southwest” and “southeast” prenyl (2-methyl-2-butenyl) groups over the northern prenyl groups. While the southern part of hyperforin is initially more susceptible to oxidation, up to 4 “ene” reactions of singlet oxygen can take place. Computational results assist in predicting the fate of adjacent hydroperoxides in hyperforin, where the loss of hydrogen atoms may lead to the formation of a hydrotrioxide and a carbonyl instead of a Russell reaction.
Co-reporter:Ashwini A. Ghogare and Alexander Greer
Chemical Reviews 2016 Volume 116(Issue 17) pp:9994-10034
Publication Date(Web):April 29, 2016
DOI:10.1021/acs.chemrev.5b00726
This Review describes singlet oxygen (1O2) in the organic synthesis of targets on possible 1O2 biosynthetic routes. The visible-light sensitized production of 1O2 is not only useful for synthesis; it is extremely common in nature. This Review is intended to draw a logical link between flow and batch reactions—a combination that leads to the current state of 1O2 in synthesis.
Co-reporter:Adaickapillai Mahendran, Ashwini A. Ghogare, Robert Bittman, Gilbert Arthur, Alexander Greer
Chemistry and Physics of Lipids 2016 Volume 194() pp:165-170
Publication Date(Web):January 2016
DOI:10.1016/j.chemphyslip.2015.07.023
•A new ceramide polysulfur conjugate was synthesized.•Antiproliferative activity was examined against breast, prostate, pancreas and cervix cancer cells and glioblastoma.•The bioactive properties were compared to a PEGylated polysulfane and a benzenedithiol which lacks the polysulfur ring.•The polysulfur ring is needed for biological activity.A benzopentasulfane was synthesized in 8 steps with a ceramide attached through an amide bond to the 7-position of the heterocycle structure. The anticancer activity of this synthetic ceramide–benzopolysulfane drug conjugate was analyzed against five human cancer cell lines MDA-MB-231 (breast), DU145 (prostate), MIA PaCa-2 (pancreas), HeLa (cervix), and U251 (glioblastoma). The ceramide–benzopolysulfane conjugate had IC50 values ranging from 10 to >20 μM with complete cell killing at 12.5 μM for MDA-MB-231 and 20 μM for DU145 and HeLa cells. The ceramide–benzopolysulfane conjugate had IC50 values 1.8 and 4.0 times lower than a PEG benzopolysulfane, N-(2-(2-(2-methoxyethoxy)ethoxy)ethyl)benzo[f][1,2,3,4,5]-pentathiepine-7-carboxamide, for MDA-MB-231 and DU145 cells, respectively. The parent “unsubstituted” benzopolysulfane, o-C6H4S5, had IC50 values 4.2 times lower and 2.7 times higher than the ceramide benzopolysulfane for MDA-MB-231 and DU145 cells, respectively. The results indicate that the polysulfur linkage is needed for activity since benzenedithiol, o-C6H4(SH)2, had IC50 values greater than 30 μM with little effect on MDA-MB-231 and DU145 cells. Thus, to account for the bioactivity, a bimolecular reaction of cellular thiol with the ceramide benzopolysulfane is a proposed followed by thiozone (S3) extrusion.
Co-reporter:Ashwini A. Ghogare;Joann M. Miller;Bikash Mondal;Alan M. Lyons;Keith A. Cengel;Theresa M. Busch;Alexer Greer
Photochemistry and Photobiology 2016 Volume 92( Issue 1) pp:166-172
Publication Date(Web):
DOI:10.1111/php.12538

Abstract

We describe progress on a one-step photodynamic therapy (PDT) technique that is simple: device tip delivery of sensitizer, oxygen and light simultaneously. Control is essential for their delivery to target sites to generate singlet oxygen. One potential problem is the silica device tip may suffer from biomaterial fouling and the pace of sensitizer photorelease is slowed. Here, we have used biomaterial (e.g. proteins, cells, etc.) from SQ20B head and neck tumors and whole blood for an assessment of fouling of the silica tips by adsorption. It was shown that by exchanging the native silica tip for a fluorinated tip, a better nonstick property led to an increased sensitizer output by ~10%. The fluorinated tip gave a sigmoidal photorelease where singlet oxygen is stabilized to physical quenching, whereas the native silica tip with unprotected SiO–H groups gave a slower (pseudolinear) photorelease. A further benefit from fluorinated silica is that 15% less biomaterial adheres to its surface compared to native silica based on a bicinchoninic acid assay (BCA) and X-ray photoelectron spectroscopy (XPS) measurements. We discuss how the fluorination of the device tip increases biofouling resistance and can contribute to a new pointsource PDT tool.

