Co-reporter:Zhongyi Yuan, Yi Xiao, Yang Yang, and Tao Xiong
Macromolecules April 12, 2011 Volume 44(Issue 7) pp:1788-1791
Publication Date(Web):March 4, 2011
DOI:10.1021/ma1026252
Co-reporter:Xinbo Song;Ning Li;Chao Wang
Journal of Materials Chemistry B 2017 vol. 5(Issue 2) pp:360-368
Publication Date(Web):2017/01/04
DOI:10.1039/C6TB02524B
It is meaningful to accurately quantify the changes in local viscosity within the mitochondria of living cells, because viscosity influences mitochondrial network organization and metabolite diffusion. Although many molecular probes targeting mitochondria have been reported, almost all of them are not fixed to the mitochondria. Thus, they may not be suitable for sensing in abnormal mitochondria with lowered potential. In order to monitor viscosity in all mitochondria, no matter their working or health status, we develop the first fixable BODIPY (boron-dipyrromethene) rotor, named Vis-A. Vis-A contains an aldehyde group as an anchor to react with amino groups of proteins, which make it immobilizable in mitochondria. Vis-B, the reference compound without such anchor unit, is also synthesized. Both Vis-A and Vis-Bshow excellent mitochondrial targetability, as good as the commercially available mitochondrial dye (Mito Tracker Deep Red). However, when cells are chemically treated to decrease the mitochondrial potential, only Vis-A continues emitting strong fluorescence in mitochondria, but the signals of Vis-B and Mito Tracker Deep Red completely disappear. This comparison confirms that Vis-A not only specifically localizes in mitochondria, but also can be stably retained there. Then, Vis-A is applied to detect the mitochondrial viscosity of living cells by Fluorescence Lifetime Imaging (FLIM). Especially, with the aid of Vis-A, the changes in viscosity under typical pathological conditions (i.e., treatment with rotenone and carbonylcyanide-m-chlorophenylhydrazone (CCCP)) for mitochondria are monitored by FLIM.
Co-reporter:Helin Wang;Lingcheng Chen
Journal of Materials Chemistry C 2017 vol. 5(Issue 48) pp:12816-12824
Publication Date(Web):2017/12/14
DOI:10.1039/C7TC04726F
Herein, two perylene diimide (PDI) trimer arrays (bbb-3PDI and obo-3PDI), which are coupled at different reactive positions of the PDI monomer, have been efficiently synthesized and comprehensively investigated. The photophysical and electrochemical properties indicate that these two compounds exhibit much strong absorption in the visible region and suitable lowest unoccupied molecular orbital (LUMO) levels. In addition, the density functional theory (DFT) calculations indicate that the compound bbb-3PDI possesses stronger abilities of accepting electrons from donors and donating holes to the donor materials; thus, this compound is beneficial for exciton dissociation in OSCs. Upon choosing an appropriate energy level alignment and PTB7-Th with well-matched absorption as electron donors, the active layer of PTB7-Th:bbb-3PDI exhibits favorable morphology, higher carrier mobilities, and more balanced carrier transport. As a result, the device based on PTB7-Th:bbb-3PDI shows a high power conversion efficiency (PCE) of 7.12% and a high short circuit current (JSC) of 18.13 mA cm−2, which are the highest values obtained for the PDI-array-based non-fullerene OSCs. The obtained performance based on bbb-3PDI is significantly higher than those of obo-3PDI (4.55%) and the PDI dimer arrays; this highlights the potential of the PDI trimer arrays to realize high-efficiency non-fullerene OSCs.
Co-reporter:Helin Wang;Lingcheng Chen
Journal of Materials Chemistry C 2017 vol. 5(Issue 34) pp:8875-8882
Publication Date(Web):2017/08/31
DOI:10.1039/C7TC03171H
A new family of perylene diimide (PDI) arrays, heterologous ones (di-PDI and tri-PDI), were designed and efficiently synthesized by Suzuki cross-coupling reactions using two heterologous PDI monomers with different positions of bay- and ortho-substitution, respectively. The compounds exhibit unique photophysical and electrochemical properties and were successfully applied in non-fullerene organic solar cells with a superior power conversion efficiency of 4.55% for tri-PDI.
Co-reporter:Xinbo Song;Hui Bian;Chao Wang;Mingyu Hu;Ning Li
Organic & Biomolecular Chemistry 2017 vol. 15(Issue 38) pp:8091-8101
Publication Date(Web):2017/10/04
DOI:10.1039/C7OB01698K
Near-infrared (NIR) fluorescent probes are advantageous over visible ones, for they can avoid the interference from the short-wavelength background emission in biological systems. However, there are a very limited number of NIR probes that can specifically label target proteins in living cells. In this work, a series of long-wavelength dyes (N-NIR, S-NIR, and K-NIR) analogous to the novel Changsha NIR family are synthesized conveniently through a new approach that is different from the previously reported one. These three dyes have similar conjugation structures but exhibit tunable photophysical properties. N-NIR and S-NIR have large extinction coefficients over 100 000, and high fluorescence quantum yields. Although NIR absorption and emission of K-NIR are inferior to the former two, it emits in a much longer wavelength region. And all the three dyes can easily pass through the cell membranes to obtain the high-resolution NIR fluorescence images. Furthermore, N-NIR is chosen as the NIR fluorophore to develop a protein-labeling reagent PYBG-D, since it demonstrates the highest fluorescence quantum yield of up to 0.4 (in methanol). PYBG-D is efficiently synthesized through Sonogashira coupling between bromo-substituted N-NIR and alkyne-substituted benzylguanine (PYBG). The conjugate PYBG-D proves to be a specific and efficient label for O6-alkylguanine-DNA alkyltransferase (SNAP-tag) that fused to target proteins in living cells, which contributes to high resolution NIR fluorescence images under a laser confocal microscope.
Co-reporter:Fu Yang, Chao Wang, Lu Wang, Zhi-Wei Ye, ... Yi Xiao
Chinese Chemical Letters 2017 Volume 28, Issue 10(Volume 28, Issue 10) pp:
Publication Date(Web):1 October 2017
DOI:10.1016/j.cclet.2017.07.030
A ratiometric fluorescent sensor (Hoe-NI) was developed by connecting a nucleus targeted Hoechst unit to a naphthalimide dye via “click chemistry”. The sensor achieves high specific nucleus labeling with wash-free staining method in various kinds of living cells. The fluorescence ratio of the two emission bands (450 nm for Hoechst and 505 nm for naphthalimide) is changed sensitively to the variation of DNA concentrations, which provides the quantitative information in the processes of DNA damage induced by hydroxyl radicals and antitumor drug. Therefore, Hoe-NI is a recommendable sensor for the monitoring of nuclear DNA damage that reveals the health status of cells.Download high-res image (133KB)Download full-size imageA ratiometric fluorescent sensor (Hoe-NI) was developed for high specific nucleus labeling and monitoring of nuclear DNA damage in living cells.
