Teruyuki Komatsu

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Organization: Chuo University , Japan
Department: Department of Applied Chemistry, Faculty of Science and Engineering
Title: (PhD)
Co-reporter:Ryuichi Shinohara, Taiga Yamada, Boris Schade, Christoph Böttcher, Takaaki Sato, Natsuhiko Sugimura, Toshimichi Shibue, and Teruyuki Komatsu
The Journal of Physical Chemistry Letters 2017 Volume 8(Issue 4) pp:
Publication Date(Web):February 2, 2017
DOI:10.1021/acs.jpclett.6b02907
A hemoglobin (Hb) wrapped covalently by three human serum albumins (HSAs) is a triangular protein cluster designed as an artificial O2-carrier and red blood cell substitute. We report the structural insights into this Hb-HSA3 cluster in aqueous medium revealed by 3D reconstruction based on cryogenic transmission electron microscopy (cryo-TEM) data and small-angle X-ray scattering (SAXS) measurements. Cryo-TEM observations showed individual particles with approximately 15 nm diameter in the vitrified ice layer. Subsequent image processing and 3D reconstruction proved the expected spatial arrangements of an Hb in the center and three HSAs at the periphery. SAXS measurements demonstrated the monodispersity of the Hb-HSA3 cluster having a molecular mass of 270 kDa. The pair-distance distribution function suggested the existence of oblate-like particles with a maximum dimeter of ∼17 nm. The supramolecular 3D structure reconstructed from the SAXS intensity using an ab initio procedure was similar to that obtained from cryo-TEM data.
Co-reporter:Takuya Kimura, Ryuichi Shinohara, Christoph Böttcher and Teruyuki Komatsu  
Journal of Materials Chemistry A 2015 vol. 3(Issue 30) pp:6157-6164
Publication Date(Web):10 Jun 2015
DOI:10.1039/C5TB00540J
This report describes the synthesis, structure, and O2-binding properties of core–shell clusters composed of human haemoglobin A (HbA) in the centre and human serum albumin (HSA) at the periphery (HbA–HSAm) as potential O2-carriers designed as red blood cell (RBC) substitutes. Protein clusters were prepared by covalent linkages between HbA lysins and HSA cysteine-34 using a heterobifunctional cross-linker, succinimidyl-4-(N-maleimidomethyl)cyclohexane-1-carboxylate. Major products (m = 2, 3, 4) were isolated using gel filtration chromatography. The low isoelectric points (pI = 5.0–5.2) of the clusters were almost identical to that of HSA, proving the wrapping of HbA by negatively charged HSA. The 3D reconstruction of HbA–HSA3 based on transmission electron microscopy images revealed a complete triangular structure. The proposed geometries enabled us to assign a possible spatial arrangement of the HbA centre and HSA periphery. The HbA–HSAm clusters showed higher O2-affinities (P50 = 8–9 Torr) than the native HbA. The clusters prepared under N2 atmosphere showed a low O2-affinity (P50 = 26 Torr) resembling those of human RBC. Moreover, the cluster containing an αα-cross-linked HbA with bis(3,5-dibromosalicyl)fumarate showed a markedly low O2-affinity (P50 = 35 Torr). These HbA–HSAm clusters with various O2-affinities can support a new generation of RBC substitutes, which can be better tuned to play a role in O2 transport.
Co-reporter:Y. Daijima and T. Komatsu  
Chemical Communications 2014 vol. 50(Issue 94) pp:14716-14719
Publication Date(Web):03 Sep 2014
DOI:10.1039/C4CC06076H
We describe the synthesis of a haemoglobin (Hb) wrapped covalently by recombinant human serum albumin mutants [HSA(Y161H)] containing Mn(III) protoporphyrin IX (MnPP), the Hb–[HSA(Y161H)–MnPP]3 cluster, highlighting the formation of its O2-complex stable even in H2O2 solution.
Co-reporter:S. Yuge, M. Akiyama and T. Komatsu  
Chemical Communications 2014 vol. 50(Issue 68) pp:9640-9643
Publication Date(Web):10 Jun 2014
DOI:10.1039/C4CC03632H
We describe the template synthesis of human serum albumin microtubes (MTs) and highlight their Escherichia coli (E. coli) trapping capability with extremely high efficiency. The E. coli was loaded into the one-dimensional pore space interior of the tubule. Similar MTs including an Fe3O4 layer also captured E. coli and were manipulated by exposure to a magnetic field.
Co-reporter:Yuta Shiraishi;Motofusa Akiyama;Takaaki Sato;Minoru Hattori
Polymers for Advanced Technologies 2014 Volume 25( Issue 11) pp:1247-1251
Publication Date(Web):
DOI:10.1002/pat.3299