Co-reporter:Belaid Malek, William Fang, Inna Abramova, Niluksha Walalawela, Ashwini A. Ghogare, and Alexander Greer
The Journal of Organic Chemistry 2016 Volume 81(Issue 15) pp:6395-6401
Publication Date(Web):July 6, 2016
DOI:10.1021/acs.joc.6b01030
Prenylsurfactants [(CH3)2C═CH(CH2)nSO3– Na+ (n = 4, 6, or 8)] were designed to probe the “ene” reaction mechanism of singlet oxygen at the air–water interface. Increasing the number of carbon atoms in the hydrophobic chain caused an increase in the regioselectivity for a secondary rather than tertiary surfactant hydroperoxide, arguing for an orthogonal alkene on water. The use of water, deuterium oxide, and H2O/D2O mixtures helped to distinguish mechanistic alternatives to homogeneous solution conditions that include dewetting of the π bond and an unsymmetrical perepoxide transition state in the hydroperoxide-forming step. The prenylsurfactants and a photoreactor technique allowed a certain degree of interfacial control of the hydroperoxidation reaction on a liquid support, where the oxidant (airborne 1O2) is delivered as a gas.
Co-reporter:Belaid Malek, Ashwini A. Ghogare, Rajib Choudhury, Alexander Greer
Tetrahedron Letters 2015 Volume 56(Issue 30) pp:4505-4508
Publication Date(Web):22 July 2015
DOI:10.1016/j.tetlet.2015.05.111
The regioselective synthesis of allylic hydroperoxide sulfonates by singlet oxygenation at the air–water interface has been found to depend on the concentration of the alkene sulfonate and added calcium salt. The regioselectivity is proposed to originate from an orthogonal alkene relative to the water surface for preferential methyl hydrogen abstraction by airborne singlet oxygen in an ene reaction. The findings hint that the air–water interface is a locale for synthetic reactions.
Co-reporter:Marilene Silva Oliveira, Ashwini A. Ghogare, Inna Abramova, Edyta M. Greer, Fernanda Manso Prado, Paolo Di Mascio, and Alexander Greer
The Journal of Organic Chemistry 2015 Volume 80(Issue 12) pp:6119-6127
Publication Date(Web):May 22, 2015
DOI:10.1021/acs.joc.5b00633
The detection of an oxygen-atom photoexchange process of N-nitrosamines is reported. The photolysis of four nitrosamines (N-nitrosodiphenylamine 1, N-nitroso-N-methylaniline 2, N-butyl-N-(4-hydroxybutyl)nitrosamine 3, and N-nitrosodiethylamine 4) with ultraviolet light was examined in an 18O2-enriched atmosphere in solution. HPLC/MS and HPLC-MS/MS data show that 18O-labeled nitrosamines were generated for 1 and 2. In contrast, nitrosamines 3 and 4 do not exchange the 18O label and instead decomposed to amines and/or imines under the conditions. For 1 and 2, the 18O atom was found not to be introduced by moisture or by singlet oxygen [18(1O2 1Δg)] produced thermally by 18O–18O labeled endoperoxide of N,N′-di(2,3-hydroxypropyl)-1,4-naphthalene dipropanamide (DHPN18O2) or by visible-light sensitization. A density functional theory study of the structures and energetics of peroxy intermediates arising from reaction of nitrosamines with O2 is also presented. A reversible head-to-tail dimerization of the O-nitrooxide to the 1,2,3,5,6,7-hexaoxadiazocane (30 kcal/mol barrier) with extrusion of O═18O accounts for exchange of the oxygen atom label. The unimolecular cyclization of O-nitrooxide to 1,2,3,4-trioxazetidine (46 kcal/mol barrier) followed by a retro [2 + 2] reaction is an alternative, but higher energy process. Both pathways would require the photoexcitation of the nitrooxide.
Co-reporter:Goutam Ghosh, Mihaela Minnis, Ashwini A. Ghogare, Inna Abramova, Keith A. Cengel, Theresa M. Busch, and Alexander Greer
The Journal of Physical Chemistry B 2015 Volume 119(Issue 10) pp:4155-4164
Publication Date(Web):February 16, 2015
DOI:10.1021/acs.jpcb.5b00808
We describe a physical–organic study of two fluoropolymers bearing a photoreleasable PEGylated photosensitizer that generates 1O2(1Δg) [chlorin e6 methoxy tri(ethylene glycol) triester]. The surfaces are Teflon/poly(vinyl alcohol) (PVA) nanocomposite and fluorinated silica. The relative efficiency of these surfaces to photorelease the PEGylated sensitizer [shown previously to be phototoxic to ovarian cancer cells (Kimani, S. et al. J. Org. Chem 2012, 77, 10638)] was slightly higher for the nanocomposite. In the presence of red light and O2, 1O2 is formed, which cleaves an ethene linkage to liberate the sensitizer in 68–92% yield. The fluoropolymers were designed to deal with multiple problems. Namely, their success relied not only on high O2 solubility and drug repellency but also on the C–F bonds, which physically quench little 1O2, for singlet oxygen’s productive use away from the surface. The results obtained here indicate that Teflon-like surfaces have potential uses in delivering sensitizer and singlet oxygen for applications in tissue repair and photodynamic therapy (PDT).
Co-reporter:Benjamin Rudshteyn;Álvaro Castillo;Ashwini A. Ghogare;Joel F. Liebman;Alexer Greer
Photochemistry and Photobiology 2014 Volume 90( Issue 2) pp:431-438
Publication Date(Web):
DOI:10.1111/php.12199