Co-reporter:Helin Wang, Lingcheng Chen, Zhenbo Zhao, Yi Xiao
Dyes and Pigments 2017 Volume 144(Volume 144) pp:
Publication Date(Web):1 September 2017
DOI:10.1016/j.dyepig.2017.05.030
A series of aryl-bisalkynyl bridged perylene diimides derivatives were efficiently synthesized through the Sonogashira-type coupling reaction, and their photophysical, electrochemical and electron-transporting properties were investigated in detail. With the introduction of aryl-bisalkynyl groups, their absorption spectra exhibit extra strong absorption in the short wavelength region and therefore realizing broad wavelength range from 300 to 700 nm, which can overcome the weakness of narrow half-peak width of N,N'-bis(1-ethylpropyl)perylene-3,4,9,10-tetracarboxylic acid bisimides (PDI). The lowest unoccupied molecular orbital (LUMO) levels (about −4.00 eV) are lower than that of the prototype PDI, which make them potential for excellent electron-transporting materials. As a result, the improved electron mobilities of 10−4 cm2 V−1 s−1, which is three orders of magnitude higher than that of PDI, were obtained in space charge limited current (SCLC) devices.
Co-reporter:Guli Li, Bei Zhang, Xinbo Song, Ying Xia, Haibo Yu, Xinfu Zhang, Yi Xiao, Youtao Song
Sensors and Actuators B: Chemical 2017 Volume 253(Volume 253) pp:
Publication Date(Web):1 December 2017
DOI:10.1016/j.snb.2017.06.065
•A novel strategy used to design ratiometric fluorescent probe (FDI) based on fluorescein fluorophore.•FDI provided ratiometric detection by CLSM in dual excitation/dual emission mode.•FDI exhibited excellent and fast cell-membrane permeability and mitochondrial-targetability.•It would be a potential tool to assess pH fluctuation in mitochondria of live cells.Mitochondrial pH plays a pivotal role in the regulation of physiological process. Developing ratiometric fluorescent probes for real-time detection of mitochondrial pH fluctuation is still highly demanded yet challenging. Herein, we present a novel strategy to design a ratiometric probe (FDI) by broadening absorption spectrum (360–700 nm) of fluorescein fluorophore. Unsaturated dialkene/indole quaternary ammonium moiety has broadened absorption and emission spectrum of fluorescein fluorophore to provide ratiometric detection by CLSM in dual excitation/dual emission mode, as well as directionally accumulated in mitochondria in living cells. Superior to commercially mitochondrial tracker, Carboxy-SNARF, probe FDI exhibits excellent and fast cell-membrane permeability and mitochondrial-targetability. It has been demonstrated that FDI could permit real-time monitoring of pH alkalization of mitochondria stimulated by chloroquine. Owing to nondestructive process and reversible ratiometric response to pH, image acquisition can be repeated frequently to trace and monitor the time course of mitochondrial pH responses. It is clearly confirmed that FDI would be a promising probe for real-time tracking of mitochondrial pH changes in the biomedical and biological fields.Download high-res image (177KB)Download full-size image
Co-reporter:Helin Wang;Lingcheng Chen
Journal of Materials Chemistry A 2017 vol. 5(Issue 42) pp:22288-22296
Publication Date(Web):2017/10/31
DOI:10.1039/C7TA06804B
A simple molecular structure of ortho-derived perylene diimide (PDI) diploid (oo-2PDI), a PDI derivative, as well as two bay-derived PDI diploids (bb-2PDI and bo-2PDI), was designed and efficiently synthesized by efficient Ullmann coupling reactions. The photophysical and electrochemical properties indicate that oo-2PDI exhibits much stronger absorption than bb-2PDI in the visible region and a slightly higher lowest unoccupied molecular orbital (LUMO) level, which are beneficial for harvesting much sunlight and improving open circuit voltage in the organic solar cell (OSC) devices. On using PTB7-Th with appropriate energy level alignment and well matched absorption as the electron donor, the active layer of PTB7-Th:oo-2PDI exhibits a favorable morphology, higher carrier mobilities and more balanced carrier transport. As a result, the device based on PTB7-Th:oo-2PDI shows a power conversion efficiency (PCE) as high as 8.30% and a high short circuit current (JSC) of 18.79 mA cm−2, which are much higher than those of the other two PDI diploids (bb-2PDI and bo-2PDI), highlighting the potential of ortho-derived PDI diploid to realize high efficiency non-fullerene OSCs. Such a concise molecular structure and the high efficiency make this compound promising for practical applications in OSCs.
Co-reporter:Chao Wang, Xinbo Song, Lingcheng Chen, Yi Xiao
Biosensors and Bioelectronics 2017 Volume 89(Part 2) pp:757-764
Publication Date(Web):15 March 2017
DOI:10.1016/j.bios.2016.11.018
•Synthesis of a hybrid sensor for protein specific micro-viscosity sensing.•Probe show efficiently labeling of SNAP-tag and sensitivity to viscosity changes.•Viscosities nearby several proteins are distinctive.•Histone viscosity changes differently in three drug-induced apoptosis processes.Viscosity, as one of the major factors of intracellular microenvironment, influences the function of proteins. To detect local micro-viscosity of a protein, it is a precondition to apply a viscosity sensor for specifically target to proteins. However, all the reported small-molecule probes are just suitable for sensing/imaging of macro-viscosity in biological fluids of entire cells or organelles. To this end, we developed a hybrid sensor BDP-V BG by connecting a viscosity-sensitive boron-dipyrromethene (BODIPY) molecular rotor (BDP-V) to O6-benzylguanine (BG) for specific detection of local micro-viscosity of SNAP-tag fused proteins. We measured and calculated the reaction efficiency between the sensor and SNAP-tag protein in vitro to confirm the high labeling specificity. We also found that the labeling reaction results in a 53-fold fluorescence enhancement for the rotor, which qualifies it as a wash-free sensor with ignorable background fluorescence. The high sensitivity of protein labeled sensor (BDP-V-SNAP) to the changes of local viscosity was evaluated by detecting the enhancement of fluorescence lifetimes. Further, with the sensor BDP-V BG, we achieved high specific labeling of cells expressing two SNAP-tag fused proteins (nuclear histone H2B and mitochondrial COX8A). Two-photon excited fluorescence lifetime imaging revealed that, the micro-viscosities nearby the SNAP-tag fused two proteins are distinct. The different changes of local micro-viscosity of SNAP-tag fused histone protein in apoptosis induced by three nucleus-targeted drugs were also characterized for the first time.
Co-reporter:Ziqian Zhang, Jiayao Wu, Zhihao Shang, Chao Wang, Jiagao Cheng, Xuhong Qian, Yi Xiao, Zhiping Xu, and Youjun Yang
Analytical Chemistry 2016 Volume 88(Issue 14) pp:7274
Publication Date(Web):June 14, 2016
DOI:10.1021/acs.analchem.6b01603
NO donors are routinely used as the exogenous source in in vitro studies. However, the kinetics or the dose of NO release from the existing donors is not readily monitored. This complicates the elucidation of the involvement of NO in a biological response. We report herein a series of NO donors (NOD545a–g), whose NO release is triggered by UV light at 365 nm or a two-photon laser at 740 nm, and importantly, their NO release is accompanied by a drastic fluorescence turn-on, which has been harnessed to follow the kinetics and dose of NO release in a real-time fashion with spectroscopic methods or microscopic methods in in vitro studies. These merits have rendered NOD545a–g useful molecular tools in NO biology.
