Anne-Kathrin Duhme-Klair

Find an error

Name:
Organization: University of York , England
Department: Department of Chemistry
Title: (PhD)

TOPICS

Co-reporter:Aurélien B. Ducrot, Ben A. Coulson, Robin N. Perutz, and Anne-Kathrin Duhme-Klair
Inorganic Chemistry 2016 Volume 55(Issue 24) pp:12583-12594
Publication Date(Web):October 1, 2016
DOI:10.1021/acs.inorgchem.6b01485
Nature uses molybdenum-containing enzymes to catalyze oxygen atom transfer (OAT) from water to organic substrates. In these enzymes, the two electrons that are released during the reaction are rapidly removed, one at a time, by spatially separated electron transfer units. Inspired by this design, a Ru(II)–Mo(VI) dyad was synthesized and characterized, with the aim of accelerating the rate-determining step in the cis-dioxo molybdenum-catalyzed OAT cycle, the transfer of an oxo ligand to triphenyl phosphine, via a photo-oxidation process. The dyad consists of a photoactive bis(bipyridyl)-phenanthroline ruthenium moiety that is covalently linked to a bioinspired cis-dioxo molybdenum thiosemicarbazone complex. The quantum yield and luminescence lifetimes of the dyad [Ru(bpy)2(L2)MoO2(solv)]2+ were determined. The major component of the luminescence decay in MeCN solution (τ = 1149 ± 2 ns, 67%) corresponds closely to the lifetime of excited [Ru(bpy)2(phen-NH2)]2+, while the minor component (τ = 320 ± 1 ns, 31%) matches that of [Ru(bpy)2(H2-L2)]2+. In addition, the (spectro)electrochemical properties of the system were investigated. Catalytic tests showed that the dyad-catalyzed OAT from dimethyl sulfoxide to triphenyl phosphine proceeds significantly faster upon irradiation with visible light than in the dark. Methylviologen acts as a mediator in the photoredox cycle, but it is regenerated and hence only required in stoichiometric amounts with respect to the catalyst rather than sacrificial amounts. It is proposed that oxidative quenching of the photoexcited Ru unit, followed by intramolecular electron transfer, leads to the production of a reactive one-electron oxidized catalyst, which is not accessible by electrochemical methods. A significant, but less pronounced, rate enhancement was observed when an analogous bimolecular system was tested, indicating that intramolecular electron transfer between the photosensitizer and the catalytic center is more efficient than intermolecular electron transfer between the separate components.
Co-reporter:Keith S. Wilson;Olga V. Moroz;Anne-K. Duhme-Klair;Johan P. Turkenburg;Daniel J. Raines;Elena V. Blagova
PNAS 2016 Volume 113 (Issue 21 ) pp:5850-5855
Publication Date(Web):2016-05-24
DOI:10.1073/pnas.1520829113
To acquire essential Fe(III), bacteria produce and secrete siderophores with high affinity and selectivity for Fe(III) to mediate its uptake into the cell. Here, we show that the periplasmic binding protein CeuE of Campylobacter jejuni, which was previously thought to bind the Fe(III) complex of the hexadentate siderophore enterobactin (Kd ∼ 0.4 ± 0.1 µM), preferentially binds the Fe(III) complex of the tetradentate enterobactin hydrolysis product bis(2,3-dihydroxybenzoyl-l-Ser) (H5-bisDHBS) (Kd = 10.1 ± 3.8 nM). The protein selects Λ-configured [Fe(bisDHBS)]2− from a pool of diastereomeric Fe(III)-bisDHBS species that includes complexes with metal-to-ligand ratios of 1:1 and 2:3. Cocrystal structures show that, in addition to electrostatic interactions and hydrogen bonding, [Fe(bisDHBS)]2− binds through coordination of His227 and Tyr288 to the iron center. Similar binding is observed for the Fe(III) complex of the bidentate hydrolysis product 2,3-dihydroxybenzoyl-l-Ser, [Fe(monoDHBS)2]3−. The mutation of His227 and Tyr288 to noncoordinating residues (H227L/Y288F) resulted in a substantial loss of affinity for [Fe(bisDHBS)]2− (Kd ∼ 0.5 ± 0.2 µM). These results suggest a previously unidentified role for CeuE within the Fe(III) uptake system of C. jejuni, provide a molecular-level understanding of the underlying binding pocket adaptations, and rationalize reports on the use of enterobactin hydrolysis products by C. jejuni, Vibrio cholerae, and other bacteria with homologous periplasmic binding proteins.
Co-reporter:Aurélien Ducrot;Bethany Scattergood;Ben Coulson;Robin N. Perutz ;Anne-K. Duhme-Klair
European Journal of Inorganic Chemistry 2015 Volume 2015( Issue 21) pp:3562-3571
Publication Date(Web):
DOI:10.1002/ejic.201500059