This paper describes the synthesis and structure of protein nanotube (NT) with a lectin interior surface and its size-dependent dextran loading ability in aqueous medium. The NTs were prepared using an alternating layer-by-layer build-up assembly of poly-l-arginine (PLA) and human serum albumin (HSA) in a track-etched polycarbonate (PC) membrane (pore diameter, 400 nm), subsequently coating concanavalin A (ConA) as the last layer. Dissolution of the PC template yielded (PLA/HSA)2PLA/ConA NTs with 419 ± 14 nm outer diameter and 50 ± 7 nm wall thickness. In a 2-[4-(2-hydroxyethyl)-1-piperazinyl]ethanesulfonic acid (HEPES) buffered solution, the NTs captured fluorescein isothiocyanate (FITC)-labeled dextran [molecular weight 4 kDa, FITC-Dex(4k)] efficiently into the pores. The ratio of the bound FITC-Dex(4kDa)/ConA was estimated to be 2.1 (mol/mol). Two of four glucosyl-residue binding sites of ConA on the wall presumably faced to the aqueous inner phase of the tube, and they can bind FITC-Dex(4k). On the one hand, only half amount of FITC-Dex was loaded into the channels when the molecular weight of the dextran is greater than 20 kDa. Small-angle X-ray scattering measurements revealed that the radius of gyration (Rg) of the FITC-Dex(4k) is 1.45 nm (5.0 mg/ml), which is satisfactorily small to interact with the each binding site of ConA independently. In contrast, the Rg values of FITC-Dex(20k) and FITC-Dex(40k) were 3.75 nm (5.0 mg/ml) and 6.62 nm (4.0 mg/ml), respectively. These large dextrans probably formed an equivalent complex with ConA on the tube wall. Copyright © 2014 John Wiley & Sons, Ltd.

Co-reporter:Ryunosuke Kato;Dr. Matofusa Akiyama;Dr. Hiroyoshi Kawakami;Dr. Teruyuki Komatsu
Chemistry – An Asian Journal 2014 Volume 9( Issue 1) pp:83-86
Publication Date(Web):
DOI:10.1002/asia.201301285

Abstract

The superoxide radical anion (O2.−) is biologically toxic and contributes to the pathogenesis of various diseases. Here we describe the superoxide dismutase (SOD) activity of human serum albumin (HSA) complexed with a single CuII ion at the N-terminal end (HSA–Cu complex). The structure of this naturally occurring copper-coordinated blood serum protein has been characterized by several physicochemical measurements. The O2.− dismutation ability of the HSA–Cu (1:1) complex is almost the same as that of the well-known SOD mimics, such as MnIII-tetrakis(N-methylpyridinium)porphyrin. Interestingly, the HSA–Cu complex does not induce a subsequent Fenton reaction to produce the hydroxyl radical (OH.), which is one of the most harmful reactive oxygen species.

