Tadashi Katoh

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Organization: Tohoku Pharmaceutical University
Department: Laboratory of Synthetic and Medicinal Chemistry, Faculty of Pharmaceutical Sciences
Title:
Co-reporter:Yurie Fukui, Koichi Narita, Singo Dan, Takao Yamori, Akihiro Ito, Minoru Yoshida, Tadashi Katoh
European Journal of Medicinal Chemistry 2014 Volume 76() pp:301-313
Publication Date(Web):9 April 2014
DOI:10.1016/j.ejmech.2014.02.044
•Burkholdacs A and B and 5,6,20-tri-epi-burkholdac A were synthesized.•These compounds were evaluated against HDACs and 39 human cancer cell lines.•Burkholdacs A and B showed potent HDAC1 inhibitory and antiproliferative activities.•Burkholdacs A and B showed very high HDAC1 (class I) isoform selectivity.•Novel aspects of SAR were revealed.The bicyclic depsipeptide histone deacetylase (HDAC) inhibitors burkholdacs A and B were efficiently synthesized in a highly convergent and unified manner. The synthesis features the amide coupling of a d-valine-d-cysteine- or d-allo-isoleucine-d-cysteine-containing segment with a d-methionine-containing segment to directly assemble the corresponding seco-acids, key precursors for macrolactonization. Using the same methodology, 5,6,20-tri-epi-burkholdac A was also synthesized. HDAC inhibitory assays and cell-growth inhibition analyses of the synthesized depsipeptides demonstrated the potency order of this class of bicyclic depsipeptides as compared to the clinically approved depsipeptide FK228 (romidepsin). Novel structure–activity relationships within this class of compounds were also revealed.
Co-reporter:Takeru Katoh;Hiromitsu Monma;Jun Wakasugi;Koichi Narita
European Journal of Organic Chemistry 2014 Volume 2014( Issue 32) pp:7099-7103
Publication Date(Web):
DOI:10.1002/ejoc.201403064

Abstract

A pharmaceutically important natural product, β-lapachone, was efficiently synthesized in four steps in 70 % overall yield starting from commercially available 1,4-naphthoquinone. The key step of the synthesis was the direct conversion of 2-prenyl-1,4-naphthoquinone into β-lapachone through an advantageous cyclization/hydration/oxidation cascade process.

Co-reporter:Takaaki Kamishima;Takuya Kikuchi;Koichi Narita
European Journal of Organic Chemistry 2014 Volume 2014( Issue 16) pp:3443-3450
Publication Date(Web):
DOI:10.1002/ejoc.201402082

Abstract

A biologically attractive and structurally unique marine natural product, (+)-liphagal, was biomimetically synthesized in 29 % overall yield in a longest linear sequence of 13 steps from commercially available (+)-sclareolide. This synthesis involved the following crucial steps: (i) stereocontrolled hydrogenation of an endo-olefinic decalin to install the C8 stereogenic centre present in the requisite decalin segment; (ii) coupling of the decalin segment with an aromatic moiety to assemble the desired carbon skeleton; (iii) ring expansion of a proposed biogenetic intermediate followed by benzofuran formation to establish the requisite tetracyclic core structure. A few new aspects of the proposed biosynthetic pathway to this class of natural products were revealed.

Co-reporter:Yurie Fukui;Koichi Narita ;Dr. Tadashi Katoh
Chemistry - A European Journal 2014 Volume 20( Issue 9) pp:2436-2439
Publication Date(Web):
DOI:10.1002/chem.201304809

Abstract

Dysidavarone A, a structurally unprecedented sesquiterpenoid quinone, was synthesized in 30 % overall yield in a longest liner sequence of 13 steps from commercially available o-vanillin. A highly strained and bridged eight-membered carbocyclic core was established by the C7C21 carbon bond formation through a copper enolate mediated Michael addition to the internal quinone ring.

Co-reporter:Takaaki Kamishima;Takuya Kikuchi
European Journal of Organic Chemistry 2013 Volume 2013( Issue 21) pp:4558-4563
Publication Date(Web):
DOI:10.1002/ejoc.201300438

Abstract

A biologically attractive and structurally unique marine natural product, (+)-strongylin A (1), was synthesized for the first time by starting from a known trans-decalone derivative (19 % overall yield in 11 steps). The synthetic method involved the following key steps: (i) stereocontrolled hydrogenation of an exo-olefinic decalin to install the C8 stereogenic centre present in the required decalin segment; (ii) coupling of the decalin segment with an aromatic moiety to assemble the desired carbon skeleton; and (iii) sequential BF3·Et2O-induced dehydroxylation/rearrangement/cyclization of a decalin tertiary alcohol to directly produce target compound 1. This total synthesis has established the absolute configuration of the natural product.