Abstract

A series of six cis-dioxomolybdenum(VI) complexes with thiosemicarbazone ligands was synthesized and characterized. The ligands were obtained by reacting ethyl thiosemicarbazide with salicylaldehydes substituted with a selection of electron-withdrawing and electron-donating groups. The crystal structures, IR, NMR spectroscopic data and oxygen atom transfer activities of the complexes revealed that the electronic effects of the substituents located in the para-position of the phenolate donor are transmitted through to the molybdenum center, as reflected by linear relationships between Hammett constants and key properties of the complexes, including the molybdenum–phenolate bond lengths and the coordination shift of the imine proton resonance. Compared with the unsubstituted catalyst, electron-withdrawing substituents increase the rate of oxygen atom transfer from dimethyl sulfoxide to triphenylphosphine, whereas electron-donating groups have the opposite effect. The highest rate enhancement was achieved through the introduction of a strongly electron-withdrawing NO2 substituent in the p-position of the phenolate donor.

Co-reporter:Stephen J. Milner, Anna M. Snelling, Kevin G. Kerr, Ahmad Abd-El-Aziz, Gavin H. Thomas, Roderick E. Hubbard, Anne Routledge, Anne-Kathrin Duhme-Klair
Bioorganic & Medicinal Chemistry 2014 Volume 22(Issue 16) pp:4499-4505
Publication Date(Web):15 August 2014
DOI:10.1016/j.bmc.2014.04.009
A series of structurally related citric acid–ciprofloxacin conjugates was synthesised to investigate the influence of the linker between citric acid and ciprofloxacin on antibacterial activities. Minimum inhibitory concentrations (MICs) were determined against a panel of reference strains and clinical isolates of bacteria associated with infection in humans and correlated with the DNA gyrase inhibitory activity. The observed trend was rationalised by computational modelling.Citrate-functionalized ciprofloxacin conjugates have been synthesised. MICs determined against a panel of clinically relevant bacterial strains have been determined and correlated with DNA gyrase inhibitory activity. Computational modelling rationalised observed trend.
Co-reporter:Dr. Stephen J. Milner;Christopher T. Carrick; Kevin G. Kerr;Dr. Anna M. Snelling;Dr. Gavin H. Thomas;Dr. Anne-Kathrin Duhme-Klair;Dr. Anne Routledge
ChemBioChem 2014 Volume 15( Issue 3) pp:466-471
Publication Date(Web):
DOI:10.1002/cbic.201300512

Abstract

Mono- and disaccharide-functionalised conjugates of the fluoroquinolone antibiotic ciprofloxacin have been synthesised and used as chemical probes of the bacterial uptake of glycosylated ciprofloxacin. Their antimicrobial activities against a panel of clinically relevant bacteria were determined: the ability of these conjugates to inhibit their target DNA gyrase and to be transported into the bacteria was assessed by using in vivo and in vitro assays. The data suggest a lack of active uptake through sugar transporters and that although the addition of monosaccharides is compatible with the inhibition of DNA gyrase, the addition of a disaccharide results in a significant decrease in antimicrobial activity.

