Co-reporter:Marie E. Yurkovich;Robert Jenkins;Yuhui Sun;Peter F. Leadlay
Chemical Communications 2017 vol. 53(Issue 13) pp:2182-2185
Publication Date(Web):2017/02/09
DOI:10.1039/C6CC09934C
Following the in vivo investigation of thiotetronate assembly in Lentzea sp. and in S. thiolactonus NRRL 15439 (Havemann et al., Chem. Commun., 2017, DOI: 10.1039/c6cc09933e), the minimal set of genes required for thiolactomycin production was determined through heterologous expression and the mechanism for polyketide assembly was established in vitro through incubation of recombinant TlmB with its substrates in the presence of either nonhydrolysable or hydrolysable chemical probes. The results presented here constitute unequivocal evidence of enzymatic processing by an unusual iterative polyketide synthase.
Co-reporter:Judith Havemann;Marie E. Yurkovich;Robert Jenkins;Sophia Harringer;Weixin Tao;Shishi Wen;Yuhui Sun;Peter F. Leadlay
Chemical Communications 2017 vol. 53(Issue 11) pp:1912-1915
Publication Date(Web):2017/02/02
DOI:10.1039/C6CC09933E
Chemical ‘chain termination’ probes were utilised for the investigation of thiotetronate antibiotic biosynthesis in the filamentous bacteria Lentzea sp. and Streptomyces thiolactonus NRRL 15439. The use of these tools led to the capture of biosynthetic intermediates involved in the thiotetronate polyketide backbone assembly, providing first insights into substrate specificity and in vivo intermediate processing by unusual iterative synthases.
Co-reporter:Y. T. Candace Ho;Daniel J. Leng;Francesca Ghiringhelli;Ina Wilkening;Dexter P. Bushell;Otto Köstner;Elena Riva;Judith Havemann;Daniele Passarella
Chemical Communications 2017 vol. 53(Issue 52) pp:7088-7091
Publication Date(Web):2017/06/27
DOI:10.1039/C7CC02427D
Chemical probes were devised and evaluated for the capture of biosynthetic intermediates involved in the bio-assembly of the nonribosomal peptide echinomycin. Putative intermediate peptide species were isolated and characterised, providing fresh insights into pathway substrate flexibility and paving the way for novel chemoenzymatic approaches towards unnatural peptides.
Co-reporter:Y. T. Candace Ho;Daniel J. Leng;Francesca Ghiringhelli;Ina Wilkening;Dexter P. Bushell;Otto Kostner;Elena Riva;Judith Havemann;Daniele Passarella
Chemical Communications 2017 vol. 53(Issue 92) pp:12481-12481
Publication Date(Web):2017/11/16
DOI:10.1039/C7CC90432K
Correction for ‘Novel chemical probes for the investigation of nonribosomal peptide assembly’ by Y. T. Candace Ho et al., Chem. Commun., 2017, 53, 7088–7091.
Co-reporter:Ina Wilkening, Silvia Gazzola, Elena Riva, James S. Parascandolo, Lijiang Song and Manuela Tosin
Chemical Communications 2016 vol. 52(Issue 68) pp:10392-10395
Publication Date(Web):02 Aug 2016
DOI:10.1039/C6CC04681A
Malonyl carba(dethia) N-decanoyl cysteamine methyl esters and novel acetoxymethyl esters were utilised as second-generation probes for polyketide intermediate capture. The use of these tools in vivo led to the characterisation of an almost complete set of biosynthetic intermediates from a modular assembly line, providing a first kinetic overview of intermediate processing leading to complex natural product formation.
Co-reporter:James S. Parascolo;Dr. Judith Havemann;Helen K. Potter;Dr. Fanglu Huang;Dr. Elena Riva;Jack Connolly;Dr. Ina Wilkening;Dr. Lijiang Song; Peter F. Leadlay;Dr. Manuela Tosin
Angewandte Chemie International Edition 2016 Volume 55( Issue 10) pp:3463-3467
Publication Date(Web):
DOI:10.1002/anie.201509038
Abstract
Chemical probes capable of reacting with KS (ketosynthase)-bound biosynthetic intermediates were utilized for the investigation of the model type I iterative polyketide synthase 6-methylsalicylic acid synthase (6-MSAS) in vivo and in vitro. From the fermentation of fungal and bacterial 6-MSAS hosts in the presence of chain termination probes, a full range of biosynthetic intermediates was isolated and characterized for the first time. Meanwhile, in vitro studies of recombinant 6-MSA synthases with both nonhydrolyzable and hydrolyzable substrate mimics have provided additional insights into substrate recognition, providing the basis for further exploration of the enzyme catalytic activities.
