Co-reporter:Binne Zwanenburg;Henk Regeling;Colinda W. van Tilburg-Joukema;Bram van Oss;Peter Molenveld;René de Gelder;Paul Tinnemans
European Journal of Organic Chemistry 2016 Volume 2016( Issue 12) pp:2163-2169
Publication Date(Web):
DOI:10.1002/ejoc.201600132
Abstract
Strigolactones (SLs) constitute an important new class of plant hormones. Their isolation from natural resources, such as root exudates, is laborious and difficult. Therefore, synthetic SLs are needed to discover their (biological) properties. Such syntheses involve many steps. When repeating a published procedure for the synthesis of orobanchol, we noticed that the structure of the synthesized material was ambiguous. This structure was secured by means of X-ray analysis. An essential step in the synthesis, namely an allylic oxidation of the ABC scaffold, was significantly improved by using Pd/C and tert-butyl hydroperoxide (Corey's method). The second issue deals with the structure of the four stereoisomers of 5-deoxystrigol. The stereochemistry of these compounds was based on the use of Welzel's empirical rules for CD spectra. By means of X-ray analysis the stereochemistry of one of the stereoisomers was established unambiguously, thereby securing the configuration of all four isomers.
Co-reporter:Binne Zwanenburg, Sandip K. Nayak, Tatsiana V. Charnikhova, Harro J. Bouwmeester
Bioorganic & Medicinal Chemistry Letters 2013 Volume 23(Issue 18) pp:5182-5186
Publication Date(Web):15 September 2013
DOI:10.1016/j.bmcl.2013.07.004
Strigolactones (SLs) are new plant hormones with varies important bio-functions. This Letter deals with germination of seeds of parasitic weeds. Natural SLs have a too complex structure for synthesis. Therefore, there is an active search for SL analogues and mimics with a simpler structure with retention of activity. SL analogues all contain the D-ring connected with an enone moiety through an enol ether unit. A new mechanism for the hydrolysis SL analogues involving bidentate bound water and an α,β-hydrolase with a Ser-His-Asp catalytic triad has been proposed. Newly discovered SL mimics only have the D-ring with an appropriate leaving group at C-5. A mode of action for SL mimics was proposed for which now supporting evidence is provided. As predicted an extra methyl group at C-4 of the D-ring blocks the germination of seeds of parasitic weeds.
Co-reporter:Heetika Malik, Wouter Kohlen, Muhammad Jamil, Floris P. J. T. Rutjes and Binne Zwanenburg
Organic & Biomolecular Chemistry 2011 vol. 9(Issue 7) pp:2286-2293
Publication Date(Web):08 Nov 2010
DOI:10.1039/C0OB00735H
Strigolactones are signaling compounds in plants of increasing importance. In this paper the focus is on their activity as germinating agents for seeds of parasitic weeds. The syntheses of aromatic A-ring analogues of the germination stimulant orobanchol have been described. Starting substrate is the ABC unit of the stimulant GR24. Oxidation at the C-4 position gives a 4-oxo derivative which on subsequent reduction produces two C-4 epimeric alcohols, syn and anti in a ratio of 82:3. For practical access of the C-4antialcohol, the predominant syn epimer is inverted by a Mitsunobu procedure. The antiC-4 alcohol is then coupled with the D-ring in a one-pot two-step process involving a formylation and a reaction with bromobutenolide to give a mixture of the diastereomeric aromatic A-ring analogues of orobanchol. In contrast, the synC-4 alcohol cannot be coupled directly with the D-ring. Protection of the C-4synOH is a prequisite. The best protecting function is the SEM group as deprotection after coupling with the D-ring can then readily be achieved. The structures of these new analogues have been ascertained by X-ray analyses. Both diastereomers of the C-4syn as well as the C-4antiorobanchol analogues have been tested as germination agents of seeds of Striga hermonthica and Orobanche ramosa. In addition, the acetates of both epimeric C-4 alcohols have been prepared and tested. Both diastereomers of the 4-oxo derivative have been prepared and bioassayed as well. The bioassays reveal that the diastereomers having the natural relative configuration are most active. The data also suggest that hydrogen bonding is not an important factor in the binding of the stimulant molecules in the receptor.