Co-reporter:Chao Wang, Xinbo Song, Zhuo Han, Xiaoyu Li, Yongping Xu, and Yi Xiao
ACS Chemical Biology 2016 Volume 11(Issue 7) pp:2033
Publication Date(Web):May 16, 2016
DOI:10.1021/acschembio.5b01032
By connection of O6-benzylguanine (BG) to an “o-phenylenediamine-locked” rhodamine spirolactam responsive to nitric oxide (NO), a novel substrate (TMR-NO-BG) of genetically encoded SNAP-tag has been constructed. In living cells, labeling SNAP-tag fused proteins with TMR-NO-BG will in situ generate corresponding probe–protein conjugates (TMR-NO-SNAP) that not only inherit high NO sensitivity from the small-molecule parent but also guarantee the site-specificity to the designated subcellular compartments such as the mitochondrial inner membrane, nucleus, and cytoplasm. In two representative cellular processes, TMR-NO-BG demonstrates its applicability to monitor endogenous subcellular NO in the activated RAW264.7 cells stimulated by lipopolysaccharide and in the apoptotic COS-7 cells induced by etoposide.
Co-reporter:Haibo Yu, Guli Li, Bei Zhang, Xinfu Zhang, Yi Xiao, Jieqiong Wang, Youtao Song
Dyes and Pigments 2016 Volume 133() pp:93-99
Publication Date(Web):October 2016
DOI:10.1016/j.dyepig.2016.05.028
•A neutral pH probe inspired by effect of hydrogen bond on pKa was developed.•The pKa of probe was 6.81 and higher than that of other rhodamine spirolactams known.•Probe displayed an excellent selectivity, organelle-targeting.•It would be a potential tool to assess pH fluctuation in mitochondria of live cells.A neutral pH fluorescent probe (Rh-Met) based on rhodamine spirolactam is firstly developed according to the modulation strategy of hydrogen bonds on pKa values. The pKa value of Rh-Met was 6.81 (±0.06) and higher than that of other rhodamine spirolactams known. Rh-Met showed a 240-fold enhancement of fluorescence intensity at 585 nm with attenuation of pH values from 9.7 to 3.5. In addition, Rh-Met displayed an excellent selectivity and reversible response to hydrogen ion. And it was successfully employed for imaging endocellular hydrogen ion in mitochondria and lipid droplets. These results suggested that Rh-Met could be a potential tool to assess pH fluctuation in mitochondria and lipid droplets, and would promote many new opportunities for studying the biological effect of pH in living cells.
Co-reporter:Yi Xiao, Fengyu Liu, Zhuo Chen, Weipin Zhu, Yufang Xu and Xuhong Qian
Chemical Communications 2015 vol. 51(Issue 30) pp:6480-6488
Publication Date(Web):05 Feb 2015
DOI:10.1039/C4CC09846C
A novel polycyclic aromatic molecule, i.e. 1-oxo-1H-phenalene-2,3-dicarbonitrile (compound 1, initially misidentified as 8-oxo-8H-acenaphtho[1,2-b]pyrrolecarbonitrile) was discovered by our group in 2005. This parent compound is highlighted for its unique oxidative SNArH (nucleophilic substitution of aromatic hydrogen) reactivity that provides easy approaches to diverse derivatives with different long-wavelength fluorescence and important biological activities. To date, a large number of derivatives have been synthesized and evaluated by several international research groups, indicating the formation of a new and valuable family of functional chemicals. Some members have been functionalized for molecular or nanoparticle-based probes applicable in chemical and environmental sensing, biomolecule imaging and tumor diagnosis. Others have qualified as high potency anticancer agents specifically targeting different functional proteins in tumor cells. With regard to the increasing attention paid to this new chemical family, it is a good time to review major achievements in order to promote further and deeper investigation.
Co-reporter:Xinfu Zhang, Benlei Wang, Chao Wang, Lingcheng Chen, and Yi Xiao
Analytical Chemistry 2015 Volume 87(Issue 16) pp:8292
Publication Date(Web):July 22, 2015
DOI:10.1021/acs.analchem.5b01428
Lipid peroxidation (LPO) in lysosomes is a valuable analyte because it is close associated with the evolutions of some major diseases. As a typical example, in the start-up phase of atherosclerosis, lysosomes get as swollen as foams, by accumulating a large amount of lipoproteins, which facilitates the free-radical chain propagation of LPO. Despite the existences of several fluorescent LPO probes, they are not appropriate for reporting the local extents of lysosomal LPO, for their unspecific intracellular localizations. Here, Foam-LPO, the first fluorescent LPO probe specifically targeting lysosomes, has been developed through straightforward synthesis using low-cost reagents. A basic tertiary amine group enables it to selectively localize in acidic lysosomes; and the conjugated diene moiety within the BODIPY fluorophore will degrade in response to lipid peroxidation, which results in fluorescence maximum shifting from 586 to 512 nm. Thus, under a confocal fluorescence microscope, Foam-LPO is able not only to visualize dynamic morphological changes of lysosomes during the evolution of foam cells, but also to relatively quantify local LPO extents in single lysosomes through ratiometric imaging. In addition, Foam-LPO proves applicable for two-color flow cytometry (FCM) analysis to make quantitative and high-throughput evaluation of LPO levels in large quantity of cells at different stages during the induction to form foam cells. Also importantly, with the aid of this new probe, the different roles played by low-density lipoprotein (LDL) and its oxidized form (ox-LDL) for the LPO processes of foam cells are distinguished and clarified, which benefits the understanding in the initiation and control factors of atherosclerosis.
Co-reporter:Bosung Kim;Xiling Yue;Binglin Sui;Xinfu Zhang;Mykhailo V. Bondar;Junko Sawada;Masanobu Komatsu;Kevin D. Belfield
European Journal of Organic Chemistry 2015 Volume 2015( Issue 25) pp:5563-5571
Publication Date(Web):
DOI:10.1002/ejoc.201500664
Abstract
Two new two-photon absorbing near-infrared (NIR) emitting 4,4-difluoro-4-bora-3a,4a-diaza-s-indacene (BODIPY) derivatives, DDC and SDC, were designed for one- and two-photon fluorescence microscopy imaging. Linear and nonlinear photophysical properties, including UV/Vis absorption, fluorescence, excitation anisotropy, photostability, and two-photon absorption cross sections, of the dyes were investigated to assess the potential of using the new probes as bioimaging agents. Cell viability and colocalization studies of DDC with Lysotracker Red, in COS 7 and HCT 116 cells demonstrated not only low toxicity but also selective targeting of lysosomes. SDC was encapsulated in silica-based nanoparticles for in vitro and ex vivo fluorescence bioimaging. The nanoparticles were modified with an RGD peptide to target αVβ3 integrin. The nanoprobe exhibited good biocompatibility and highly selective uptake in αVβ3 integrin-overexpressing cancers.
Co-reporter:Xinfu Zhang, Youdi Zhang, Lingcheng Chen and Yi Xiao
RSC Advances 2015 vol. 5(Issue 41) pp:32283-32289
Publication Date(Web):31 Mar 2015
DOI:10.1039/C5RA02414E
A series of tunable absorbing star-shaped BODIPY derivatives containing a different number of carbazole units were designed and synthesized. With the extended conjugated skeleton, their absorption spectra become progressively bathochromic shifted from the red region to the near-infrared region. The compound TAC with four carbazole units exhibits a strong near-infrared absorption up to 850 nm with a high extinction coefficient over 135000 M−1 cm−1 and considerable intrinsic hole mobility of 4.82 × 10−5 cm2 V−1 s−1 in SCLC devices. The near-infrared organic solar cells (OSCs) based on TAC exhibit a potential power conversion efficiency of 2.70% and a high open-circuit voltage of 0.85 V.