Co-reporter:Ryunosuke Kato, Yuya Kobayashi, Motofusa Akiyama and Teruyuki Komatsu  
Dalton Transactions 2013 vol. 42(Issue 45) pp:15889-15892
Publication Date(Web):28 Jun 2013
DOI:10.1039/C3DT51418H
Genetically engineered human serum albumin (HSA) mutants complexed Mn(III) protoporphyrin IX (MnPP) in the haem pocket showed superoxide dismutase activity. Replacement of a proximal Tyr-161 by non-coordinating Leu caused a remarkable increase in enzyme activity.
Co-reporter:Ryunosuke Kato
Journal of Inorganic and Organometallic Polymers and Materials 2013 Volume 23( Issue 1) pp:167-171
Publication Date(Web):2013 January
DOI:10.1007/s10904-012-9725-5
We report structure and photocatalytic activity of solid nanotubes comprising iron oxide (hematite, α-Fe2O3) nanoparticles. The initial precursor cylinders were prepared by alternating layer-by-layer assembly of poly-l-arginine (PLA) and iron-storage protein ferritin in a track-etched polycarbonate membrane (pore diameter: 400 nm) with subsequent dissolution of the template. The obtained (PLA/ferritin)3 nanotubes (outer diameter: 410 ± 14 nm) were calcinated at 500 or 700 °C under air, yielding iron oxide nanotubes. After the calcination, the cylindrical hollow structure completely remained, but its diameter, wall thickness, and maximum length were significantly diminished. SEM measurements revealed that the nanotubes prepared at 500 °C consist of uniform hematite nanoparticles with ca. 5 nm diameter and the nanotubes calcinated at 700 °C are composed of ca. 20 nm hematite nanoparticles. These nanotubes showed efficient photocatalytic activity for degradation of 4-chlorophenol; higher catalytic activity was observed in the reaction with 5 nm hematite nanoparticle nanotubes.
Co-reporter:Shun Goto, Yusuke Amano, Motofusa Akiyama, Christoph Böttcher, and Teruyuki Komatsu
Langmuir 2013 Volume 29(Issue 46) pp:14293-14300
Publication Date(Web):2017-2-22
DOI:10.1021/la403283x
We describe the synthesis, structure, and catalytic activity of human serum albumin (HSA) nanotubes (NTs) including gold nanoparticles (AuNPs) as a layered wall component. The NTs were fabricated as an alternating layer-by-layer assembly of AuNP and HSA admixture (a negatively charged part) and poly-l-arginine (PLA, a positively charged part) into a track-etched polycarbonate membrane (400 nm pore diameter) with subsequent dissolution of the template. SEM images showed the formation of uniform hollow cylinders of (PLA/AuNP-HSA)3 with a 426 ± 12 nm outer diameter and 65 ± 7 nm wall thickness. Transmission electron microscopy and energy dispersive X-ray measurements revealed high loading of AuNPs in the tubular wall. HSAs bind strongly onto the individual AuNP (K = 1.25 × 109 M–1), generating a core–shell AuNP-HSA corona, which is the requirement of the robust NT formation. Calcination of the (PLA/AuNP-HSA)3 NTs at 500 °C under air yielded red solid NTs composed of thermally fused AuNPs. From the mass decrease by heat treatment, we calculated the weight of the organic components (PLA and HSA) and thereby constructed a six-layer model of the tube. The (PLA/AuNP-HSA)3 NTs serve as a heterogeneous catalyst for reduction of 4-nitrophenol with sodium borohydrate. Furthermore, implantation of the stiff (PLA/AuNP-HSA)3 NTs vertically onto glass plate produced uniformly cylindrical tube arrays.
