Martin D. Smith

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Organization: University of Oxford , England
Department: Chemistry Research Laboratory
Title: (PhD)

TOPICS

Co-reporter:Dr. Philip A. Gerken;Dr. Jamie R. Wolstenhulme;Dr. Anthony Tumber;Dr. Stephanie B. Hatch;Yijia Zhang;Dr. Susanne Müller;Shane A. Chler;Dr. Barbara Mair;Fengling Li; Dr. Sebastian M. B. Nijman;Dr. Rebecca Konietzny;Tamas Szommer;Clarence Yapp;Dr. Oleg Fedorov; Dr. Justin L. P. Benesch; Dr. Masoud Vedadi; Dr. Benedikt M. Kessler;Dr. Akane Kawamura; Dr. Paul E. Brennan; Dr. Martin D. Smith
Angewandte Chemie International Edition 2017 Volume 56(Issue 49) pp:15555-15559
Publication Date(Web):2017/12/04
DOI:10.1002/anie.201706788
AbstractHistone lysine demethylases (KDMs) are of critical importance in the epigenetic regulation of gene expression, yet there are few selective, cell-permeable inhibitors or suitable tool compounds for these enzymes. We describe the discovery of a new class of inhibitor that is highly potent towards the histone lysine demethylases KDM2A/7A. A modular synthetic approach was used to explore the chemical space and accelerate the investigation of key structure–activity relationships, leading to the development of a small molecule with around 75-fold selectivity towards KDM2A/7A versus other KDMs, as well as cellular activity at low micromolar concentrations.
Co-reporter:Dr. Philip A. Gerken;Dr. Jamie R. Wolstenhulme;Dr. Anthony Tumber;Dr. Stephanie B. Hatch;Yijia Zhang;Dr. Susanne Müller;Shane A. Chler;Dr. Barbara Mair;Fengling Li; Dr. Sebastian M. B. Nijman;Dr. Rebecca Konietzny;Tamas Szommer;Clarence Yapp;Dr. Oleg Fedorov; Dr. Justin L. P. Benesch; Dr. Masoud Vedadi; Dr. Benedikt M. Kessler;Dr. Akane Kawamura; Dr. Paul E. Brennan; Dr. Martin D. Smith
Angewandte Chemie 2017 Volume 129(Issue 49) pp:15761-15765
Publication Date(Web):2017/12/04
DOI:10.1002/ange.201706788
AbstractHistone lysine demethylases (KDMs) are of critical importance in the epigenetic regulation of gene expression, yet there are few selective, cell-permeable inhibitors or suitable tool compounds for these enzymes. We describe the discovery of a new class of inhibitor that is highly potent towards the histone lysine demethylases KDM2A/7A. A modular synthetic approach was used to explore the chemical space and accelerate the investigation of key structure–activity relationships, leading to the development of a small molecule with around 75-fold selectivity towards KDM2A/7A versus other KDMs, as well as cellular activity at low micromolar concentrations.
Co-reporter:Alan D. Lamb, Peter D. Davey, Russell W. Driver, Amber L. Thompson, and Martin D. Smith
Organic Letters 2016 Volume 18(Issue 20) pp:5372-5375
Publication Date(Web):October 6, 2016
DOI:10.1021/acs.orglett.6b02744
Functionalized 4- and 6-azaindolines are accessible with high levels of enantioselectivity by the cation-directed cyclization of aminopyridine-derived imines via phase-transfer catalysis. The extension of this methodology to diastereoselective cyclizations is also described.
Co-reporter:Krishna Sharma; Jamie R. Wolstenhulme; Phillip P. Painter; David Yeo; Francisca Grande-Carmona; Craig P. Johnston; Dean J. Tantillo
Journal of the American Chemical Society 2015 Volume 137(Issue 41) pp:13414-13424
Publication Date(Web):September 23, 2015
DOI:10.1021/jacs.5b08834
A catalytic enantioselective approach to the synthesis of indolines bearing two asymmetric centers, one of which is all-carbon and quaternary, is described. This reaction proceeds with high levels of diastereoselectivity (>20:1) and high levels of enantioselectivity (up to 99.5:0.5 er) in the presence of CsOH·H2O and a quinine-derived ammonium salt. The reaction most likely proceeds via a delocalized 2-aza-pentadienyl anion that cyclizes either by a suprafacial electrocyclic mechanism, or through a kinetically controlled 5-endo-trig Mannich process. Density functional theory calculations are used to probe these two mechanistic pathways and lead to the conclusion that a nonpericyclic mechanism is most probable. The base-catalyzed interconversion of diastereoisomeric indolines in the presence of certain quaternary ammonium catalysts is observed; this may be rationalized as a cycloreversion–cyclization process. Mechanistic investigations have demonstrated that the reaction is initiated via a Mąkosza-like interfacial process, and kinetic analysis has shown that the reaction possesses a significant induction period consistent with autoinduction. A zwitterionic quinine-derived entity generated by deprotonation of an ammonium salt with the anionic reaction product is identified as a key catalytic species and the role that protonation plays in the enantioselective process outlined. We also propose that the reaction subsequently occurs entirely within the organic phase. Consequently, the reaction may be better described as a phase-transfer-initiated rather than a phase-transfer-catalyzed process; this observation may have implications for mechanistic pathways followed by other phase-transfer-mediated reactions.
Co-reporter:Jamie R. Wolstenhulme, Alex Cavell, Matija Gredičak, Russell W. Driver and Martin D. Smith  
Chemical Communications 2014 vol. 50(Issue 88) pp:13585-13588
Publication Date(Web):15 Sep 2014
DOI:10.1039/C4CC06683A
A cascade approach to complex pyrroloindolines bearing all-carbon quaternary stereocentres has been developed. This two-component process uses a chiral ammonium salt to control diastereo- and enantioselectivity in the addition of isocyanides to functionalized alkenes to afford pyrroloindolines with up to three stereocentres. A mechanistic proposal involving intramolecular hydrogen bond activation of the isocyanide is described.
Co-reporter:Peter C. Knipe and Martin D. Smith  
Organic & Biomolecular Chemistry 2014 vol. 12(Issue 28) pp:5094-5097
Publication Date(Web):13 Jun 2014
DOI:10.1039/C4OB00627E
A high-yielding and diastereoselective route to biologically significant 2-aryl- and 2-alkyl-3-amido dihydroquinolones has been developed in up to 90:10 e.r. by employing a novel Lewis acidic BINOL-derived copper(II) catalyst.
Co-reporter:Roly J. Armstrong ;Dr. Martin D. Smith
Angewandte Chemie 2014 Volume 126( Issue 47) pp:13036-13040
Publication Date(Web):
DOI:10.1002/ange.201408205