Co-reporter:Binne Zwanenburg, Alinanuswe S. Mwakaboko
Bioorganic & Medicinal Chemistry 2011 Volume 19(Issue 24) pp:7394-7400
Publication Date(Web):15 December 2011
DOI:10.1016/j.bmc.2011.10.057
A series of new strigolactone (SL) analogues is derived from simple and cheap starting materials. These SL analogues are designed using a working model. The first analogue is a modified Nijmegen-1, the second contains saccharin as substituent (bio-isosteric replacement of a carbonyl in Nijmegen-1 by a sulfonyl group) and the third one is derived from p-tolylmalondialdehyde. These new SL analogues are appreciably to highly active as germination stimulants of seeds of Striga hermonthica and Orobanche cernua. The SL analogue derived from saccharin is the most active one.A serendipitous and most rewarding finding is that the compound obtained by a direct coupling of saccharin with the chlorobutenolide exhibits a high germination activity especially towards O. cernua seeds. Two other SL mimics are obtained from benzoic and salicylic aid by a direct coupling reaction with chlorobutenolide, both of them are very active germinating agents. These SL mimics represent a new type of germination stimulants. A tentative molecular mechanism for the mode of action of these SL mimics has been proposed.
Co-reporter:Alinanuswe S. Mwakaboko, Binne Zwanenburg
Bioorganic & Medicinal Chemistry 2011 Volume 19(Issue 16) pp:5006-5011
Publication Date(Web):15 August 2011
DOI:10.1016/j.bmc.2011.06.057
The single step synthesis of a newly designed series of strigolactones (SLs) from cyclic keto enols is described. The germinating activity of these SL analogues towards seeds of the parasitic weeds Striga and Orobanche spp. is reported. The first of these SL analogues are derived from the hydroxyl γ-pyrones kojic acid and maltol, the second type from hydroxyl α-pyrones, namely, 4-hydroxy-6-methyl-2H-pyran-2-one and 4-hydroxy-coumarin and the third type from 1,3-diketones, namely, 1,3-cyclohexane-dione (dimedone) and tricyclic 1,3-dione. All keto enols are coupled in a single step with the appropriate D-ring precursor in the presence of a base to give the desired SL analogues. All SL analogues are acceptably biologically active in inducing the germination of seeds of Striga hermonthica and Orobanchecernua. Most interesting are the analogues derived from 4-hydroxy coumarin and dimedone, as they have a remarkably high biological activity towards the seeds of parasitic weeds at relatively low concentrations, comparable with that of the general standard stimulant GR24.
Co-reporter:Heetika Malik, Floris P.J.T. Rutjes, Binne Zwanenburg
Tetrahedron 2010 66(35) pp: 7198-7203
Publication Date(Web):
DOI:10.1016/j.tet.2010.06.072
Co-reporter:Andries A. Volkers, Xue S. Mao, Antonius J.H. Klunder, Binne Zwanenburg
Tetrahedron 2009 65(11) pp: 2364-2367
Publication Date(Web):
DOI:10.1016/j.tet.2009.01.002
Co-reporter:Antonius J.H. Klunder, Andries A. Volkers, Binne Zwanenburg
Tetrahedron 2009 65(11) pp: 2356-2363
Publication Date(Web):
DOI:10.1016/j.tet.2009.01.012
Co-reporter:Andries A. Volkers, Antonius J.H. Klunder, Binne Zwanenburg
Tetrahedron 2009 65(1) pp: 389-395
Publication Date(Web):
DOI:10.1016/j.tet.2008.10.028
Co-reporter:Binne Zwanenburg, Tomáš Pospíšil
Molecular Plant (January 2013) Volume 6(Issue 1) pp:38-62
Publication Date(Web):1 January 2013
DOI:10.1093/mp/sss141