Co-reporter:Daiki Tomita, Takuya Kimura, Hitomi Hosaka, Yuta Daijima, Risa Haruki, Kai Ludwig, Christoph Böttcher, and Teruyuki Komatsu
Biomacromolecules 2013 Volume 14(Issue 6) pp:
Publication Date(Web):April 29, 2013
DOI:10.1021/bm400204y
Covalent core–shell structured protein clusters of hemoglobin (Hb) and human serum albumin (HSA) (HbX-HSAm) (m = 2, 3) with novel physiological properties were generated by linkage of Hb surface lysins to HSA cysteine-34 via an α-succinimidyl-ε-maleimide cross-linker (X: 1 or 2). The isoelectric points of HbX-HSAm (pI = 5.0–5.2) were markedly lower than that of Hb and almost identical to that of HSA. AFM and TEM measurements revealed a triangular Hb1-HSA3 cluster in aqueous medium. The complete 3D structure of Hb1-HSA3 based on TEM data was reconstructed, revealing two possible conformer variants. All HbX-HSAm clusters showed a moderately higher O2 affinity than the native Hb. Furthermore, the exterior HSA units possess a remarkable ability to bind lumiflavin (LF). The addition of NADH to an aqueous solution of the met-Hb2-(HSA-LF)3 cluster reduced the inactive ferric Hb center to the functional ferrous Hb. This O2-carrying hemoprotein cluster with strongly negative surface net charge, high O2 affinity, and NADH-dependent reductase unit can support a new generation of molecular architecture for red blood cell substitutes.
Co-reporter:Teruyuki Komatsu  
Nanoscale 2012 vol. 4(Issue 6) pp:1910-1918
Publication Date(Web):12 Dec 2011
DOI:10.1039/C1NR11224D
This review presents highlights of our latest results of studies directed at developing protein-based smart nanotubes for biomedical applications. These practical biocylinders were prepared using an alternate layer-by-layer (LbL) assembly of protein and oppositely charged poly(amino acid) into a nanoporous polycarbonate (PC) membrane (pore diameter, 400 nm), with subsequent dissolution of the template. The tube wall typically comprises six layers of poly-L-arginine (PLA) and human serum albumin (HSA) [(PLA/HSA)3]. The obtained (PLA/HSA)3 nanotubes (NTs) can be dispersed in aqueous medium and are hydrated significantly. Several ligands for HSA, such as zinc(II) protoporphyrin IX (ZnPP), were bound to the HSA component in the cylindrical wall. Similar NTs comprising recombinant HSA mutant, which has a strong binding affinity for ZnPP, captured the ligand more tightly. The Fe3O4-coated NTs can be collected easily by exposure to a magnetic field. The hybrid NTs bearing a single avidin layer as an internal wall captured biotin-labeled nanoparticles into the central channel when their particle size is sufficiently small to enter the pores. The NTs with an antibody surface interior entrapped human hepatitis B virus with size selectivity. It is noteworthy that the infectious Dane particles were encapsulated completely into the hollows. Other HSA-based NTs having an α-glucosidase inner wall hydrolysed a glucopyranoside to yield α-D-glucose. A perspective of the practical use of the protein-based NTs is also described.
Co-reporter:Dr. Teruyuki Komatsu;Dr. Takaaki Sato;Dr. Christoph Boettcher
Chemistry – An Asian Journal 2012 Volume 7( Issue 1) pp:201-206
Publication Date(Web):
DOI:10.1002/asia.201100606