Co-reporter:Koichi Narita;Ken Nakamura;Yui Abe
European Journal of Organic Chemistry 2011 Volume 2011( Issue 26) pp:4985-4988
Publication Date(Web):
DOI:10.1002/ejoc.201100845

Abstract

Bauhinoxepin J possessing antimycobacterial, antimalarial, and tumor growth inhibitory activities was efficiently synthesized. The method involves crucial steps, including a coupling reaction of two aromatic moieties to construct the desired carbon framework, chemoselective phenol oxidation of a bisphenol derivative to establish a key cyclization precursor, and construction of a characteristic seven-membered dihydrooxepin ring by internal cyclization to yield the target bauhinoxepin J.

Co-reporter:Takuya Kikuchi;Mayuko Mineta;Jingo Ohtaka;Naoko Matsumoto
European Journal of Organic Chemistry 2011 Volume 2011( Issue 26) pp:5020-5030
Publication Date(Web):
DOI:10.1002/ejoc.201100517

Abstract

Potential immunosuppressive diterpenoid pyrones (–)-subglutinols A and B were efficiently synthesized in an enantioselective manner starting from a known trans-decalone derivative. The synthetic method involved the following key steps: (i) [2,3]-Wittig rearrangement of a stannyl methyl ether to access the requisite decalin segment; (ii) coupling of the decalin segment with a γ-pyrone moiety to set up the desired carbon framework; (iii) construction of a characteristic tetrahydrofuran ring in one-pot fashion through an internal SN2-type cyclization, and (iv) conversion of a γ-pyrone moiety into an α-pyrone ring to yield the target (–)-subglutinols A and B.

Co-reporter:Junji Sakurai;Takuya Kikuchi;Ohgi Takahashi;Kazuhiro Watanabe
European Journal of Organic Chemistry 2011 Volume 2011( Issue 16) pp:2948-2957
Publication Date(Web):
DOI:10.1002/ejoc.201100173

Abstract

A novel and potent hemagglutinin inhibitor, (+)-stachyflin, was efficiently synthesized in an enantioselective manner starting from the (+)-5-methyl-Wieland–Miescher ketone. The synthetic method features a BF3·Et2O-induced cascade epoxide-opening/rearrangement/cyclization reaction tostereoselectively construct the requisite pentacyclic ring system in one step. In order to rationalize the mechanism of the cascade reaction, quantum chemical calculations of the possible intermediary carbocations and transition states in the model synthesis were carried out. An alternative approach to synthesize (+)-stachyflin by employing a similar cascade reaction was also described.

Co-reporter:Kazuhiro Watanabe, Tadashi Katoh
Tetrahedron Letters 2011 Volume 52(Issue 41) pp:5395-5397
Publication Date(Web):12 October 2011
DOI:10.1016/j.tetlet.2011.08.049
In this Letter, a selective deprotection of the alcohol protecting 3,4-dimethoxybenzyl (3,4DMB) group is described. The hypervalent iodine(III) reagent phenyliodine bis(trifluoroacetate) (PIFA) is found to be an efficient reagent for the chemoselective deprotection of 3,4DMB ethers in the presence of benzyl, p-methoxybenzyl, methoxymethyl, tert-butyldimethylsilyl, and tert-butyldiphenylsilyl ethers under mild conditions. This is the first example of the selective deprotection of the 3,4DMB group from a hydroxy group with PIFA.
Co-reporter:Kazuhiro Watanabe, Junji Sakurai, Hideki Abe and Tadashi Katoh  
Chemical Communications 2010 vol. 46(Issue 23) pp:4055-4057
Publication Date(Web):01 Apr 2010
DOI:10.1039/C000193G
The first enantioselective total synthesis of (+)-stachyflin, a potential anti-influenza A virus agent, was achieved; the method features a BF3·Et2O-induced domino epoxide-opening/rearrangement/cyclization reaction to stereoselectively form the requisite pentacyclic ring system in one step.
Co-reporter:Koichi Narita;Takuya Kikuchi;Kazuhiro Watanabe Dr.;Toshiya Takizawa Dr.;Takamasa Oguchi Dr.;Kyosuke Kudo;Keisuke Matsuhara;Hideki Abe Dr.;Takao Yamori Dr.;Minoru Yoshida Dr. Dr.
Chemistry - A European Journal 2009 Volume 15( Issue 42) pp:11174-11186
Publication Date(Web):
DOI:10.1002/chem.200901552