Co-reporter:Youdi Zhang, Yi Xiao, Yuanpeng Xie, Linlin Zhu, Dequan Shi, Chuanhui Cheng
Organic Electronics 2015 Volume 21() pp:184-191
Publication Date(Web):June 2015
DOI:10.1016/j.orgel.2015.03.017
•Perylene monoimides as non-fullerene acceptor for organic photovoltaics.•Higher efficiency of 2.30% and open-circuit voltage of 1.0 V.•Balanced electron–hole transport and smooth morphology.A fluorene-centered perylene monoimide dimer, PMI-F-PMI with a partly non-coplanar configuration has been developed as a potential non-fullerene acceptor for organic solar cells (OSCs). The optimum power conversion efficiency (PCE) of the OSC based on PMI-F-PMI as acceptor and poly (3-hexyl thiophene) (P3HT) as donor is up to 2.30% after annealing at 150 °C. The PCE of 2.30% is the highest value for the OSCs based on P3HT donor and non-fullerene acceptor lies in that PMI-F-PMI’s lowest unoccupied molecular orbital (LUMO) level around −3.50 eV matches well with the donor P3HT to produce higher open-circuit voltage (Voc) of 0.98 V. Meanwhile, PMI-F-PMI makes remarkable contribution to devices’ light absorption as the maximum EQE (30%) of the devices is at 512 nm, same to the maximum absorption wavelength of PMI-F-PMI. The other favorable characteristics of PMI-F-PMI in bulk heterojunction (BHJ) active layers is proved through the photo current density measures, the relatively balanced electron–hole transport, and the smooth morphology with root mean square (RMS) value of 1.86 nm. For these advantages, PMI-F-PMI overwhelms its sister PMI-F and parent PMI as an acceptor in BHJ solar cells.A novel non-fullerene acceptor, PMI-F-PMI, takes the advantages of a raised lowest unoccupied molecular orbital (LUMO) level and a distorted configuration, which does help to increase Voc, and Jsc in bulk heterojunction organic solar cells (OSCs). When P3HT as donor materials in OSCs (0.20 cm2), a high Voc of 0.98 V and a power conversion efficiency of 2.30% are obtained.
Co-reporter:Lingcheng Chen, Kaichen Zhang, Linlin Zhu, and Yi Xiao
Industrial & Engineering Chemistry Research 2015 Volume 54(Issue 50) pp:12699-12703
Publication Date(Web):December 6, 2015
DOI:10.1021/acs.iecr.5b04203
By a controllable and stepwise strategy, we have efficiently synthesized 3,4-perylenedicarboxylic monoanhydride (PDCMA), an important pigment and a versatile building block, in a gram-scale preparation. The mild reaction conditions, high yields, and simple postprocessing of the routes make it suitable for lab preparation and industrial production, which successfully achieves the challenge to avoid harsh reaction conditions, low yields, and difficult purification. Furthermore, using PDCMA and brominated PDCMA as the starting materials, we have also efficiently synthesized many perylene monoimide dyes in high yields.
Co-reporter:Xinbo Song, Chao Wang, Zhuo Han, Yongping Xu and Yi Xiao
RSC Advances 2015 vol. 5(Issue 30) pp:23646-23649
Publication Date(Web):26 Feb 2015
DOI:10.1039/C4RA17072E
We have developed a terminal alkyne substituted O6-benzylguanine, named PYBG, as a versatile precursor to be facilely conjugated with various fluorescent dyes through ‘Click chemistry’ and Sonogashira coupling reactions. These fluorescent PYBG derivatives specifically and efficiently label the target genetically encoded SNAP-tags in live cells.
Co-reporter:Lingcheng Chen, Kaichen Zhang, Changquan Tang, Qingdong Zheng, and Yi Xiao
The Journal of Organic Chemistry 2015 Volume 80(Issue 3) pp:1871-1877
Publication Date(Web):January 9, 2015
DOI:10.1021/jo5028529
By a controllable and stepwise strategy, a soluble ladder-conjugated perylene derivative BPI-FBI as the only product has been synthesized, which avoids the tough work to isolate regioisomers generated by a conventional one-step condensation method. BPI-FBI exhibits broad absorption spectra covering the whole visible region from 300 to 700 nm because of the large π-conjugation skeleton and has a low LUMO level inheriting the prototype PDI. In the steady-state space-charge-limited current (SCLC) devices, BPI-FBI exhibits an intrinsic electron mobility of 1.01 × 10–5 cm2 V–1 s–1. With a high two photon absorbing activity in the near-infrared region from 1200 to 1400 nm, BPI-FBI also exhibits good optical limiting performance, which will be useful for sensor or human eye protection and stabilization of light sources for optical communications.
Co-reporter:Xinfu Zhang, Chao Wang, Zhuo Han, and Yi Xiao
ACS Applied Materials & Interfaces 2014 Volume 6(Issue 23) pp:21669
Publication Date(Web):November 10, 2014
DOI:10.1021/am506750m
A new boron–dipyrromethene-based lysosome tracker, Lyso-NIR, is facilely synthesized. Besides the intensive near-infrared (NIR) fluorescence and high photostability, Lyso-NIR shows the capability to stably localize in lysosomes, which is independent of the local pH. Lyso-NIR does not have the problematic alkalization effect suffered by the commonly used lysotrackers; thus, it shows ignorable cytotoxicity and slightly affects normal physiological functions of lysosomes. The above advantages of Lyso-NIR make it feasible to track lysosomes’ dynamic changes in a relatively long time during the full cellular processes such as apoptosis, heavy metal stimulation, and endocytosis, as is demonstrated in this work. Moreover, Lyso-NIR’s narrow NIR emission at 740 nm with a full width at half-maximum smaller than 50 nm makes it easy to avoid the crosstalk with the emissions from other common fluorescent probes, which strengthens Lyso-NIR’s competitiveness as a standard lysosome tracker for multicolor bioimaging.Keywords: fluorescence imaging; lysosome; near-infrared; probe
Co-reporter:Xinfu Zhang, Chao Wang, Liji Jin, Zhuo Han, and Yi Xiao
ACS Applied Materials & Interfaces 2014 Volume 6(Issue 15) pp:12372
Publication Date(Web):July 21, 2014
DOI:10.1021/am503849c
Plasma membranes can sense the stimulations and transmit the signals from extracellular environment and then make further responses through changes in locations, shapes or morphologies. Common fluorescent membrane markers are not well suited for long time tracking due to their shorter retention time inside plasma membranes and/or their lower photostability. To this end, we develop a new bipolar marker, Mem-SQAC, which can stably insert into plasma membranes of different cells and exhibits a long retention time over 30 min. Mem-SQAC also inherits excellent photostability from the BODIPY dye family. Large two-photon absorption cross sections and long wavelength fluorescence emissions further enhance the competitiveness of Mem-SQAC as a membrane marker. By using Mem-SQAC, significant morphological changes of plasma membranes have been monitored during heavy metal poisoning and drug induced apoptosis of MCF-7 cells; the change tendencies are so distinctly different from each other that they can be used as indicators to distinguish different cell injuries. Further on, the complete processes of endocytosis toward Staphylococcus aureus and Escherichia coli by RAW 264.7 cells have been dynamically tracked. It is discovered that plasma membranes take quite different actions in response to the two bacteria, information unavailable in previous research reports.Keywords: fluorescence imaging; long wavelength; plasma membrane; probe; two-photon
Co-reporter:Kaichen Zhang, Yong Dai, Xinfu Zhang, Yi Xiao
Dyes and Pigments 2014 Volume 102() pp:1-5
Publication Date(Web):March 2014
DOI:10.1016/j.dyepig.2013.10.030
•Three novel ladder-conjugated chromophores were synthesized and characterized.•Linear optics, two-photon absorption and electrochemical properties illustrated their photophysical features.•Structure–function relationship is further discussed, suggesting a rational design to develop ladder-conjugated small molecules.Three novel ladder-conjugated chromophores indicated as LT1–LT3 were synthesized and characterized. Further studies on linear, nonlinear optics and electrochemical properties demonstrated their photophysical features respectively. Compound LT1 shows good two-photon absorption cross-section (δ) up to ∼1200 GM at 810 nm in tetrahydrofuran, which is attributed to intramolecular charge transfer effect, as supported by density functional theory theoretical calculations. Compound LT2 and LT3 show considerable molar extinction coefficients, which are more than 105, and higher quantum yields. Structure–function relationship is further discussed, suggesting a rational strategy to develop ladder-conjugated small molecules.Three novel ladder-conjugated chromophores LT1–LT3, using TABEF (2, 3, 6, 7-tetraamino-9, 9-bis (2-ethylhexyl) fluorene) as the key intermediate, were synthesized and characterized by NMR and MALDI-TOF mass spectrometry. They had similar structure and conjugated length. But interestingly they show different photophysical features caused by their electron density distribution, and it could be verified by DFT theoretical calculations. Structure–function relationship is further discussed, suggesting a rational strategy to develop ladder-conjugated small dyes.