Abstract

A nanocylindrical wall structure was obtained by layer-by-layer (LbL) assembly of poly-L-arginine (PLA) and human serum albumin (HSA) and characterized by scanning electron microscopy (SEM), scanning force microscopy (SFM), and cryogenic transmission electron microscopy (cryo-TEM). SEM and SFM measurements of a lyophilized powder of (PLA/HSA)3 nanotubes yielded images of round, chimney-like architectures with approximately 100 nm wall thickness. Cryo-TEM images of the hydrated sample revealed that the tube walls are composed of densely packed HSA molecules. Moreover, when small-angle X-ray scattering was used to characterize the individual PLA and HSA components in aqueous solutions, maximum diameters of approximately 28 nm and 8 nm were obtained, respectively. These values indicate the minimum thickness of wall layers consisting of PLA and HSA. It can also be concluded from SEM as well as from cryo-TEM images that the protein cylinders are considerably swollen in the presence of water. Furthermore, HSA retains esterase activity if assembled in nanotubes, as indicated by measurements of para-nitrophenyl acetate hydrolysis under semi-physiological conditions (pH 7.4, 22 °C). The enzyme activity parameters (Michaelis constant, Km, and catalytic constant, kcat) were comparable to those of free HSA.

Co-reporter:Teruyuki Komatsu ; Xue Qu ; Hiromi Ihara ; Mitsuhiro Fujihara ; Hiroshi Azuma ;Hisami Ikeda
Journal of the American Chemical Society 2011 Volume 133(Issue 10) pp:3246-3248
Publication Date(Web):February 22, 2011
DOI:10.1021/ja1096122
Infectious hepatitis B virus (HBV), namely Dane particles (DPs), consists of a core nucleocapsid including genome DNA covered with an envelope of hepatitis B surface antigen (HBsAg). We report the synthesis, structure, and HBV-trapping capability of multilayered protein nanotubes having an anti-HBsAg antibody (HBsAb) layer as an internal wall. The nanotubes were prepared using an alternating layer-by-layer assembly of human serum albumin (HSA) and oppositely charged poly-l-arginine (PLA) into a nanoporous polycarbonate (PC) membrane (pore size, 400 nm), followed by depositions of poly-l-glutamic acid (PLG) and HBsAb. Subsequent dissolution of the PC template yielded (PLA/HSA)2PLA/PLG/HBsAb nanotubes (AbNTs). The SEM measurements revealed the formation of uniform hollow cylinders with a 414 ± 16 nm outer diameter and 59 ± 4 nm wall thickness. In an aqueous medium, the swelled nanotubes captured noninfectious spherical small particles of HBsAg (SPs); the binding constant was 3.5 × 107 M−1. Surprisingly, the amount of genome DNA in the HBV solution (HBsAg-positive plasma or DP-rich solution) decreased dramatically after incubation with the AbNTs (−3.9 log order), which implies that the infectious DPs were completely entrapped into the one-dimensional pore space of the AbNTs.
Co-reporter:Teruyuki Komatsu;Nao Kobayashi
Polymers for Advanced Technologies 2011 Volume 22( Issue 8) pp:1315-1318
Publication Date(Web):
DOI:10.1002/pat.1921

This communication describes the synthesis and structure of multilayered protein nanotubes bearing a magnetite (Fe3O4) surface exterior, and their binding capability for zinc(II)-protoporphyrin IX (ZnPP) in aqueous medium. The nanotubes were fabricated using an alternating layer-by-layer (LbL) assembly of human serum albumin (HSA) and poly-L-arginine (PLA) in a track-etched polycarbonate (PC) membrane (pore size, 400 nm), which had been precoated in advance with Fe3O4 nanoparticles. Dissolution of the PC template yielded Fe3O4(PLA/HSA)3 nanotubes. SEM measurements revealed the formation of uniform hollow cylinders with 417 ± 16 nm outer diameter and 56 ± 7 nm wall thickness. TEM observations confirmed the homogeneous outer surface of Fe3O4. In an aqueous medium, the nanotubes captured ZnPP into the swollen wall. The ZnPP-loaded protein nanotubes were collected by exposure to a magnetic field. Copyright © 2011 John Wiley & Sons, Ltd.

Co-reporter:Dr. Teruyuki Komatsu;Hiromi Terada;Nao Kobayashi
Chemistry - A European Journal 2011 Volume 17( Issue 6) pp:1849-1854
Publication Date(Web):
DOI:10.1002/chem.201001937

Abstract

This report describes the synthesis and enzyme activities of multilayered protein nanotubes with an α-glucosidase (αGluD) interior surface. The nanotubes were prepared by using an alternating layer-by-layer (LbL) assembly of human serum albumin (HSA) and oppositely charged poly-L-arginine (PLA) into a track-etched polycarbonate (PC) membrane (pore size=400 nm) followed by addition of αGluD as the last layer of the wall. Subsequent dissolution of the PC template yielded (PLA/HSA)2PLA/αGluD nanotubes. SEM measurements revealed the formation of uniform hollow cylinders with (413±17) nm outer diameter and (52±3) nm wall thickness. In aqueous media, the nanotubes captured a fluorogenic glucopyranoside, 4-methyl-umbelliferyl-α-D-glucopyranoside (MUGlc), into their one-dimensional pore space and hydrolyzed the substrate efficiently to form α-D-glucose. We determined the enzyme parameters (Michaelis constant, KM, and catalytic constant, kcat, values) of the protein nanotubes. The several-micrometers-long cylinders were of sufficient length to be spun down by centrifugation at 4000 g, so the product could therefore be easily separated. Similar biocatalysts were prepared by complexation of biotinylated-αGluD into HSA-based nanotubes bearing a single avidin layer as an internal surface. The obtained hybrid nanotubes also exhibited the same enzyme activity for the MUGlc hydrolysis.