Abstract

A catalytic enantioselective nucleophilic aromatic substitution reaction which yields axially chiral biaryl derivatives in excellent yields with e.r. values of up to 97:3 has been developed. This process uses a chiral counterion to direct the addition of thiophenolate to a prochiral dichloropyrimidine by a tandem desymmetrization/kinetic resolution mechanism. The products can be derivatized to a range of atropisomeric structures without any reduction in enantioenrichment, thus offering access to unexplored chiral biaryl architectures.

Co-reporter:Shuyu Chu;Dr. Stephen Wallace ;Dr. Martin D. Smith
Angewandte Chemie International Edition 2014 Volume 53( Issue 50) pp:13826-13829
Publication Date(Web):
DOI:10.1002/anie.201409038

Abstract

A concise and efficient synthesis of (−)-gephyrotoxin from L-pyroglutaminol has been realized. The key step in this approach is a diastereoselective intramolecular enamine/Michael cascade reaction that forms two rings and two stereocenters and generates a stable tricyclic iminium cation. A hydroxy-directed reduction of this intermediate plays a key role in establishing the required cis-decahydroquinoline ring system, enabling the total synthesis of (−)-gephyrotoxin in nine steps and 14 % overall yield. The absolute configuration of the synthetic material was confirmed by single-crystal X-ray diffraction and is consistent with the structure originally proposed for material isolated from the natural source.

