Co-reporter:Jan-Niklas Schäckermann and Thomas Lindel
Organic Letters May 5, 2017 Volume 19(Issue 9) pp:
Publication Date(Web):April 20, 2017
DOI:10.1021/acs.orglett.7b00845
The eastern section of the macrocyclic marine natural product salarin C from the sponge Fascaplysinopsis sp. was synthesized employing a halogen dance reaction to assemble the trisubstituted oxazole moiety. The synthesis was inspired by Kashman’s hypothesis on the biomimetic oxidation of salarin C to salarin A. Clean conversion to the triacylamine partial structure of salarin A occurred on treatment with photochemically generated singlet oxygen. Thus, a Wasserman-type oxidative rearrangement is chemically possible in this case.
Co-reporter:Mario Kock, Peter G. Jones, and Thomas Lindel
Organic Letters December 1, 2017 Volume 19(Issue 23) pp:6296-6296
Publication Date(Web):November 17, 2017
DOI:10.1021/acs.orglett.7b03014
The first total synthesis of the bisindole alkaloid raputindole A from the rutaceous plant Raputia simulans is reported. The key step is a Au(I)-catalyzed cyclization that assembles the cyclopenta[f]indole tricycle from a 6-alkynylated indoline precursor. The isobutenyl side chain was installed by Suzuki–Miyaura cross-coupling, followed by a regioselective reduction employing LiDBB. Starting from 6-iodoindole, the sequence needs nine steps and provided (±)-raputindole A in 6.6% overall yield. The absolute configuration of the natural product (+)-raputindole A was determined by quantum chemical calculation of the ECD spectrum.
Co-reporter:Björn Raimer, Peter G. Jones, Thomas Lindel
Journal of Fluorine Chemistry 2014 Volume 166() pp:8-14
Publication Date(Web):October 2014
DOI:10.1016/j.jfluchem.2014.06.027
•Quantum chemical prediction of 19F NMR spectra.•E/Z assignment of oximes via 19F NMR spectroscopy.•19F NMR reference table of CF3 groups associated with photoaffinity labeling.Irradiation of aryl(trifluoromethyl)diazirines may result in a multitude of products, which are difficult to assign in the 19F NMR spectrum. In this article, it is demonstrated that an average accuracy of 2.9 ppm (standard deviation) can be achieved by quantum chemical calculations at the B3LYP 6-311G++(2d,2p) level of theory, followed by a Boltzmann weighting of the optimized conformers. A set of 30 compounds was investigated both experimentally and theoretically. 19F NMR chemical shifts of precursor Z-oximes and Z-tosyloximes ranged from δF −62.9 to −61.8 ppm, whereas their E counterparts showed shifts between δF −67.2 and −66.2 ppm. Stereochemical assignments were confirmed by two X-ray analyses. Quantum chemical calculation also allowed the assignment of the configuration of an (E,E) azine. Trifluoromethyl diazirines exhibited a δF between −66.1 and −65.6, diaziridines between −76.2 and −75.9 ppm. The smallest δF values were observed for α-oxygenated trifluoromethyl compounds (δF −78.9 to −77.4 ppm). The average deviation of the calculated from the experimental values corresponds to only about 1% of the standard 19F NMR chemical shift range.19F NMR chemical shifts of CF3 groups can be predicted with an average accuracy of 2.9 ppm by quantum chemical calculations at the affordable B3LYP 6-311G++(2d,2p) level of theory.
Co-reporter:Alex Sudakow;Dr. Uli Papke ;Dr. Thomas Lindel
Chemistry - A European Journal 2014 Volume 20( Issue 33) pp:10223-10226
Publication Date(Web):
DOI:10.1002/chem.201402959
Abstract
A novel photoarylation of amino acids and peptides is described, which tolerates the presence of water. Irradiation of Boc-protected amino acids in the presence of N-protected 2-azidobenzimidazoles leads to selective arylation of carboxy termini or side chains. The new reaction also works for peptides. Irradiation of the nonapeptide H-SPSYVYHQF-OH also resulted in selective arylation of the tyrosine side chains, as indicated by ESI-MS/MS fragmentation. Chemo- and regioselectivity could add the title reaction to the repertoire of photoaffinity labeling methods.
Co-reporter:Alex Sudakow;Peter G. Jones
European Journal of Organic Chemistry 2012 Volume 2012( Issue 4) pp:681-684
Publication Date(Web):
DOI:10.1002/ejoc.201101711
Abstract
Irradiation of N-benzylated 2-azidobenzimidazoles at 300 nm in the presence of an excess amount of carboxylic acids results in a novel regioselective synthesis of 2-amino-6-oxybenzimidazoles in isolated yields of 60–70 %. It is also possible to regioselectively introduce 6-bromo, 6-chloro, and 6-triflyloxy groups. Irradiation in dichloromethane in the absence of external nucleophiles revealed that after loss of nitrogen, the benzimidazolylnitrene probably undergoes coarctate ring opening to an N-cyano diaza-o-xylylene intermediate.