Co-reporter:James S. Parascolo;Dr. Judith Havemann;Helen K. Potter;Dr. Fanglu Huang;Dr. Elena Riva;Jack Connolly;Dr. Ina Wilkening;Dr. Lijiang Song; Peter F. Leadlay;Dr. Manuela Tosin
Angewandte Chemie 2016 Volume 128( Issue 10) pp:3524-3528
Publication Date(Web):
DOI:10.1002/ange.201509038
Abstract
Chemical probes capable of reacting with KS (ketosynthase)-bound biosynthetic intermediates were utilized for the investigation of the model type I iterative polyketide synthase 6-methylsalicylic acid synthase (6-MSAS) in vivo and in vitro. From the fermentation of fungal and bacterial 6-MSAS hosts in the presence of chain termination probes, a full range of biosynthetic intermediates was isolated and characterized for the first time. Meanwhile, in vitro studies of recombinant 6-MSA synthases with both nonhydrolyzable and hydrolyzable substrate mimics have provided additional insights into substrate recognition, providing the basis for further exploration of the enzyme catalytic activities.
Co-reporter:Hirokazu Kage, Elena Riva, James S. Parascandolo, Martin F. Kreutzer, Manuela Tosin and Markus Nett
Organic & Biomolecular Chemistry 2015 vol. 13(Issue 47) pp:11414-11417
Publication Date(Web):28 Oct 2015
DOI:10.1039/C5OB02009C
Synthetic chain terminators were used to capture the biosynthetic intermediates from a partially reducing iterative type I polyketide synthase, which is integrated into a multimodular biosynthesis enzyme. The off-loaded metabolites clarified the timing of ketoreduction and aromatization in the assembly of the antibiotic micacocidin.
Co-reporter:Dr. Elena Riva;Dr. Ina Wilkening;Silvia Gazzola;W. M. Ariel Li;Dr. Luke Smith; Peter F. Leadlay;Dr. Manuela Tosin
Angewandte Chemie 2014 Volume 126( Issue 44) pp:12138-12143
Publication Date(Web):
DOI:10.1002/ange.201407448
Abstract
A library of functionalized chemical probes capable of reacting with ketosynthase-bound biosynthetic intermediates was prepared and utilized to explore in vivo polyketide diversification. Fermentation of ACP mutants of S. lasaliensis in the presence of the probes generated a range of unnatural polyketide derivatives, including novel putative lasalocid A derivatives characterized by variable aryl ketone moieties and linear polyketide chains (bearing alkyne/azide handles and fluorine) flanking the polyether scaffold. By providing direct information on microorganism tolerance and enzyme processing of unnatural malonyl-ACP analogues, as well as on the amenability of unnatural polyketides to further structural modifications, the chemical probes constitute invaluable tools for the development of novel mutasynthesis and synthetic biology.
Co-reporter:Dr. Elena Riva;Dr. Ina Wilkening;Silvia Gazzola;W. M. Ariel Li;Dr. Luke Smith; Peter F. Leadlay;Dr. Manuela Tosin
Angewandte Chemie International Edition 2014 Volume 53( Issue 44) pp:11944-11949
Publication Date(Web):
DOI:10.1002/anie.201407448
Abstract
A library of functionalized chemical probes capable of reacting with ketosynthase-bound biosynthetic intermediates was prepared and utilized to explore in vivo polyketide diversification. Fermentation of ACP mutants of S. lasaliensis in the presence of the probes generated a range of unnatural polyketide derivatives, including novel putative lasalocid A derivatives characterized by variable aryl ketone moieties and linear polyketide chains (bearing alkyne/azide handles and fluorine) flanking the polyether scaffold. By providing direct information on microorganism tolerance and enzyme processing of unnatural malonyl-ACP analogues, as well as on the amenability of unnatural polyketides to further structural modifications, the chemical probes constitute invaluable tools for the development of novel mutasynthesis and synthetic biology.