Strigolactones (SLs) constitute a new class of plant hormones which are active as germination stimulants for seeds of parasitic weeds of Striga, Orobanche, and Pelipanchi spp, in hyphal branching of arbuscular mycorrhizal (AM) fungi and as inhibitors of shoot branching. In this review, the focus is on molecular features of these SLs. The occurrence of SLs in root exudates of host plants is described. The naming protocol for SL according to the International Union of Pure and Applied Chemistry (IUPAC) rules and the ‘at a glance’ method is explained. The total synthesis of some natural SLs is described with details for all eight stereoisomers of strigol. The problems encountered with assigning the correct structure of natural SLs are analyzed for orobanchol, alectrol, and solanacol. The structure–activity relationship of SLs as germination stimulants leads to the identification of the bioactiphore of SLs. Together with a tentative mechanism for the mode of action, a model has been derived that can be used to design and prepare active SL analogs. This working model has been used for the preparation of a series of new SL analogs such as Nijmegen-1, and analogs derived from simple ketones, keto enols, and saccharine. The serendipitous finding of SL mimics which are derived from the D-ring in SLs (appropriately substituted butenolides) is reported. For SL mimics, a mode of action is proposed as well. Recent new results support this proposal. The stability of SLs and SL analogs towards hydrolysis is described and some details of the mechanism of hydrolysis are discussed as well. The attempted isolation of the protein receptor for germination and the current status concerning the biosynthesis of natural SLs are briefly discussed. Some non-SLs as germinating agents are mentioned. The structure–activity relationship for SLs in hyphal branching of AM fungi and in repression of shoot branching is also analyzed. For each of the principle functions, a working model for the design of new active SL analogs is described and its applicability and implications are discussed. It is shown that the three principal functions use a distinct perception system. The importance of stereochemistry for bioactivity has been described for the various functions.SummaryStrigolactones are new plant hormones that induce germination of parasitic weed seeds, inhibit shoot branching, and are branching factors for AM fungi. Structure–activity relationships provide insight into their mode of action and give a model substrate for designing new active analogs.
Co-reporter:Heetika Malik, Wouter Kohlen, Muhammad Jamil, Floris P. J. T. Rutjes and Binne Zwanenburg
Organic & Biomolecular Chemistry 2011 - vol. 9(Issue 7) pp:NaN2293-2293
Publication Date(Web):2010/11/08
DOI:10.1039/C0OB00735H
Strigolactones are signaling compounds in plants of increasing importance. In this paper the focus is on their activity as germinating agents for seeds of parasitic weeds. The syntheses of aromatic A-ring analogues of the germination stimulant orobanchol have been described. Starting substrate is the ABC unit of the stimulant GR24. Oxidation at the C-4 position gives a 4-oxo derivative which on subsequent reduction produces two C-4 epimeric alcohols, syn and anti in a ratio of 82:3. For practical access of the C-4antialcohol, the predominant syn epimer is inverted by a Mitsunobu procedure. The antiC-4 alcohol is then coupled with the D-ring in a one-pot two-step process involving a formylation and a reaction with bromobutenolide to give a mixture of the diastereomeric aromatic A-ring analogues of orobanchol. In contrast, the synC-4 alcohol cannot be coupled directly with the D-ring. Protection of the C-4synOH is a prequisite. The best protecting function is the SEM group as deprotection after coupling with the D-ring can then readily be achieved. The structures of these new analogues have been ascertained by X-ray analyses. Both diastereomers of the C-4syn as well as the C-4antiorobanchol analogues have been tested as germination agents of seeds of Striga hermonthica and Orobanche ramosa. In addition, the acetates of both epimeric C-4 alcohols have been prepared and tested. Both diastereomers of the 4-oxo derivative have been prepared and bioassayed as well. The bioassays reveal that the diastereomers having the natural relative configuration are most active. The data also suggest that hydrogen bonding is not an important factor in the binding of the stimulant molecules in the receptor.