Co-reporter:Rare&x15f;-Petru Moldovan;Michael Zöllinger;Peter G. Jones;Gerhard Kelter;Heinz-Herbert Fiebig
European Journal of Organic Chemistry 2012 Volume 2012( Issue 4) pp:685-698
Publication Date(Web):
DOI:10.1002/ejoc.201101175
Abstract
A structure–activity relationship study of ring C-functionalized derivatives of the cytotoxic marine natural product(–)-dibromophakellstatin from the sponge Phakellia mauritiana is reported. Functionalization of the pyrrolidine ring was achieved starting from the hydroxy derivative by conversion to the triflate followed by etherification by epimerizing nucleophilic substitution. We identified (12R)-dibromo-12-hydroxyphakellstatin as the most cytotoxic derivative, which exhibited an average IC50 value of 1.4 μM against a panel of twelve human cancer cell lines. However, the 12S diastereomer was inactive. Dehydrophakellstatin was synthesized as the first example of a phakellin skeleton with an unsaturated ring C.
Co-reporter:Kristina Simon;Peter G. Jones
European Journal of Organic Chemistry 2011 Volume 2011( Issue 8) pp:1493-1503
Publication Date(Web):
DOI:10.1002/ejoc.201001315
Abstract
The glucosylated monoterpenoids (–)-rhodioloside A and (–)-rhodioloside D from the roseroot (Rhodiola rosea) have been synthesized for the first time. Glucosylation with tetrapivaloylglucosyl bromide proved superior to the use of tetraacetylglucosyl bromide or glucosyl iodides. Acid-catalyzed cyclization of a homoglycidol-type geraniol derivative afforded the monoterpenoid tetrahydrofuran (+)-sachalinol C from Rhodiola sachalinensis. The absolute configuration of (+)-sachalinol C requires revision. (–)-Sachalinol A and (–)-sachalinol B were also obtained.
Co-reporter:Elisabeth Schöttner, Maren Wiechoczek, Peter G. Jones and Thomas Lindel
Organic Letters 2010 Volume 12(Issue 4) pp:784-787
Publication Date(Web):January 19, 2010
DOI:10.1021/ol902854t
The fully substituted 12-membered macrocycle of the cubitane-type diterpenoids has been assembled in an enantioselective manner following a novel “bridge-and-cut” strategy. Hydroxyalkylation of (S)-carvone afforded a carvonylgeraniol, which underwent transannular cyclization on treatment with samarium diiodide in THF. Fragmentation of one of the shorter bridges of the resulting [8.2.2]bicycle liberated the 12-membered ring with the desired cis-arrangement of the isopropenyl side chains.
Co-reporter:Nicolas Jacobi
European Journal of Organic Chemistry 2010 Volume 2010( Issue 28) pp:5415-5425
Publication Date(Web):
DOI:10.1002/ejoc.201000625
Abstract
As characteristic structural elements of several of the non-monomeric pyrrole-imidazole alkaloids, 1,1-bis(imidazolyl)propenes were assembled in a facile manner by double Grignard reaction of metalated imidazoles with saturated esters, followed by dehydration. The presence of nitrile functions or acryl esters in the electrophile component leads to competing reactions, whereas propargyl esters are tolerated. Introduction of 2-amino groups was possible via the corresponding dimethylsulfamoyl-protected 2-azidoimidazoles, which had to be deprotected prior to hydrogenation. NOESY-based analysis revealed preferred orientation of the imidazole 5-positions towards the propenyl chain.
Co-reporter:Thomas Lindel, Delphine E.N. Jacquot, Michael Zöllinger, Robin B. Kinnel, Shayna McHugh, Matthias Köck
Tetrahedron Letters 2010 Volume 51(Issue 48) pp:6353-6355
Publication Date(Web):1 December 2010
DOI:10.1016/j.tetlet.2010.09.148
The absolute stereochemistry of the immunosuppressive pyrrole–imidazole alkaloid (−)-palau’amine from the marine sponge Stylotella aurantium is analyzed by CD spectroscopy. With the help of a series of model compounds it is shown that the CD spectrum of (−)-palau’amine can be explained based on the assumption that the pyrrolopyrazinone partial structure is planar in 2,2,2-trifluoroethanol (TFE). Surprisingly, the natural product (−)-dibromophakellin shows the opposite Cotton effect, despite exhibiting the same absolute configuration.
Co-reporter:Matthias Köck PD Dr. Dr.
Angewandte Chemie International Edition 2007 Volume 46(Issue 28) pp:
Publication Date(Web):2 JUL 2007
DOI:10.1002/anie.200702455
Co-reporter:Matthias Köck Priv.-Doz. Dr. Dr.
Angewandte Chemie 2007 Volume 119(Issue 28) pp:
Publication Date(Web):2 JUL 2007
DOI:10.1002/ange.200702455