Abstract

Photobiologic and synthetic versatility of hydrazones has not yet been established with 1O2 as a route to commonly encountered nitrosamines. Thus, to determine whether the “parent” reaction of formalhydrazone and 1O2 leads to facile C=N bond cleavage and resulting nitrosamine formation, we have carried out CCSD(T)//DFT calculations and analyzed the energetics of the oxidation pathways. A [2 + 2] pathway occurs via diradicals and formation of 3-amino-1,2,3-dioxazetidine in a 16 kcal/mol−1 process. Reversible addition or physical quenching of 1O2 occurs either on the formalhydrazone carbon for triplet diradicals at 2–3 kcal mol−1, or on the nitrogen (N(3)) atom forming zwitterions at ~15 kcal/mol−1, although the quenching channel by charge-transfer interaction was not computed. The computations also predict a facile conversion of formalhydrazone and 1O2 to hydroperoxymethyl diazene in a low-barrier ‘ene’ process, but no 2-amino-oxaziridine-O-oxide (perepoxide-like) intermediate was found. A Benson-like analysis (group increment calculations) on the closed-shell species are in accord with the quantum chemical results.

Co-reporter:Ashwini A. Ghogare;Imran Rizvi;Tayyaba Hasan;Alexer Greer
Photochemistry and Photobiology 2014 Volume 90( Issue 5) pp:1119-1125
Publication Date(Web):
DOI:10.1111/php.12274

Abstract

We describe a pointsource sensitizer-tipped microoptic device for the eradication of glioma U87 cells. The device has a mesoporous fluorinated silica tip which emits singlet oxygen molecules and small quantities of pheophorbide sensitizer for additional production of singlet oxygen in the immediate vicinity. The results show that the device surges in sensitizer release and photokilling with higher rates about midway through the reaction. This was attributed to a self-amplified autocatalytic reaction where released sensitizer in the extracellular matrix provides positive feedback to assist in the release of additional sensitizer. The photokilling of the glioma cells was analyzed by global toxicity and live/dead assays, where a killing radius around the tip with ~0.3 mm precision was achieved. The implication of these results for a new PDT tool of hard-to-resect tumors, e.g. in the brain, is discussed.

Co-reporter:Niluksha Walalawela ;Alexer Greer
Photochemistry and Photobiology 2014 Volume 90( Issue 6) pp:1216-1218
Publication Date(Web):
DOI:10.1111/php.12355

Abstract

This article is a highlight of the paper by Ferrari et al. in this issue of Photochemistry and Photobiology. It describes the innovative use of rose bengal-conjugated chitosan as a reusable green catalyst that photo-degrades phenolic compounds in aqueous media, and thereby has decontamination potential of polluted waters. Whether a next-generation photoactive polymer that produces singlet oxygen is a solution to pollutant degradation can be argued. It is as yet unclear what polymeric sensitizer would be practical on a large scale. Nonetheless pursuing this goal is worthwhile.