Abstract

The bicyclic depsipeptide histone deacetylase (HDAC) inhibitors spiruchostatins A and B, 5′′-epi-spiruchostatin B and FK228 were efficiently synthesized in a convergent and unified manner. The synthetic method involved the following crucial steps: i) a Julia–Kocienski olefination of a 1,3-propanediol-derived sulfone and a L- or D-malic acid-derived aldehyde to access the most synthetically challenging unit, (3S or 3R,4E)-3-hydroxy-7-mercaptohept-4-enoic acid, present in a D-alanine- or D-valine-containing segment; ii) a condensation of a D-valine-D-cysteine- or D-allo-isoleucine-D-cysteine-containing segment with a D-alanine- or D-valine-containing segment to directly assemble the corresponding seco-acids; and iii) a macrocyclization of a seco-acid using the Shiina method or the Mitsunobu method to construct the requisite 15- or 16-membered macrolactone. The present synthesis has established the C5′′ stereochemistry of spiruchostatin B. In addition, HDAC inhibitory assay and the cell-growth inhibition analysis of the synthesized depsipeptides determined the order of their potency and revealed some novel aspects of structure–activity relationships. It was also found that unnatural 5′′-epi-spiruchostatin B shows extremely high selectivity (ca. 1600-fold) for class I HDAC1 (IC50=2.4 nM) over class II HDAC6 (IC50=3900 nM) with potent cell-growth-inhibitory activity at nanomolar levels of IC50 values.

Co-reporter:Takamasa Oguchi;Kazuhiro Watanabe Dr.;Kôichi Ohkubo;Hideki Abe Dr. Dr.
Chemistry - A European Journal 2009 Volume 15( Issue 12) pp:2826-2845
Publication Date(Web):
DOI:10.1002/chem.200802122
Co-reporter:Toshiya Takizawa, Kazuhiro Watanabe, Koichi Narita, Takamasa Oguchi, Hideki Abe and Tadashi Katoh  
Chemical Communications 2008 (Issue 14) pp:1677-1679
Publication Date(Web):05 Feb 2008
DOI:10.1039/B718310K
The first total synthesis of spiruchostatin B, a potent histone deacetylase inhibitor, was achieved in a convergent manner; the synthesis established stereochemistry at the C5″ position.
Co-reporter:Junji Sakurai;Takamasa Oguchi;Kazuhiro Watanabe Dr.;Hideki Abe Dr.;Syu-ichi Kanno Dr.;Masaaki Ishikawa Dr. Dr.
Chemistry - A European Journal 2008 Volume 14( Issue 3) pp:829-837
Publication Date(Web):
DOI:10.1002/chem.200701386

Abstract

Biologically important and structurally unique marine natural products avarone (1), avarol (2), neoavarone (3), neoavarol (4) and aureol (5), were efficiently synthesized in a unified manner starting from (+)-5-methyl-Wieland–Miescher ketone 10. The synthesis involved the following crucial steps: i) Sequential BF3⋅Et2O-induced rearrangement/cyclization reaction of 2 and 4 to produce 5 with complete stereoselectivity in high yield (2 5 and 4 5); ii) strategic salcomine oxidation of the phenolic compounds 6 and 8 to derive the corresponding quinones 1 and 3 (6 1 and 8 3); and iii) Birch reductive alkylation of 10 with bromide 11 to construct the requisite carbon framework 12 (10 + 11 12). An in vitro cytotoxicity assay of compounds 15 against human histiocytic lymphoma cells U937 determined the order of cytotoxic potency (3 > 1 > 5 > 2 > 4) and some novel aspects of structure-activity relationships.

Co-reporter:Hiroshi Araki Dr.;Munenori Inoue Dr.;Takeyuki Suzuki  Dr.;Takao Yamori  Dr.;Michiaki Kohno  Dr.;Kazuhiro Watanabe Dr.;Hideki Abe Dr.  Dr.
Chemistry - A European Journal 2007 Volume 13(Issue 35) pp:
Publication Date(Web):18 SEP 2007
DOI:10.1002/chem.200700789

Enantioselective total synthesis of (+)-ottelione A (1) and (−)-ottelione B (2), novel and potent antitumor agents from a freshwater plant, and (+)-3-epi-ottelione A (3), the earlier proposed stereostructure of 1, was efficiently achieved starting from the known tricyclic compound 10. The synthesis involved the following key steps: i) coupling reactions of aldehydes 8 and 9 with the aromatic portion 7 (8+715 and 9+727), ii) base-induced hemiacetal-opening/epimerization reactions of the cyclic hemiacetals 6 and 27 (617 and 27 a26 a), and iii) Corey–Winter's reductive olefination of the cyclic thiocarbonates 21 and 36 (2122 and 3637). The present total synthesis fully established the absolute configuration of these natural products. The cell growth inhibition profile, COMPARE analysis, and tubulin inhibitory assay of (+)-3-epi-ottelione A (3) and its O-acetyl derivative 24 demonstrated that these unnatural substances could be prominent lead compounds for the development of anticancer agents with a novel mode of action.