Co-reporter:Dr. Manuela Tosin;Luke Smith; Peter F. Leadlay
Angewandte Chemie International Edition 2011 Volume 50( Issue 50) pp:11930-11933
Publication Date(Web):
DOI:10.1002/anie.201106323
Co-reporter:Ina Wilkening, Silvia Gazzola, Elena Riva, James S. Parascandolo, Lijiang Song and Manuela Tosin
Chemical Communications 2016 - vol. 52(Issue 68) pp:NaN10395-10395
Publication Date(Web):2016/08/02
DOI:10.1039/C6CC04681A
Malonyl carba(dethia) N-decanoyl cysteamine methyl esters and novel acetoxymethyl esters were utilised as second-generation probes for polyketide intermediate capture. The use of these tools in vivo led to the characterisation of an almost complete set of biosynthetic intermediates from a modular assembly line, providing a first kinetic overview of intermediate processing leading to complex natural product formation.
Co-reporter:Marie E. Yurkovich, Robert Jenkins, Yuhui Sun, Manuela Tosin and Peter F. Leadlay
Chemical Communications 2017 - vol. 53(Issue 13) pp:NaN2185-2185
Publication Date(Web):2017/01/26
DOI:10.1039/C6CC09934C
Following the in vivo investigation of thiotetronate assembly in Lentzea sp. and in S. thiolactonus NRRL 15439 (Havemann et al., Chem. Commun., 2017, DOI: 10.1039/c6cc09933e), the minimal set of genes required for thiolactomycin production was determined through heterologous expression and the mechanism for polyketide assembly was established in vitro through incubation of recombinant TlmB with its substrates in the presence of either nonhydrolysable or hydrolysable chemical probes. The results presented here constitute unequivocal evidence of enzymatic processing by an unusual iterative polyketide synthase.
Co-reporter:Judith Havemann, Marie E. Yurkovich, Robert Jenkins, Sophia Harringer, Weixin Tao, Shishi Wen, Yuhui Sun, Peter F. Leadlay and Manuela Tosin
Chemical Communications 2017 - vol. 53(Issue 11) pp:NaN1915-1915
Publication Date(Web):2017/01/25
DOI:10.1039/C6CC09933E
Chemical ‘chain termination’ probes were utilised for the investigation of thiotetronate antibiotic biosynthesis in the filamentous bacteria Lentzea sp. and Streptomyces thiolactonus NRRL 15439. The use of these tools led to the capture of biosynthetic intermediates involved in the thiotetronate polyketide backbone assembly, providing first insights into substrate specificity and in vivo intermediate processing by unusual iterative synthases.
Co-reporter:Hirokazu Kage, Elena Riva, James S. Parascandolo, Martin F. Kreutzer, Manuela Tosin and Markus Nett
Organic & Biomolecular Chemistry 2015 - vol. 13(Issue 47) pp:NaN11417-11417
Publication Date(Web):2015/10/28
DOI:10.1039/C5OB02009C
Synthetic chain terminators were used to capture the biosynthetic intermediates from a partially reducing iterative type I polyketide synthase, which is integrated into a multimodular biosynthesis enzyme. The off-loaded metabolites clarified the timing of ketoreduction and aromatization in the assembly of the antibiotic micacocidin.
Co-reporter:Y. T. Candace Ho, Daniel J. Leng, Francesca Ghiringhelli, Ina Wilkening, Dexter P. Bushell, Otto Köstner, Elena Riva, Judith Havemann, Daniele Passarella and Manuela Tosin
Chemical Communications 2017 - vol. 53(Issue 52) pp:NaN7091-7091
Publication Date(Web):2017/06/19
DOI:10.1039/C7CC02427D
Chemical probes were devised and evaluated for the capture of biosynthetic intermediates involved in the bio-assembly of the nonribosomal peptide echinomycin. Putative intermediate peptide species were isolated and characterised, providing fresh insights into pathway substrate flexibility and paving the way for novel chemoenzymatic approaches towards unnatural peptides.