Co-reporter:Rajib Choudhury and Alexander Greer
Langmuir 2014 Volume 30(Issue 12) pp:3599-3605
Publication Date(Web):2017-2-22
DOI:10.1021/la404564k
The reactivity of a trisubstituted alkene surfactant (8-methylnon-7-ene-1 sulfonate, 1) to airborne singlet oxygen in a solution containing E. coli was examined. Surfactant 1 was prepared by a Strecker-type reaction of 9-bromo-2-methylnon-2-ene with sodium sulfite. Submicellar concentrations of 1 were used that reacted with singlet oxygen by an “ene” reaction to yield two hydroperoxides (7-hydroperoxy-8-methylnon-8-ene-1 sulfonate and (E)-8-hydroperoxy-8-methylnon-6-ene-1 sulfonate) in a 4:1 ratio. Exchanging the H2O solution for D2O where the lifetime of solution-phase singlet oxygen increases by 20-fold led to an ∼2-fold increase in the yield of hydroperoxides pointing to surface activity of singlet oxygen with the surfactant in a partially solvated state. In this airborne singlet oxygen reaction, E. coli inactivation was monitored in the presence and absence of 1 and by a LIVE/DEAD cell permeabilization assay. It was shown that the surfactant has low dark toxicity with respect to the bacteria, but in the presence of airborne singlet oxygen, it produces a synergistic enhancement of the bacterial inactivation. How the ene-derived surfactant hydroperoxides can provoke 1O2 toxicity and be of general utility is discussed.
Co-reporter:David Aebisher ; Dorota Bartusik ; Yang Liu ; Yuanyuan Zhao ; Mark Barahman ; QianFeng Xu ; Alan M. Lyons
Journal of the American Chemical Society 2013 Volume 135(Issue 50) pp:18990-18998
Publication Date(Web):December 2, 2013
DOI:10.1021/ja410529q
We describe here a physical-organic study of the first triphasic superhydrophobic sensitizer for photooxidations in water droplets. Control of synthetic parameters enables the mechanistic study of “borderline” two- and three-phase superhydrophobic sensitizer surfaces where 1O2 is generated in compartments that are wetted, partially wetted, or remain dry in the plastron (i.e., air layer beneath the droplet). The superhydrophobic surface is synthesized by partially embedding silicon phthalocyanine (Pc) sensitizing particles to specific locations on polydimethylsiloxane (PDMS) posts printed in a square array (1 mm tall posts on 0.5 mm pitch). In the presence of red light and oxygen, singlet oxygen is formed on the superhydrophobic surface and reacts with 9,10-anthracene dipropionate dianion (1) within a freestanding water droplet to produce an endoperoxide in 54–72% yields. Control of the 1O2 chemistry was achieved by the synthesis of superhydrophobic surfaces enriched with Pc particles either at the PDMS end-tips or at PDMS post bases. Much of the 1O2 that reacts with anthracene 1 in the droplets was generated by the sensitizer “wetted” at the Pc particle/water droplet interface and gave the highest endoperoxide yields. About 20% of the 1O2 can be introduced into the droplet from the plastron. The results indicate that the superhydrophobic sensitizer surface offers a unique system to study 1O2 transfer routes where a balance of gas and liquid contributions of 1O2 is tunable within the same superhydrophobic surface.
Co-reporter:Dorota Bartusik;David Aebisher;Ashwini Ghogare;Goutam Ghosh;Inna Abramova;Tayyaba Hasan;Alexer Greer
Photochemistry and Photobiology 2013 Volume 89( Issue 4) pp:936-941
Publication Date(Web):
DOI:10.1111/php.12072

Abstract

A portable “fiber optic-based sensitizer delivery” (FOSD) device has been developed and studied. Before there might be success in photodynamic therapy (PDT) and antibacterial ambitions, an understanding of basic factors on device performance was needed. Thus, the device was examined for the localized delivery of sensitizer molecules in ovarian cancer cells and production of high concentrations of singlet oxygen for their eradication in vitro. The device tip releases stored pheophorbide by attack of singlet oxygen from sensitized oxygen gas delivered through the hollow fiber using 669 nm laser light. The performance of the device was enhanced when configured with a fluorosilane tip by virtue of its Teflon-like property compared with a conventional glass tip (greater sensitizer quantities were photoreleased and laterally diffused, and greater amounts of ovarian OVCAR-5 cancer cells were killed). No cell damage was observed at 2.2 N of force applied by the probe tip itself, an amount used for many of the experiments described here.

Co-reporter:Inna Abramova ;Alexer Greer
Chemistry & Biodiversity 2013 Volume 10( Issue 9) pp:1724-1728
Publication Date(Web):
DOI:10.1002/cbdv.201300211
Co-reporter:Dorota Bartusik, Mihaela Minnis, Goutam Ghosh, and Alexander Greer
The Journal of Organic Chemistry 2013 Volume 78(Issue 17) pp:8537-8544
Publication Date(Web):July 30, 2013
DOI:10.1021/jo401266r
The photorelease of a sensitizer from a fluorinated silica surface occurs by a reaction of singlet oxygen with the vinyl ether bond linker with scission of a dioxetane intermediate. Irradiation of the released sensitizer generates singlet oxygen, which accelerates the release of more sensitizer via an autocatalytic reaction. Sigmoidal behavior of sensitizer release in n-butanol and n-octanol occurs at an optimal temperature of 20 °C. The photorelease efficiency was reduced at low temperatures, where the sensitizer was retained on the surface due to a long-lived dioxetane with inefficient scission, and also reduced at high temperatures, due to a slower reaction of 1O2 with the vinyl ether bond. Immediate acceleration is a result of released sensitizer being used as a dopant to eliminate the induction step, further implicating an autocatalytic mechanism. However, the sigmoidal sensitizer release was not correlated to solvent viscosity, heat, or light from the dioxetane decomposition or to minor O2 solubility enhancements caused by the fluorinated silica. The mechanistic information collected here can be used to help control the pace of drug release; however, it remains to be seen whether an autocatalytic-based drug delivery system has an advantage to those with non-sigmoidal kinetics.
Co-reporter:Dorota Bartusik, David Aebisher, Alan M. Lyons, and Alexander Greer
Environmental Science & Technology 2012 Volume 46(Issue 21) pp:12098
Publication Date(Web):October 18, 2012
DOI:10.1021/es303645n
A microphotoreactor device was developed to generate bubbles (1.4 mm diameter, 90 μL) containing singlet oxygen at levels toxic to bacteria and fungus. As singlet oxygen decays rapidly to triplet oxygen, the bubbles leave behind no waste or byproducts other than O2. From a comparative study in deaerated, air saturated, and oxygenated solutions, it was reasoned that the singlet oxygen bubbles inactivate Escherichia coli and Aspergillus fumigatus, mainly by an oxygen gradient inside and outside of the bubble such that singlet oxygen is solvated and diffuses through the aqueous solution until it reacts with the target organism. Thus, singlet oxygen bubble toxicity was inversely proportional to the amount of dissolved oxygen in solution. In a second mechanism, singlet oxygen interacts directly with E. coli that accumulate at the gas–liquid interface although this mechanism operates at a rate approximately 10 times slower. Due to encapsulation in the gaseous core of the bubble and a 0.98 ms lifetime, the bubbles can traverse relatively long 0.39 mm distances carrying 1O2 far into the solution; by comparison the diffusion distance of 1O2 fully solvated in H2O is much shorter (∼150 nm). Bubbles that reached the outer air–water interface contained no 1O2. The mechanism by which 1O2 deactivated organisms was explored through the addition of detergent molecules and Ca2+ ions. Results indicate that the preferential accumulation of E. coli at the air–water interface of the bubble leads to enhanced toxicity of bubbles containing 1O2. The singlet oxygen device offers intriguing possibilities for creating new types of disinfection strategies based on photodynamic (1O2) bubble carriers.
Co-reporter:Álvaro Castillo;Leda Lee ;Alexer Greer
Journal of Physical Organic Chemistry 2012 Volume 25( Issue 1) pp:42-49
Publication Date(Web):
DOI:10.1002/poc.1866