Co-reporter:Munenori Inoue Dr.;Wakako Yokota;Modachur G. Murugesh Dr.;Takashi Izuhara Dr. Dr.
Angewandte Chemie International Edition 2004 Volume 43(Issue 32) pp:
Publication Date(Web):9 AUG 2004
DOI:10.1002/anie.200454192

The five crucial steps in the first total synthesis of (+)-scyphostatin from D-arabinose involve (see picture): a) stereoselective aldol coupling to form a quaternary stereocenter, b) ring-closing metathesis (RCM) to construct the cyclohexene ring, c) Negishi coupling for the preparation of the fatty acid side chain, d) amide formation to connect the cyclohexene and fatty acid segments, e) stereospecific epoxide-ring formation.

Co-reporter:Munenori Inoue Dr.;Wakako Yokota;Modachur G. Murugesh Dr.;Takashi Izuhara Dr. Dr.
Angewandte Chemie 2004 Volume 116(Issue 32) pp:
Publication Date(Web):9 AUG 2004
DOI:10.1002/ange.200454192

Die fünf wesentlichen Schritte der ersten Totalsynthese von (+)-Scyphostatin aus D-Arabinose (siehe Bild) sind a) eine stereoselektive Aldolkupplung, um ein quartäres Stereozentrum zu erzeugen, b) eine Ringschlussmetathese zum Aufbau des Cyclohexenrings, c) eine Negishi-Kupplung, um die Fettsäureseitenkette zu erhalten, d) eine Amidbildung, um Cyclohexen- und Fettsäuresegment zu verknüpfen, sowie e) eine stereospezifische Epoxidringbildung.

Co-reporter:Toshiya Takizawa, Kazuhiro Watanabe, Koichi Narita, Takamasa Oguchi, Hideki Abe and Tadashi Katoh
Chemical Communications 2008(Issue 14) pp:NaN1679-1679
Publication Date(Web):2008/02/05
DOI:10.1039/B718310K
The first total synthesis of spiruchostatin B, a potent histone deacetylase inhibitor, was achieved in a convergent manner; the synthesis established stereochemistry at the C5″ position.
Co-reporter:Kazuhiro Watanabe, Junji Sakurai, Hideki Abe and Tadashi Katoh
Chemical Communications 2010 - vol. 46(Issue 23) pp:NaN4057-4057
Publication Date(Web):2010/04/01
DOI:10.1039/C000193G
The first enantioselective total synthesis of (+)-stachyflin, a potential anti-influenza A virus agent, was achieved; the method features a BF3·Et2O-induced domino epoxide-opening/rearrangement/cyclization reaction to stereoselectively form the requisite pentacyclic ring system in one step.
Histone deacetylase 6
dysidavarone A
1H-Benzo[b]benzo[6,7]cyclohepta[1,2-d]furan-9-carboxaldehyde, 2,3,4,4a,5,6,7,12c-octahydro-10,11-dihydroxy-4,4,7,12c-tetramethyl-, (4aS,7R,12cS)-
2H-Pyran-2-one,3-[[(2S,3aS,5aR,6R,9aR,9bS)-dodecahydro-5a,9b-dimethyl-7-methylene-2-(2-methyl-1-propen-1-yl)naphtho[2,1-b]furan-6-yl]methyl]-4-hydroxy-5,6-dimethyl-
2H-Pyran-2-one,3-[[(2R,3aS,5aR,6R,9aR,9bS)-dodecahydro-5a,9b-dimethyl-7-methylene-2-(2-methyl-1-propen-1-yl)naphtho[2,1-b]furan-6-yl]methyl]-4-hydroxy-5,6-dimethyl-
(-)-nalanthalide
Benzaldehyde, 2-[[(1,1-dimethylethyl)dimethylsilyl]oxy]-3-methoxy-
Phosphatidylinositol 3-kinase
Hexanoic acid, 4-[[(1,1-dimethylethoxy)carbonyl]amino]-5-methyl-3-oxo-, ethyl ester, (S)-
Pyranone