Co-reporter:Roly J. Armstrong ;Dr. Martin D. Smith
Angewandte Chemie International Edition 2014 Volume 53( Issue 47) pp:12822-12826
Publication Date(Web):
DOI:10.1002/anie.201408205

Abstract

A catalytic enantioselective nucleophilic aromatic substitution reaction which yields axially chiral biaryl derivatives in excellent yields with e.r. values of up to 97:3 has been developed. This process uses a chiral counterion to direct the addition of thiophenolate to a prochiral dichloropyrimidine by a tandem desymmetrization/kinetic resolution mechanism. The products can be derivatized to a range of atropisomeric structures without any reduction in enantioenrichment, thus offering access to unexplored chiral biaryl architectures.

Co-reporter:Dr. Craig P. Johnston ;Dr. Martin D. Smith
Angewandte Chemie International Edition 2014 Volume 53( Issue 13) pp:3315-3317
Publication Date(Web):
DOI:10.1002/anie.201400154
Co-reporter:Dr. Peter C. Knipe;Dr. Matija Gredi&x10d;ak;Artiom Cernijenko;Dr. Robert S. Paton;Dr. Martin D. Smith
Chemistry - A European Journal 2014 Volume 20( Issue 11) pp:3005-3009
Publication Date(Web):
DOI:10.1002/chem.201400192

Abstract

A cascade reaction that generates pyrrolo- and pyridoindoline motifs from isocyanide precursors under phase-transfer conditions is described. This transformation proceeds at room temperature in the presence of a quaternary ammonium catalyst and base to generate functionalized products containing an all-carbon quaternary stereocentre. Quantum chemical calculations demonstrated that intramolecular general acid catalysis plays a key accelerating role through stabilization of developing charge in the transition state, and that the reaction is best described as a 5-endo dig cyclization, rather than an anionic 6π electrocyclization. Investigations employing chiral phase-transfer catalysts have given promising selectivities to date.

Co-reporter:Dr. Craig P. Johnston ;Dr. Martin D. Smith
Angewandte Chemie 2014 Volume 126( Issue 13) pp:3381-3383
Publication Date(Web):
DOI:10.1002/ange.201400154
Co-reporter:Shuyu Chu;Dr. Stephen Wallace ;Dr. Martin D. Smith
Angewandte Chemie 2014 Volume 126( Issue 50) pp:14046-14049
Publication Date(Web):
DOI:10.1002/ange.201409038

Abstract

A concise and efficient synthesis of (−)-gephyrotoxin from L-pyroglutaminol has been realized. The key step in this approach is a diastereoselective intramolecular enamine/Michael cascade reaction that forms two rings and two stereocenters and generates a stable tricyclic iminium cation. A hydroxy-directed reduction of this intermediate plays a key role in establishing the required cis-decahydroquinoline ring system, enabling the total synthesis of (−)-gephyrotoxin in nine steps and 14 % overall yield. The absolute configuration of the synthetic material was confirmed by single-crystal X-ray diffraction and is consistent with the structure originally proposed for material isolated from the natural source.