Nanotubes are a class of host cavities increasingly used to encapsulate unstable molecules, yet none have been exploited to host reactive sulfur species, such as thiozone (S3). In this paper, density functional theory and (ONIOM) calculations were used to compute single-walled carbon nanotube (SWNT)–thiozone combinations for the inclusion of S3 into the hollow nanotube space and to rationalize when 1,2,3-thiozonide formation can take place. Nanotube diameter selectivity for the isomerization of the C2v form of S3 to the D3h form proved to be elusive. Acyclic C2v S3 was ~6 kcal/mol more stable than cyclic D3h S3 whether it was free or encapsulated within an SWNT. 1,2,3-Thiozonide formation took place on the convex side of nanotubes of low tube radii, such as the armchair (4,4) and (5,5) SWNTs. In terms of the reaction mode of C2v S3, the 1,3-dipolar addition reaction was preferred compared with the [2 + 2] cycloaddition and chelotrope paths. Copyright © 2011 John Wiley & Sons, Ltd.

Co-reporter:Dorota Bartusik, David Aebisher, BiBi Ghafari, Alan M. Lyons, and Alexander Greer
Langmuir 2012 Volume 28(Issue 5) pp:3053-3060
Publication Date(Web):January 20, 2012
DOI:10.1021/la204583v
Laser-coupled microphotoreactors were developed to bubble singlet oxygen [1O2 (1Δg)] into an aqueous solution containing an oxidizable compound. The reactors consisted of custom-modified SMA fiberoptic receptacles loaded with 150 μm silicon phthalocyanine glass sensitizer particles, where the particles were isolated from direct contact with water by a membrane adhesively bonded to the bottom of each device. A tube fed O2 gas to the reactor chambers. In the presence of O2, singlet oxygen was generated by illuminating the sensitizer particles with 669 nm light from an optical fiber coupled to the top of the reactor. The generated 1O2 was transported through the membrane by the O2 stream and formed bubbles in solution. In solution, singlet oxygen reacted with probe compounds (9,10-anthracene dipropionate dianion, trans-2-methyl-2-pentanoate anion, N-benzoyl-d,l-methionine, or N-acetyl-d,l-methionine) to give oxidized products in two stages. The early stage was rapid and showed that 1O2 transfer occurred via bubbles mainly in the bulk water solution. The later stage was slow; it arose only from 1O2-probe molecule contact at the gas/liquid interface. A mechanism is proposed that involves 1O2 mass transfer and solvation, where smaller bubbles provide better penetration of 1O2 into the flowing stream due to higher surface-to-volume contact between the probe molecules and 1O2.
Co-reporter:Dorota Bartusik, David Aebisher, Goutam Ghosh, Mihaela Minnis, and Alexander Greer
The Journal of Organic Chemistry 2012 Volume 77(Issue 10) pp:4557-4565
Publication Date(Web):April 30, 2012
DOI:10.1021/jo3006107
The usefulness of a fiber optic technique for generating singlet oxygen and releasing the pheophorbide photosensitizer has been increased by the fluorination of the porous Vycor glass tip. Singlet oxygen emerges through the fiber tip with 669-nm light and oxygen, releasing the sensitizer molecules upon a [2 + 2] addition of singlet oxygen with the ethene spacer and scission of a dioxetane intermediate. Switching from a nonfluorinated to a fluorinated glass tip led to a clear reduction of the adsorbtive affinity of the departing sensitizer with improved release into homogeneous toluene solution and bovine tissue, but no difference was found in water since the sensitizer was insoluble. High surface coverage of the nonafluorohexylsilane enhanced the cleavage efficiency by 15% at the ethene site. The fluorosilane groups also caused crowding and seemed to reduce access of 1O2 to the ethene site, which attenuated the total quenching rate constant kT, although there was less wasted 1O2 (from surface physical quenching) at the fluorosilane-coated than the native SiOH silica. The observations support a quenching mechanism that the replacement of the SiOH groups for the fluorosilane C–H and C–F groups enhanced the 1O2 lifetime at the fiber tip interface due to less efficient electronic-to-vibronic energy transfer.
Co-reporter:Stanley Kimani, Goutam Ghosh, Ashwini Ghogare, Benjamin Rudshteyn, Dorota Bartusik, Tayyaba Hasan, and Alexander Greer