Co-reporter:Zhiwei Ye, Yi Xiao, Haiying Guo and Chao Wang
RSC Advances 2014 vol. 4(Issue 71) pp:37547-37555
Publication Date(Web):31 Jul 2014
DOI:10.1039/C4RA04091K
Three-dimensional video imaging has emerged as an indispensable tool for real-time monitoring of dynamic acidic organelles. However, the limitation of video imaging is the absence of a specific stain for acidic organelle trackers. The aim of this work was to investigate the applicability of a potential acidic organelle tracker, Lyso-R, in three-dimensional video imaging in live cells. In a close examination of three differently designed rhodamine dyes, Lyso-R outperformed the other two with a suitable pKa value and higher membrane permeability. The uninterrupted fluorescence of Lyso-R towards macromolecules, e.g. lecithin and proteins, led to higher specificity and signal-to-background ratio than LysoTracker DND 189 and DND 99 for imaging acidic organelles. In addition, Lyso-R was photostable, and MTT assays confirmed its low toxicity towards cells. Inspired by these facts, three-dimensional tracking of a single acidic organelle in a live cell was obtained by staining with Lyso-R under confocal microscopy. The measurement of this organelle demonstrated that the distance change of the organelle centroid on XY plane was sharper than its depth change. The usage of Lyso-R was further extended with two-dimensional video imaging of acidic organelles during various cell metabolisms. All of these results demonstrate the potential applicability of Lyso-R as a three-dimensional imaging tracker of acidic organelles.
Co-reporter:Yong Dai, Bao-Kuo Lv, Xin-Fu Zhang, Yi Xiao
Chinese Chemical Letters 2014 Volume 25(Issue 7) pp:1001-1005
Publication Date(Web):July 2014
DOI:10.1016/j.cclet.2014.05.020
PAHPN, a naphthalimide-based mitotracker with reasonable two-photon excitation emission activity and polarity-sensitive fluorescence properties has been efficiently synthesized and studied in two-photon, co-localization, and FLIM imaging.PAHPN is a new mitochondria targeted probe for in two-photon imaging.
Co-reporter:Youdi Zhang;Dr. Lingcheng Chen;Kaichen Zhang;Helin Wang ; Yi Xiao
Chemistry - A European Journal 2014 Volume 20( Issue 32) pp:10170-10178
Publication Date(Web):
DOI:10.1002/chem.201402100
Abstract
A new ladder-conjugated star-shaped oligomer electron-transporting material TetraPDI-PF, with four perylene diimide (PDI) branches and a fluorene core, was efficiently synthesized. The oligomer is highly soluble in dichlorobenzene with a solubility of 155 mg mL−1, which is higher than those of PDI (35 mg mL−1) and PDI-Phen (70 mg mL−1). Demonstrated by thermogravimetric analysis (TGA), the oligomer exhibits excellent thermal stability with the decomposition temperature (Td) of 291.2 °C, which is 65 °C higher than that of PDI. Cyclic voltammetry (CV) and differential pulse voltammetry (DPV) were employed to investigate the electrochemical properties. Although the CV curves of TetraPDI-PF are successively scanned for 15 cycles, they still remain invariable reduction potentials. The oligomer also shows outstanding photostability, even better than PDI, which maintains 99 % fluorescence intensity after irradiation for 10 min using maximum laser intensity. In the steady-state space-charge-limited current (SCLC) devices, TetraPDI-PF exhibits higher intrinsic electron mobility of 2.22×10−5 cm2 V−1 s−1, three orders of magnitude over that of PDI (3.52×10−8 cm2 V−1 s−1). The bulk heterojunction (BHJ) organic solar cells (OSCs) using TetraPDI-PF as non-fullerene acceptors and P3HT as donors give optimum power conversion efficiency (PCE) of 0.64 %, which is 64 times that of the PDI:P3HT BHJ cells.
Co-reporter:Xinfu Zhang, Yi Xiao, Ling He, and Yuhui Zhang
The Journal of Organic Chemistry 2014 Volume 79(Issue 13) pp:6315-6320
Publication Date(Web):June 12, 2014
DOI:10.1021/jo500653r
Through-bond energy transfer (TBET) has been proposed as a versatile strategy to develop encoded microspheres. Together with the donor molecule, two TBET cassettes with high intramolecular TBET efficiencies (98% and 99%) and pseudo-Stokes shifts about 70 and 160 nm have been codoped into PS microspheres. Upon exclusive excitation at 480 nm, these microspheres emit simultaneously triple peaks at 512, 570, and 656 nm. Further confocal imaging and flow cytometric analysis demonstrates satisfactory performances of the new encoded microspheres.
Co-reporter:Lu Wang ; Yi Xiao ; Wenming Tian ;Liezheng Deng
Journal of the American Chemical Society 2013 Volume 135(Issue 8) pp:2903-2906
Publication Date(Web):February 14, 2013
DOI:10.1021/ja311688g
We have developed Lyso-V, the first fluorescent probe of lysosomal viscosity. Because of its lysosome-actived fluorescence characteristics, Lyso-V has proved to be an ideal lysosomal tracer with high spatial and temporal resolution under laser confocal microscopy. More importantly, Lyso-V shows its practical applicability in real-time quantification of lysosomal viscosity changes in live cells through fluorescence lifetime imaging microscopy.