Co-reporter:Takuya Kimura, Ryuichi Shinohara, Christoph Böttcher and Teruyuki Komatsu
Journal of Materials Chemistry A 2015 - vol. 3(Issue 30) pp:NaN6164-6164
Publication Date(Web):2015/06/10
DOI:10.1039/C5TB00540J
This report describes the synthesis, structure, and O2-binding properties of core–shell clusters composed of human haemoglobin A (HbA) in the centre and human serum albumin (HSA) at the periphery (HbA–HSAm) as potential O2-carriers designed as red blood cell (RBC) substitutes. Protein clusters were prepared by covalent linkages between HbA lysins and HSA cysteine-34 using a heterobifunctional cross-linker, succinimidyl-4-(N-maleimidomethyl)cyclohexane-1-carboxylate. Major products (m = 2, 3, 4) were isolated using gel filtration chromatography. The low isoelectric points (pI = 5.0–5.2) of the clusters were almost identical to that of HSA, proving the wrapping of HbA by negatively charged HSA. The 3D reconstruction of HbA–HSA3 based on transmission electron microscopy images revealed a complete triangular structure. The proposed geometries enabled us to assign a possible spatial arrangement of the HbA centre and HSA periphery. The HbA–HSAm clusters showed higher O2-affinities (P50 = 8–9 Torr) than the native HbA. The clusters prepared under N2 atmosphere showed a low O2-affinity (P50 = 26 Torr) resembling those of human RBC. Moreover, the cluster containing an αα-cross-linked HbA with bis(3,5-dibromosalicyl)fumarate showed a markedly low O2-affinity (P50 = 35 Torr). These HbA–HSAm clusters with various O2-affinities can support a new generation of RBC substitutes, which can be better tuned to play a role in O2 transport.
Co-reporter:S. Yuge, M. Akiyama and T. Komatsu
Chemical Communications 2014 - vol. 50(Issue 68) pp:NaN9643-9643
Publication Date(Web):2014/06/10
DOI:10.1039/C4CC03632H
We describe the template synthesis of human serum albumin microtubes (MTs) and highlight their Escherichia coli (E. coli) trapping capability with extremely high efficiency. The E. coli was loaded into the one-dimensional pore space interior of the tubule. Similar MTs including an Fe3O4 layer also captured E. coli and were manipulated by exposure to a magnetic field.
Co-reporter:Ryunosuke Kato;Yuya Kobayashi;Motofusa Akiyama
Dalton Transactions 2013 - vol. 42(Issue 45) pp:
Publication Date(Web):2013/10/29
DOI:10.1039/C3DT51418H
Genetically engineered human serum albumin (HSA) mutants complexed Mn(III) protoporphyrin IX (MnPP) in the haem pocket showed superoxide dismutase activity. Replacement of a proximal Tyr-161 by non-coordinating Leu caused a remarkable increase in enzyme activity.
Co-reporter:Y. Daijima and T. Komatsu
Chemical Communications 2014 - vol. 50(Issue 94) pp:NaN14719-14719
Publication Date(Web):2014/09/03
DOI:10.1039/C4CC06076H
We describe the synthesis of a haemoglobin (Hb) wrapped covalently by recombinant human serum albumin mutants [HSA(Y161H)] containing Mn(III) protoporphyrin IX (MnPP), the Hb–[HSA(Y161H)–MnPP]3 cluster, highlighting the formation of its O2-complex stable even in H2O2 solution.
Phenyl radical
Oxacyclotridecan-2-one
Adenosine5'-(trihydrogen diphosphate), P'®5'-ester with 1,4-dihydro-1-b-D-ribofuranosyl-3-pyridinecarboxamide
2,2',2'',2'''-porphyrin-5,10,15,20-tetrayltetraaniline
Hydroxyl
Benzothiazolium,3-ethyl-2-[3-(3-ethyl-2(3H)-benzothiazolylidene)-1-propen-1-yl]-, iodide (1:1)
Riboflavin5'-(dihydrogen phosphate)
21H,23H-Porphine-2,18-dipropanoic acid, 7,12-diethenyl-3,8,13,17-tetramethyl-
Lipase B