The Journal of Organic Chemistry 2012 Volume 77(Issue 23) pp:10638-10647
Publication Date(Web):November 5, 2012
DOI:10.1021/jo301889s
PEGylated chlorin e6 photosensitizers were synthesized with tri(ethylene glycol) attached at the ester bond(s) for a 1:1 conjugate at the 173-position, a 2:1 conjugate at the 152- and 173-positions, and a 3:1 conjugate at the 131-, 152-, and 173-positions. These chlorin sensitizers were studied for hydrolytic stability and solubility, as well as ovarian OVCAR-5 cancer cell uptake, localization, and phototoxicity. Increasing numbers of the PEG groups in the mono-, di-, and tri-PEG chlorin conjugates increased the water solubility and sensitivity to hydrolysis and uptake into the ovarian cancer cells. The PEG chlorin conjugates accumulated in the cytoplasm and mitrochondria, but not in lysosomes. Higher phototoxicity was roughly correlated with higher numbers of PEG groups, with the tri-PEG chlorin conjugate showing the best overall ovarian cancer cell photokilling of the series. Singlet oxygen lifetimes, solvent deuteration, and the effects of additives azide ion and d-mannitol were examined to help clarify the photokilling mechanisms. A Type-II (singlet oxygen) photosensitized mechanism is suggested for the di- and tri-PEG chlorin conjugates; however, a more complicated process based in part on a Type-I (radicals or radical ions) mechanism is suggested for the parent chlorin e6 and the mono-PEG chlorin conjugate.
Co-reporter:Matibur Zamadar ; Goutam Ghosh ; Adaickapillai Mahendran ; Mihaela Minnis ; Bonnie I. Kruft ; Ashwini Ghogare ; David Aebisher
Journal of the American Chemical Society 2011 Volume 133(Issue 20) pp:7882-7891
Publication Date(Web):May 3, 2011
DOI:10.1021/ja200840p
An optical fiber has been developed with a maneuverable mini-probe tip that sparges O2 gas and photodetaches pheophorbide (sensitizer) molecules. Singlet oxygen is produced at the probe tip surface which reacts with an alkene spacer group releasing sensitizer upon fragmentation of a dioxetane intermediate. Optimal sensitizer photorelease occurred when the probe tip was loaded with 60 nmol sensitizer, where crowding of the pheophorbide molecules and self-quenching were kept to a minimum. The fiber optic tip delivered pheophorbide molecules and singlet oxygen to discrete locations. The 60 nmol sensitizer was delivered into petrolatum; however, sensitizer release was less efficient in toluene-d8 (3.6 nmol) where most had remained adsorbed on the probe tip, even after the covalent alkene spacer bond had been broken. The results open the door to a new area of fiber optic-guided sensitizer delivery for the potential photodynamic therapy of hypoxic structures requiring cytotoxic control.
Co-reporter:Adaickapillai Mahendran;Yasemin Kopkalli;Goutam Ghosh;Ashwini Ghogare;Mihaela Minnis;Bonnie I. Kruft;Matibur Zamadar;David Aebisher;Lesley Davenport ;Alexer Greer
Photochemistry and Photobiology 2011 Volume 87( Issue 6) pp:1330-1337
Publication Date(Web):
DOI:10.1111/j.1751-1097.2011.00971.x

Abstract

We have constructed a fiber optic device that internally flows triplet oxygen and externally produces singlet oxygen, causing a reaction at the (Z)-1,2-dialkoxyethene spacer group, freeing a pheophorbide sensitizer upon the fragmentation of a reactive dioxetane intermediate. The device can be operated and sensitizer photorelease observed using absorption and fluorescence spectroscopy. We demonstrate the preference of sensitizer photorelease when the probe tip is in contact with octanol or lipophilic media. A first-order photocleavage rate constant of 1.13 h−1 was measured in octanol where dye desorption was not accompanied by readsorption. When the probe tip contacts aqueous solution, the photorelease was inefficient because most of the dye adsorbed on the probe tip, even after the covalent ethene spacer bonds have been broken. The observed stability of the free sensitizer in lipophilic media is reasonable even though it is a pyropheophorbide-a derivative that carries a p-formylbenzylic alcohol substituent at the carboxylic acid group. In octanol or lipid systems, we found that the dye was not susceptible to hydrolysis to pyropheophorbide-a, otherwise a pH effect was observed in a binary methanol-water system (9:1) at pH below 2 or above 8.