Co-reporter:Youdi Zhang, Helin Wang, Yi Xiao, Ligang Wang, Dequan Shi, and Chuanhui Cheng
ACS Applied Materials & Interfaces 2013 Volume 5(Issue 21) pp:11093
Publication Date(Web):October 15, 2013
DOI:10.1021/am4033185
In this work, we propose the application of liquid crystalline acceptors as a potential means to improve the performances of bulk heterojunction (BHJ) organic solar cells. LC-1, a structurally-simple perylene diimide (PDI), has been adopted as a model for thorough investigation. It exhibits a broad temperature range of liquid crystalline (LC) phase from 41 °C to 158 °C, and its LC properties have been characterized by differental scanning calorimetry (DSC), polarization optical microscopy (POM), and X-ray diffraction (XRD). The BHJ devices, using P3HT:LC-1 (1:2) as an organic photovoltaic active layer undergoing thermal annealing at 120 °C, shows an optimized efficiency of 0.94 %. By contrast, the devices based on PDI-1, a nonliquid crystalline PDI counterpart, only obtain a much lower efficiency of 0.22%. Atomic force microscopy (AFM) images confirm that the active layers composed of P3HT:LC-1 have smooth and ordered morphology. In space charge limited current (SCLC) devices fabricated via a spin-coating technique, LC-1 shows the intrinsic electron mobility of 2.85 × 10–4 cm2/(V s) (at 0.3 MV/cm) which is almost 5 times that of PDI-1 (5.83 × 10–5 cm2/(V s)) under the same conditions for thermal annealing at 120 °C.Keywords: bulk heterojunction solar cells; liquid crystalline; n-type semiconductor; perylene diimides; space charge limited current;
Co-reporter:Haibo Yu, Xinfu Zhang, Yi Xiao, Wei Zou, Liping Wang, and Liji Jin
Analytical Chemistry 2013 Volume 85(Issue 15) pp:7076
Publication Date(Web):July 5, 2013
DOI:10.1021/ac401916z
Nitric oxide (NO) is a ubiquitous cellular messenger molecule in the cardiovascular, nervous, and immune systems. Mitochondrion is the main area where endogenous NO is synthesized by inducible NOS enzymes in mammalian cells. Thus, real-time monitoring NO in mitochondria is very meaningful for NO chemical biology. Although a variety of fluorescent probes for NO have been successfully developed, they are not suited for detecting mitochondrial NO because none of them can specifically localize in mitochondria. Herein, Mito-Rh-NO, the first mitochondria-targetable “turn-on” fluorescent probe for NO, has been developed through attaching a triphenylphosphonium to a rhodamine spirolactam. The characteristics of this probe are as following: (1) Mito-Rh-NO exhibits high sensitivity toward NO. In solution, Mito-Rh-NO responds to NO by significant fluorescence enhancement up to 60-fold, and its NO detection limit is as low as 4.0 nM. (2) The NO sensing of Mito-Rh-NO is highly selective, which will not interfere with the other reactive oxygen and nitrogen species. (3) Mito-Rh-NO has a low cytotoxic effect: after being treated with 10 μM Mito-Rh-NO for 24 h, the survival rate is higher than 90%. (4) Mito-Rh-NO specifically localizing in mitochondria: colocalization experiment of Mito-Rh-NO and Rh 123, a typical mitotracker, shows the merged fluorescent microcopy image with a high Pearson’s colocalization coefficient 0.92 and overlap coefficient 0.99. (5) Mito-Rh-NO demonstrates high applicability for real-time monitoring of mitochondrial NO in live cells. Both the exogenous NO released by the donor NOC13 and endogenous NO generated in cells under stimulation have been visualized under confocal microscopy.
Co-reporter:Zhenbo Zhao, Yi Xiao, Youdi Zhang and Helin Wang
RSC Advances 2013 vol. 3(Issue 44) pp:21373-21376
Publication Date(Web):17 Sep 2013
DOI:10.1039/C3RA44553D
Novel n-type star-shaped molecule TriPBI containing a HAT core and three fused PBI “arms” was synthesized and characterized. The n-type charge carrier mobility as high as 3.34 × 10−3 cm2 V−1 s−1 of TriPBI is evaluated by SCLC measurements, which is considerably higher than 8.71 × 10−5 cm2 V−1 s−1 of the PBI monomer.
Co-reporter:Haibo Yu, Liji Jin, Yong Dai, Huaqiang Li and Yi Xiao
New Journal of Chemistry 2013 vol. 37(Issue 6) pp:1688-1691
Publication Date(Web):16 Jan 2013
DOI:10.1039/C3NJ41127C
Based on a FRET scaffold bearing BODIPY and TMR fluorophores, a ratiometric fluorescent probe BRP-NO highly sensitive and selective to nitric oxide was developed and employed for imaging intracellular nitric oxide released from NOC13.
Co-reporter:Lu Wang, Yuhui Zhang and Yi Xiao
RSC Advances 2013 vol. 3(Issue 7) pp:2203-2206
Publication Date(Web):18 Dec 2012
DOI:10.1039/C2RA21920D
A series of meso-alkoxy BODIPYs have been efficiently developed via an unusual approach. These novel derivatives exhibit strong fluorescence in both liquid and solid states because of the good balance between larger Stokes shifts and higher fluorescence quantum yields.
Co-reporter:Kai Xiong, Yi Xiao
Tetrahedron Letters 2013 Volume 54(Issue 24) pp:3171-3175
Publication Date(Web):12 June 2013
DOI:10.1016/j.tetlet.2013.04.030
To improve the solubility of naphthalene bisanhydride (NTCA), four alkyl groups are incorporated to the naphthalene core via a five-step procedure. The new naphthalene bisanhydride derivative (TO-NTCA) shows much higher reactivity than the parent NTCA in the model condensations with ortho-diaminobenzene and 2-ethylhexylamine and gives corresponding soluble molecules with excellent yields. Hence, TO-NTCA is a potential monomer for condensations.
Co-reporter:Xinfu Zhang, Yi Xiao, Jing Qi, Junle Qu, Bosung Kim, Xiling Yue, and Kevin D. Belfield
The Journal of Organic Chemistry 2013 Volume 78(Issue 18) pp:9153-9160
Publication Date(Web):August 28, 2013
DOI:10.1021/jo401379g
Near-infrared (NIR) fluorescent probes are increasingly popular in biological imaging and sensing, as long-wavelength (650–900 nm) excitation and emission have the advantages of minimum photodamage, deep tissue penetration, and minimum interference from autofluorescence in living systems. Here, a series of long-wavelength BODIPY dyes SPC, DC-SPC, DPC, and DC-DPC are synthesized conveniently and efficiently. They exhibit excellent photophysical properties in far red to near-infrared region, including large extinction coefficients, high fluorescence quantum yields, good photostability, and reasonable two-photon absorption cross section. Comparison of single-molecular imaging confirms that DPC is a much more efficient and more photostable NIR fluorophore than the commonly used Cy5. Also importantly, two kinds of convenient functionalization sites have been reserved: the aryl iodide for organometallic couplings and the terminal alkyne groups for click reactions. Further derivatives DC-SPC-PPh3 exhibit specificity to localize in mitochondria. The introduction of triphenylphosphonium (TPP) moieties mediates its hydrophilic–lipophilic balance and makes DC-SPC-PPh3 appropriate for cell labeling. Their long-wavelength emission at ∼650 nm can efficiently avoid the spectral crosstalk with other probes emitting in the visible light region. Superior photostability, low cytotoxicity, and two-photon excitable properties demonstrate its utility as a standard colocalizing agent to estimate the other probes’ local distribution.
Co-reporter:Zhenbo Zhao, Youdi Zhang, and Yi Xiao
The Journal of Organic Chemistry 2013 Volume 78(Issue 11) pp:5544-5549
Publication Date(Web):May 7, 2013
DOI:10.1021/jo400619u
Multifunctional building blocks 8 and 9 were efficiently synthesized by fusing a perylene-3,4,9,10-tetracarboxylic acid bisimide (PBI) core with o-phenylenediamine, and they were condensed with a pyrenedione and a pyrenetetraone, respectively, to construct new ladder-type conjugated oligomers 12 and 13. In the key photocyclization step, an unusual regioselectivity at the position ortho to the nitro group was discovered in the coupling of the o-nitroaniline functional units at the bay sites of PBI. Bulk-heterojunction solar cells based on 12 and 13 as the acceptors exhibited reasonable performance.