Co-reporter:Meiling Li, Philip A. Woods and Martin D. Smith  
Chemical Science 2013 vol. 4(Issue 7) pp:2907-2911
Publication Date(Web):10 May 2013
DOI:10.1039/C3SC50592H
An asymmetric method for the synthesis of quaternary-substituted indolenines via a 5-endo-dig cyclization of an α-cyanocarbanion onto an isonitrile has been developed. This transformation relies on Brønsted acid activation of the isonitrile functional group under asymmetric phase transfer conditions in the presence of a Brønsted base. Good to excellent levels of enantioselectivity were obtained (85:15 to 96:4 e.r., 18 examples) using a bespoke bifunctional catalyst. Enantioenriched indolenines produced in this process can be intercepted by nucleophilic species with high levels of diastereoselectivity to generate complex indoline frameworks. This process offers a general asymmetric approach to reactions involving the isonitrile functional group.
Co-reporter:Christopher R. Jones ; Pranjal K. Baruah ; Amber L. Thompson ; Steve Scheiner
Journal of the American Chemical Society 2012 Volume 134(Issue 29) pp:12064-12071
Publication Date(Web):July 12, 2012
DOI:10.1021/ja301318a
Whether nonconventional hydrogen bonds, such as the C–H···O interaction, are a consequence or a determinant of conformation is a long-running and unresolved issue. Here we outline a solid-state and quantum mechanical study designed to investigate whether a C–H···O interaction can override the significant trans-planar conformational preferences of α-fluoroamide substituents. A profound change in dihedral angle from trans-planar(OCCF) to cis-planar(OCCF) observed on introducing an acceptor group for a C–H···O hydrogen bond is consistent with this interaction functioning as a determinant of conformation in certain systems. This testifies to the potential influence of the C–H···O hydrogen bond and is consistent with the assignment of this interaction as a contributor to overall conformation in both model and natural systems.
Co-reporter:Eleanor E. Maciver, Peter C. Knipe, Andrew P. Cridland, Amber L. Thompson and Martin D. Smith  
Chemical Science 2012 vol. 3(Issue 2) pp:537-540
Publication Date(Web):19 Oct 2011
DOI:10.1039/C1SC00697E
A catalytic enantioselective electrocyclic cascade leads to the construction of topologically complex systems comprising multiple rings with up to three stereocentres. This phase-transfer catalysed process offers a new strategy for the rapid and enantioselective generation of complex products bearing all-carbon quaternary stereogenic centres.
Co-reporter:Sam Thompson, Anthony G. Coyne, Peter C. Knipe and Martin D. Smith  
Chemical Society Reviews 2011 vol. 40(Issue 7) pp:4217-4231
Publication Date(Web):12 May 2011
DOI:10.1039/C1CS15022G
This critical review offers an overview of asymmetric electrocyclic processes, where diastereo- or enantioselectivity is a consequence of the influence of a chiral component (be it substrate or catalyst) on the electrocyclic bond-forming process (195 references).
Co-reporter:EleanorE. Maciver;Sam Thompson Dr. ;MartinD. Smith Dr.
Angewandte Chemie 2009 Volume 121( Issue 52) pp:10164-10167
Publication Date(Web):
DOI:10.1002/ange.200905169
Co-reporter:ChristopherR. Jones;G. DanPanto&x15f; Dr.;AngusJ. Morrison Dr.;MartinD. Smith Dr.
Angewandte Chemie International Edition 2009 Volume 48( Issue 40) pp:7391-7394
Publication Date(Web):
DOI:10.1002/anie.200903063
Co-reporter:EleanorE. Maciver;Sam Thompson Dr. ;MartinD. Smith Dr.
Angewandte Chemie International Edition 2009 Volume 48( Issue 52) pp:9979-9982
Publication Date(Web):
DOI:10.1002/anie.200905169
Co-reporter:Paula M. Tomlin, David J. Davies, Martin D. Smith
Tetrahedron: Asymmetry 2009 Volume 20(6–8) pp:961-969
Publication Date(Web):7 May 2009
DOI:10.1016/j.tetasy.2009.03.020
This paper describes studies on the feasibility of an asymmetric Favorskii rearrangement of a meso-dihaloketone substrate. In the racemic series, metal amide bases in the presence of amines give poor to reasonable yields of ring-contracted unsaturated cyclopentyl amides, whilst amines in aqueous solvent mixtures afford cyclopentyl amides in good to excellent yields. A range of chiral non-racemic amines are screened, a tiny diastereo-bias is observed and a tentative mechanistic rationale for the diastereoselective process is proposed.