Co-reporter:Bonnie I. Kruft ;Alexer Greer
Photochemistry and Photobiology 2011 Volume 87( Issue 6) pp:1204-1213
Publication Date(Web):
DOI:10.1111/j.1751-1097.2011.00993.x

Abstract

This review of Photochemistry and Photobiology summarizes articles published in 2010, and highlights progress in the area of photosensitization. The synthesis of conjugated photosensitizers is an area of interest where increasing water solubility has been a goal. Targeting infrared sensitizer absorption has been another goal, and relates to the practical need of deep tissue absorption of light. Photodynamic techniques for inactivating microbes and destroying tumors have been particularly successful. Biologically, singlet oxygen [1O2(1Δg)] is an integral species in many of these reactions, although photosensitized oxidations tuned to electron and hydrogen transfer (Type I) give rise to other reactive species, such as superoxide and hydrogen peroxide. How photoprotection against yellowing, oxygenation and degradation occurs was also an area of topical interest.

Co-reporter:Alexer Greer
Chemistry & Biodiversity 2011 Volume 8( Issue 11) pp:2158-2161
Publication Date(Web):
DOI:10.1002/cbdv.201100291
Co-reporter:David Aebisher;Matibur Zamadar;Adaickapillai Mahendran;Goutam Ghosh;Catherine McEntee;Alexer Greer
Photochemistry and Photobiology 2010 Volume 86( Issue 4) pp:890-894
Publication Date(Web):
DOI:10.1111/j.1751-1097.2010.00748.x

Abstract

Traditionally, Type II heterogeneous photo-oxidations produce singlet oxygen via external irradiation of a sensitizer and external supply of ground-state oxygen. A potential improvement is reported here. A hollow-core fiber-optic device was developed with an “internal” supply of light and flowing oxygen, and a porous photosensitizer-end capped configuration. Singlet oxygen was delivered through the fiber tip. The singlet oxygen steady-state concentration in the immediate vicinity of the probe tip was ca 20 fm by N-benzoyl-dl-methionine trapping. The device is portable and the singlet oxygen-generating tip is maneuverable, which opened the door to simple disinfectant studies. Complete Escherichia coli inactivation was observed in 2 h when the singlet oxygen sensitizing probe tip was immersed in 0.1 mL aqueous samples of 0.1–4.4 × 107 cells. Photobleaching of the probe tip occurred after ca 12 h of use, requiring baking and sensitizer reloading steps for reuse.

Co-reporter:Mary L. Raber Dr.;Alvaro Castillo;Alexer Greer Dr.;Craig A. Townsend Dr.
ChemBioChem 2009 Volume 10( Issue 18) pp:2904-2912
Publication Date(Web):
DOI:10.1002/cbic.200900389

Abstract

β-Lactam synthetase (β-LS) is the paradigm of a growing class of enzymes that form the critical β-lactam ring in the clavam and carbapenem antibiotics. β-LS catalyzes a two-stage reaction in which N2-(2-carboxyethyl)-L-arginine is first adenylated, and then undergoes intramolecular ring closure. It was previously shown that the forward kinetic commitment to β-lactam formation is high, and that the overall rate of reaction is partially limited to a protein conformational change rather than to the chemical step alone of closing the strained ring. β-Lactam formation was evaluated on the basis of X-ray crystal structures, site-specific mutation, and kinetic and computational studies. The combined evidence clearly points to a reaction coordinate involving the formation of a tetrahedral transition state/intermediate stabilized by a conserved Lys. The combination of substrate preorganization, a well-stabilized transition state and an excellent leaving group facilitates this acyl substitution to account for the strong forward commitment to catalysis and to lower the barrier of four-membered ring formation to the magnitude of a protein conformational change.