Co-reporter:Haibo Yu ; Yi Xiao ;Liji Jin
Journal of the American Chemical Society 2012 Volume 134(Issue 42) pp:17486-17489
Publication Date(Web):October 8, 2012
DOI:10.1021/ja308967u
A lysosome-specific and two-photon fluorescent probe, Lyso-NINO, demonstrates high selectivity and sensitivity toward NO, lower cytotoxicity, and perfect lysosomal localization. With the aid of Lyso-NINO, the first capture of NO within lysosomes of macrophage cells has been achieved using both two-photon fluorescence microscopy and flow cytometry.
Co-reporter:Yuanpeng Xie, Xinfu Zhang, Yi Xiao, Youdi Zhang, Fan Zhou, Jing Qi and Junle Qu
Chemical Communications 2012 vol. 48(Issue 36) pp:4338-4340
Publication Date(Web):08 Mar 2012
DOI:10.1039/C2CC31261A
A novel star-shaped chromophore, Tr–PBI, was constructed by fusing three perylenebisimide branches and a truxene core. Tr–PBI exhibits high photostability and excellent two-photon properties: the maximum of δTPA is 11000 GM at 990 nm and fluorescence quantum efficiency Φ is 0.40 in THF.
Co-reporter:Haibo Yu, Yi Xiao, and Haiying Guo
Organic Letters 2012 Volume 14(Issue 8) pp:2014-2017
Publication Date(Web):April 3, 2012
DOI:10.1021/ol300523m
Inspired by the ring-open reaction of rhodamine spriolactams as typical chemodosimeters, a general strategy is proposed to conveniently and efficiently synthesize isomerically pure 5- and 6-R-tetramethylrhodamine on a larger scale.
Co-reporter:Youdi Zhang, Zhenbo Zhao, Xiaomei Huang, Yuanpeng Xie, Chenxi Liu, Jun Li, Xin Guan, Kaichen Zhang, Chuanhui Cheng and Yi Xiao
RSC Advances 2012 vol. 2(Issue 33) pp:12644-12647
Publication Date(Web):16 Oct 2012
DOI:10.1039/C2RA22488G
Novel bisazacoronene bisimides (bisaza CBIs) were efficiently synthesized via a new type of photocyclization involving a Schiff base. One of the bisaza CBIs self-assembles into nanobelts and shows reasonable electron mobility in a space-charge-limited current device.
Co-reporter: Inmaculada García-Moreno;Lu Wang; Angel Costela;Dr. Jorge Bañuelos; Iñigo López Arbeloa; Yi Xiao
ChemPhysChem 2012 Volume 13( Issue 17) pp:3923-3931
Publication Date(Web):
DOI:10.1002/cphc.201200587
Abstract
Herein, we present the synthetic route and the photophysical, electrochemical as well as laser properties of novel red-emitting boron-dipyrromethenes (BODIPYs) bearing arylethyne moieties. Such functionality is added along the main axis of the chromophore leading to single- and double-substituted derivatives. The relationship between the dye structure and the lasing properties is studied in detail with the help of the photophysical and electrochemical properties as well as quantum mechanical simulations. The asymmetric substitution of the parent dye induces inhomogeneities in the charge distribution, which leads to an overall loss of the fluorescence capacity, mainly in polar media. Such non-radiative deactivation processes can be softened by decreasing the electron-donor ability of the substituent or even avoided by symmetrical substitution. Thus, grafting of the arylethyne moieties at the longitudinal axis of the indacene core results in an effective strategy to develop red-edge BODIPYs with highly efficient and photostable laser emission.
Co-reporter:Xinfu Zhang, Haibo Yu, and Yi Xiao
The Journal of Organic Chemistry 2012 Volume 77(Issue 1) pp:669-673
Publication Date(Web):November 23, 2011
DOI:10.1021/jo201413b
In the orignial 1,3,5,7-tetraphenyl aza-BODIPY, replacing the phenyl rings with thiophene achieved significant bathochromic shifts. One of the target molecules, DPDTAB, emitting strong NIR fluorescence with a quantum yield of 0.46 in acetonitrile, is a very competitive NIR fluorophore.
Co-reporter:Yi Xiao, Dakui Zhang, Xuhong Qian, Angel Costela, Inmaculada Garcia-Moreno, Virginia Martin, M. Eugenia Perez-Ojeda, Jorge Bañuelos, Leire Gartzia and Iñigo López Arbeloa
Chemical Communications 2011 vol. 47(Issue 41) pp:11513-11515
Publication Date(Web):20 Sep 2011
DOI:10.1039/C1CC13874J
A cassette molecule, featuring direct integration of two donor BODIPY units to one acceptor BODIPY unit, was conveniently developed as the first highly “through-bond energy transfer” (TBET) laser dye. This multicolor absorbing dye exhibited highly efficient and photostable laser action under drastic pumping conditions.
Co-reporter:Yang Yang, Yaochuan Wang, Yuanpeng Xie, Tao Xiong, Zhongyi Yuan, Youdi Zhang, Shixiong Qian and Yi Xiao
Chemical Communications 2011 vol. 47(Issue 38) pp:10749-10751
Publication Date(Web):25 Aug 2011
DOI:10.1039/C1CC14071J
A series of ladder chromophores featuring planar structures of fused perylenebisimide and carbazole have been efficiently synthesized via photocyclization under sun light. Compared to N,N′-bis(3-pentyl) perylenebisimide (PBI-1), they show remarkably enhanced nonlinear properties.
Co-reporter:Dakui Zhang, Virginia Martín, Inmaculada García-Moreno, Angel Costela, M. Eugenia Pérez-Ojeda and Yi Xiao
Physical Chemistry Chemical Physics 2011 vol. 13(Issue 28) pp:13026-13033
Publication Date(Web):21 Jun 2011
DOI:10.1039/C1CP21038F
By comparison and combination of two strategies, extending π-conjugation and tuning Intramolecular Charge Transfer (ICT) effect, new long-wavelength BODIPY dyes have been efficiently synthesized. The new chromophores exhibit good optical properties: high fluorescence quantum yields, exceptionally large molar extinction coefficients, narrow red-emission bands, and relatively large Stokes shifts etc., in polar or apolar solvents. Besides, the new dyes, under transversal pumping at 532 nm, exhibit highly efficient and stable laser emission tunable from the green to NIR spectral region (570–725 nm). Moreover, one of these new BODIPY derivatives shows cell membrane permeability and bright intracellular red fluorescence. These advantageous characteristics assure the potential of these dyes for biophotonic applications.