Co-reporter:ChristopherR. Jones;G. DanPanto&x15f; Dr.;AngusJ. Morrison Dr.;MartinD. Smith Dr.
Angewandte Chemie 2009 Volume 121( Issue 40) pp:7527-7530
Publication Date(Web):
DOI:10.1002/ange.200903063
Co-reporter:Jamie R. Wolstenhulme, Alex Cavell, Matija Gredičak, Russell W. Driver and Martin D. Smith
Chemical Communications 2014 - vol. 50(Issue 88) pp:NaN13588-13588
Publication Date(Web):2014/09/15
DOI:10.1039/C4CC06683A
A cascade approach to complex pyrroloindolines bearing all-carbon quaternary stereocentres has been developed. This two-component process uses a chiral ammonium salt to control diastereo- and enantioselectivity in the addition of isocyanides to functionalized alkenes to afford pyrroloindolines with up to three stereocentres. A mechanistic proposal involving intramolecular hydrogen bond activation of the isocyanide is described.
Co-reporter:Sam Thompson, Anthony G. Coyne, Peter C. Knipe and Martin D. Smith
Chemical Society Reviews 2011 - vol. 40(Issue 7) pp:NaN4231-4231
Publication Date(Web):2011/05/12
DOI:10.1039/C1CS15022G
This critical review offers an overview of asymmetric electrocyclic processes, where diastereo- or enantioselectivity is a consequence of the influence of a chiral component (be it substrate or catalyst) on the electrocyclic bond-forming process (195 references).
Co-reporter:Meiling Li, Philip A. Woods and Martin D. Smith
Chemical Science (2010-Present) 2013 - vol. 4(Issue 7) pp:NaN2911-2911
Publication Date(Web):2013/05/10
DOI:10.1039/C3SC50592H
An asymmetric method for the synthesis of quaternary-substituted indolenines via a 5-endo-dig cyclization of an α-cyanocarbanion onto an isonitrile has been developed. This transformation relies on Brønsted acid activation of the isonitrile functional group under asymmetric phase transfer conditions in the presence of a Brønsted base. Good to excellent levels of enantioselectivity were obtained (85:15 to 96:4 e.r., 18 examples) using a bespoke bifunctional catalyst. Enantioenriched indolenines produced in this process can be intercepted by nucleophilic species with high levels of diastereoselectivity to generate complex indoline frameworks. This process offers a general asymmetric approach to reactions involving the isonitrile functional group.
Co-reporter:Peter C. Knipe and Martin D. Smith
Organic & Biomolecular Chemistry 2014 - vol. 12(Issue 28) pp:NaN5097-5097
Publication Date(Web):2014/06/13
DOI:10.1039/C4OB00627E
A high-yielding and diastereoselective route to biologically significant 2-aryl- and 2-alkyl-3-amido dihydroquinolones has been developed in up to 90:10 e.r. by employing a novel Lewis acidic BINOL-derived copper(II) catalyst.
Co-reporter:Eleanor E. Maciver, Peter C. Knipe, Andrew P. Cridland, Amber L. Thompson and Martin D. Smith
Chemical Science (2010-Present) 2012 - vol. 3(Issue 2) pp:NaN540-540
Publication Date(Web):2011/10/19
DOI:10.1039/C1SC00697E
A catalytic enantioselective electrocyclic cascade leads to the construction of topologically complex systems comprising multiple rings with up to three stereocentres. This phase-transfer catalysed process offers a new strategy for the rapid and enantioselective generation of complex products bearing all-carbon quaternary stereogenic centres.
D-Gluconic acid, 2,5-anhydro-6-deoxy-, methyl ester
D-MANNONIC ACID, 2,5-ANHYDRO-6-AZIDO-6-DEOXY-, METHYL ESTER
D-MANNONIC ACID, 2,5-ANHYDRO-, 1-METHYLETHYL ESTER (9CI)
D-GLUCONIC ACID, 2,5-ANHYDRO-6-DEOXY-3-O-(PHENYLMETHYL)-, METHYL ESTER
D-GLUCONIC ACID, 2,5-ANHYDRO-, 1-METHYLETHYL ESTER (9CI)
D-Mannonic acid, 2,5-anhydro-6-azido-6-deoxy-, 1-methylethyl ester
D-Mannonic acid, 2,5-anhydro-, methyl ester, 6-methanesulfonate
D-Gluconic acid, 2,5-anhydro-6-azido-6-deoxy-, methyl ester
D-Gluconic acid, 2,5-anhydro-6-azido-6-deoxy-, 1-methylethyl ester
3,4-Pyrrolidinediol, 2-[(1S)-1,2-dihydroxyethyl]-, (2S,3S,4S)-