Co-reporter:Alvaro Castillo
Structural Chemistry 2009 Volume 20( Issue 3) pp:399-407
Publication Date(Web):2009 June
DOI:10.1007/s11224-009-9424-1
Theoretical calculations have been used to examine singlet oxygen release from a naphthalene endoperoxide which bears a flexible (CH2)22 polymethylene “lid”. Monte Carlo and ONIOM calculations that incorporated semi-empirical and density functional theory predicted the conformational influence of the polymethylene chain in the cycloreversion of dioxapaddlane, 1,4-diicosa naphthalene-1,4-endoperoxide, to 1O2 and 1,4-diicosa naphthalene. This study attempts to build a connection between 1O2 generation and “jump rope” dynamics of the dioxapaddlane. The polymethylene chain appears to function as a gatekeeper for the oxygen. Instead of coming full circle, a semi-circle rotation of the polymethylene bridge protected the peroxide group, limiting the dissociation of 1O2 from the naphthalene site.
Co-reporter:Matibur Zamadar, David Aebisher and Alexander Greer
The Journal of Physical Chemistry B 2009 Volume 113(Issue 48) pp:15803-15806
Publication Date(Web):October 29, 2009
DOI:10.1021/jp907945c
The development of the first photosensitizer/fiber optic device is reported. An oxygen-flowing, fiber-capped configuration is used for the application of heterogeneous, spatially confined singlet oxygen delivery in aqueous media. This is a unique device, unlike other heterogeneous photosensitizers, in which local concentrations of singlet oxygen can be delivered via introduction and withdrawal of the fiber tip.
Co-reporter:Jovan Giaimuccio, Matibur Zamadar, David Aebisher, Gerald J. Meyer and Alexander Greer
The Journal of Physical Chemistry B 2008 Volume 112(Issue 49) pp:15646-15650
Publication Date(Web):November 12, 2008
DOI:10.1021/jp807556x
Insight into the O2 quenching mechanism of a photosensitizer (static or dynamic) would be useful for the design of heterogeneous systems to control the mode of generation of 1O2 in water. Here, we describe the use of a photosensitizer, meso-tetra(N-methyl-4-pyridyl)porphine (1), which was adsorbed onto porous Vycor glass (PVG). A maximum loading of 1.1 × 10−6 mol 1 per g PVG was achieved. Less than 1% of the PVG surface was covered with photosensitizer 1, and the penetration of 1 reaches a depth of 0.32 mm along all faces of the glass. Time-resolved measurements showed that the lifetime of triplet 1*-ads was 57 μs in water. Triplet O2 quenched the transient absorption of triplet 1*-ads; for samples containing 0.9 × 10−6−0.9 × 10−8 mol 1 adsorbed per g PVG, the Stern−Volmer constant, KD, ranged from 23 700 to 32 100 M−1. The adduct formation constant, KS, ranged from 1310 to 510 M−1. The amplitude of the absorption at 470 nm decreased slightly (by about 0.1) with increased O2 concentrations. Thus, the quenching behavior of triplet 1*-ads by O2 was proposed to be strongly dependent on dynamic quenching. Only ∼10% of the quenching was attributed to the static quenching mechanism. The quenching of triplet 1*-ads was similar to that observed for photosensitizers in homogeneous solution which are often quenched dynamically by O2.
Co-reporter:David Aebisher, Edyta M. Brzostowska, Nahed Sawwan, Rafael Ovalle and Alexander Greer
Journal of Natural Products 2007 Volume 70(Issue 9) pp:1492-1494
Publication Date(Web):August 22, 2007
DOI:10.1021/np070108t
Natural o-benzopolysulfanes are often thought to exist as either the trisulfane or pentasulfane; the nomenclature has evolved around such notions. No study makes reference to the possible existence of natural o-benzoheptasulfanes. The work performed here indicates that a facile equilibration takes place between the tri-, penta-, and heptasulfanes (o-C6H4S3, o-C6H4S5, and o-C6H4S7) in solution. In these simpler (unnatural) compounds, the number of sulfur atoms can be established unequivocally from their independent syntheses. The o-benzopolysulfanes, even after purification, yield mixtures of compounds in solution. A similar equilibration may be anticipated for the corresponding natural products.
Co-reporter:Aaron T. Frank;Nicola S. Farina;Nahed Sawwan;Orrette R. Wauchope
Molecular Diversity 2007 Volume 11( Issue 3-4) pp:115-118
Publication Date(Web):2007 August
DOI:10.1007/s11030-007-9065-5
This paper examines ring size patterns of natural product macrocycles. Evidence is presented that natural macrocycles containing 14-, 16-, and 18-membered rings are of frequent occurrence based on a data mining study. The results raise a question about the limited diversity of macrocycle ring sizes and the nature of the constraints that may cause them. The data suggest that the preference bears no relationship to the odd–even frequency in natural fatty acids. The trends reported here, along with those reported previously (Wessjohann et al. (2005) Mol Divers 9:171), may be generalized to better understand the possible structure preferences of natural macrocycles.
2-(6,7-dimethoxy-1,2,3,4,5-benzopentathiepin-9-yl)ethanamine
lissoclinotoxin A
Nonanal, 9-bromo-
2-Heptene, 7-iodo-2-methyl-
chloroaluminum tetrasulfophthalocyanine
2-HEPTENE, 7-BROMO-2-METHYL-
NITROSAMINE
Formaldehyde, hydrazone(7CI,8CI,9CI)
Pentanal, 5-bromo-