Co-reporter:Haibo Yu;Dr. Yi Xiao;Haiying Guo;Dr. Xuhong Qian
Chemistry - A European Journal 2011 Volume 17( Issue 11) pp:3179-3191
Publication Date(Web):
DOI:10.1002/chem.201002498
Abstract
We have connected a borondipyrromethene (BODIPY) donor to the 5′ position of a tetramethylrhodamine (TMR) acceptor to form a high efficiency (over 99 %) intramolecular fluorescence resonance energy transfer (FRET) cassette, BODIPY–rhodamine platform (BRP). While the good spectral overlap between the emission of BODIPY and the absorption of TMR was one favorable factor, another feature of this FRET system was the rigid and short biphenyl spacer that favored efficient through-bond energy transfer. More importantly, in this system, the 2′-carboxyl group of the rhodamine unit was preserved for the further modifications, which was as convenient as those carbonyl groups on the original rhodamines without connection to donors. For this reason, BRP is clearly differentiated from the previous ratiometric sensors based on donor rhodamine systems. To illustrate its value as a versatile platform, we introduced typical Hg2+ receptors into BRP, through convenient one-pot reactions on the 2′-carboxyl group, and successfully developed two ratiometric sensors, BRP-1 and BRP-2, with different spirocyclic receptors that recognized Hg2+ on different reaction mechanisms. Upon excitation at a single wavelength (488 nm), at which only BODIPY absorbed, both of the FRET sensors exhibited clear Hg2+-induced changes in the intensity ratio of the two strong emission bands of BODIPY and rhodamine. It should be noted that these ratiometric Hg2+ sensors exhibited excellent sensitivity and selectivity Hg2+, as well as pH insensitivity, which was similar to the corresponding ‘turn-on’ rhodamine sensors. While both ratiometric probes were applicable for Hg2+ imaging in living cells, BRP-1 exhibited higher sensitivity and faster responses than BRP-2. Our investigation indicated that on a versatile platform, such as BRP, a large number of highly efficient ratiometric sensors for transition-metal ions could be conveniently developed.
Co-reporter:Yi Xiao, Fengyu Liu, Zhuo Chen, Weipin Zhu, Yufang Xu and Xuhong Qian
Chemical Communications 2015 - vol. 51(Issue 30) pp:NaN6488-6488
Publication Date(Web):2015/02/05
DOI:10.1039/C4CC09846C
A novel polycyclic aromatic molecule, i.e. 1-oxo-1H-phenalene-2,3-dicarbonitrile (compound 1, initially misidentified as 8-oxo-8H-acenaphtho[1,2-b]pyrrolecarbonitrile) was discovered by our group in 2005. This parent compound is highlighted for its unique oxidative SNArH (nucleophilic substitution of aromatic hydrogen) reactivity that provides easy approaches to diverse derivatives with different long-wavelength fluorescence and important biological activities. To date, a large number of derivatives have been synthesized and evaluated by several international research groups, indicating the formation of a new and valuable family of functional chemicals. Some members have been functionalized for molecular or nanoparticle-based probes applicable in chemical and environmental sensing, biomolecule imaging and tumor diagnosis. Others have qualified as high potency anticancer agents specifically targeting different functional proteins in tumor cells. With regard to the increasing attention paid to this new chemical family, it is a good time to review major achievements in order to promote further and deeper investigation.
Co-reporter:Yuanpeng Xie, Xinfu Zhang, Yi Xiao, Youdi Zhang, Fan Zhou, Jing Qi and Junle Qu
Chemical Communications 2012 - vol. 48(Issue 36) pp:NaN4340-4340
Publication Date(Web):2012/03/08
DOI:10.1039/C2CC31261A
A novel star-shaped chromophore, Tr–PBI, was constructed by fusing three perylenebisimide branches and a truxene core. Tr–PBI exhibits high photostability and excellent two-photon properties: the maximum of δTPA is 11000 GM at 990 nm and fluorescence quantum efficiency Φ is 0.40 in THF.
Co-reporter:Yang Yang, Yaochuan Wang, Yuanpeng Xie, Tao Xiong, Zhongyi Yuan, Youdi Zhang, Shixiong Qian and Yi Xiao
Chemical Communications 2011 - vol. 47(Issue 38) pp:NaN10751-10751
Publication Date(Web):2011/08/25
DOI:10.1039/C1CC14071J
A series of ladder chromophores featuring planar structures of fused perylenebisimide and carbazole have been efficiently synthesized via photocyclization under sun light. Compared to N,N′-bis(3-pentyl) perylenebisimide (PBI-1), they show remarkably enhanced nonlinear properties.
Co-reporter:Yi Xiao, Dakui Zhang, Xuhong Qian, Angel Costela, Inmaculada Garcia-Moreno, Virginia Martin, M. Eugenia Perez-Ojeda, Jorge Bañuelos, Leire Gartzia and Iñigo López Arbeloa
Chemical Communications 2011 - vol. 47(Issue 41) pp:NaN11515-11515
Publication Date(Web):2011/09/20
DOI:10.1039/C1CC13874J
A cassette molecule, featuring direct integration of two donor BODIPY units to one acceptor BODIPY unit, was conveniently developed as the first highly “through-bond energy transfer” (TBET) laser dye. This multicolor absorbing dye exhibited highly efficient and photostable laser action under drastic pumping conditions.
Co-reporter:Dakui Zhang, Virginia Martín, Inmaculada García-Moreno, Angel Costela, M. Eugenia Pérez-Ojeda and Yi Xiao
Physical Chemistry Chemical Physics 2011 - vol. 13(Issue 28) pp:NaN13033-13033
Publication Date(Web):2011/06/21
DOI:10.1039/C1CP21038F
By comparison and combination of two strategies, extending π-conjugation and tuning Intramolecular Charge Transfer (ICT) effect, new long-wavelength BODIPY dyes have been efficiently synthesized. The new chromophores exhibit good optical properties: high fluorescence quantum yields, exceptionally large molar extinction coefficients, narrow red-emission bands, and relatively large Stokes shifts etc., in polar or apolar solvents. Besides, the new dyes, under transversal pumping at 532 nm, exhibit highly efficient and stable laser emission tunable from the green to NIR spectral region (570–725 nm). Moreover, one of these new BODIPY derivatives shows cell membrane permeability and bright intracellular red fluorescence. These advantageous characteristics assure the potential of these dyes for biophotonic applications.
Co-reporter:Xinbo Song, Ning Li, Chao Wang and Yi Xiao
Journal of Materials Chemistry A 2017 - vol. 5(Issue 2) pp:NaN368-368
Publication Date(Web):2016/11/29
DOI:10.1039/C6TB02524B
It is meaningful to accurately quantify the changes in local viscosity within the mitochondria of living cells, because viscosity influences mitochondrial network organization and metabolite diffusion. Although many molecular probes targeting mitochondria have been reported, almost all of them are not fixed to the mitochondria. Thus, they may not be suitable for sensing in abnormal mitochondria with lowered potential. In order to monitor viscosity in all mitochondria, no matter their working or health status, we develop the first fixable BODIPY (boron-dipyrromethene) rotor, named Vis-A. Vis-A contains an aldehyde group as an anchor to react with amino groups of proteins, which make it immobilizable in mitochondria. Vis-B, the reference compound without such anchor unit, is also synthesized. Both Vis-A and Vis-Bshow excellent mitochondrial targetability, as good as the commercially available mitochondrial dye (Mito Tracker Deep Red). However, when cells are chemically treated to decrease the mitochondrial potential, only Vis-A continues emitting strong fluorescence in mitochondria, but the signals of Vis-B and Mito Tracker Deep Red completely disappear. This comparison confirms that Vis-A not only specifically localizes in mitochondria, but also can be stably retained there. Then, Vis-A is applied to detect the mitochondrial viscosity of living cells by Fluorescence Lifetime Imaging (FLIM). Especially, with the aid of Vis-A, the changes in viscosity under typical pathological conditions (i.e., treatment with rotenone and carbonylcyanide-m-chlorophenylhydrazone (CCCP)) for mitochondria are monitored by FLIM.