Co-reporter:Stephen J. Milner, Alexandra Seve, Anna M. Snelling, Gavin H. Thomas, Kevin G. Kerr, Anne Routledge and Anne-Kathrin Duhme-Klair  
Organic & Biomolecular Chemistry 2013 vol. 11(Issue 21) pp:3461-3468
Publication Date(Web):11 Apr 2013
DOI:10.1039/C3OB40162F
A series of fluoroquinolone conjugates was synthesised by linking the carboxylic acid functionality of the carboxylate-type siderophore staphyloferrin A and its derivatives to the piperazinyl nitrogen of ciprofloxacin and norfloxacin via amide bond formation. Four siderophore–drug conjugates were screened against a panel of bacteria associated with infection in humans. Whilst no activity was found against ciprofloxacin- or norfloxacin-resistant bacteria, one of the conjugates retained antibacterial activity against fluoroquinolone-susceptible strains although the structure of its lysine-based siderophore component differs from that of the natural siderophore staphyloferrin A. In contrast, three ornithine-based siderophore conjugates showed significantly reduced activity against strains that are susceptible to their respective parent fluoroquinolones, regardless of the type of fluoroquinolone attached or chirality at the ornithine Cα-atom. The loss of potency observed for the (R)- and (S)-ornithine-based ciprofloxacin conjugates correlates with their reduced inhibitory activity against the target enzyme DNA gyrase.
Co-reporter:Daniel J. Raines;Dr. Olga V. Moroz; Keith S. Wilson ;Dr. Anne-K. Duhme-Klair
Angewandte Chemie 2013 Volume 125( Issue 17) pp:4693-4696
Publication Date(Web):
DOI:10.1002/ange.201300751
Co-reporter:Daniel J. Raines;Dr. Olga V. Moroz; Keith S. Wilson ;Dr. Anne-K. Duhme-Klair
Angewandte Chemie International Edition 2013 Volume 52( Issue 17) pp:4595-4598
Publication Date(Web):
DOI:10.1002/anie.201300751
Co-reporter:Abeda Jamadar, Anne-K. Duhme-Klair, Kiranmayi Vemuri, Manjula Sritharan, Prasad Dandawate and Subhash Padhye  
Dalton Transactions 2012 vol. 41(Issue 30) pp:9192-9201
Publication Date(Web):18 May 2012
DOI:10.1039/C2DT30322A
A series of eight pyruvate-based aroylhydrazones was synthesised and characterised. The reaction of the sodium salts of the aroylhydrazones with one equivalent of copper(II) chloride allowed the isolation of neutral 1:1 complexes in which the hydrazones occupy three basal coordination sites of a square pyramidal Cu(II)-centre, with two solvent molecules completing the coordination sphere. Structural details were obtained through the determination of the crystal structures of two representative pyruvate-based aroylhydrazones and three Cu(II) complexes. The evaluation of the antimycobacterial activity of the sodium salts of the eight pryruvate hydrazones showed that the compounds are essentially inactive in their anionic form. The corresponding neutral Cu(II) complexes, however, exhibit promising antimycobacterial activities if tested under high iron (8 μg Fe per mL) conditions. As observed for the related antimycobacterial agent isoniazid, the activity of the complexes decreases if the M. tuberculosis cells are grown under low iron (0.02 μg Fe per mL) conditions. The Cu(II) complexes may thus have a similar mode of action and may require an iron-containing heme-dependent peroxidase for activation.
Co-reporter:Carmen E. Castillo, David L. Davies, Anne-K. Duhme Klair, Kuldip Singh and Shalini Singh  
Dalton Transactions 2012 vol. 41(Issue 2) pp:628-635
Publication Date(Web):24 Oct 2011
DOI:10.1039/C1DT11360G
Reactions of [Ir(C⁁N)2Cl]2 [HC⁁N = 2-(3-R-phenyl)pyridine, 2-(3-R-phenylpyrazole) R = H, Me] with Me2-phencat give luminescent complexes [Ir(C⁁N)2(Me2-phencat)][PF6] (Me2-2a, b, c)[PF6]. Deprotection of the methoxy groups with BBr3 is problematic as simultaneous bromination of the cyclometallated phenyl groups occurs. However, deprotection of Me2-phencat with BBr3 followed by complexation with [Ir(C⁁N)2Cl]2 gives luminescent complexes [Ir(C⁁N)2(H2-phencat)][PF6] (H2-3a, c)[PF6], which are luminescent sensors for molybdate.
Co-reporter:Catherine L. Davies, Anne-K. Duhme-Klair
Tetrahedron Letters 2011 Volume 52(Issue 35) pp:4515-4517
Publication Date(Web):31 August 2011
DOI:10.1016/j.tetlet.2011.06.094
The Tb(III)-complex of a cholesterol–DTPA conjugate was prepared in a one-step procedure from the tert-Butyl-protected form of the ligand through reaction with TbCl3.6H2O and NaI in refluxing acetonitrile. The acid-labile carbamate linker that connects the chelating DTPA moiety with the cholesterol unit of the ligand stays intact under these conditions. The combination of deprotection of the ligand with terbium complexation reduces the overall number of synthetic steps required and thus increases the efficiency and overall yield of the reaction sequence.
Co-reporter:Maria Leigh;Daniel J. Raines;Dr. Carmen E. Castillo;Dr. Anne K. Duhme-Klair
ChemMedChem 2011 Volume 6( Issue 6) pp:1107-1118
Publication Date(Web):
DOI:10.1002/cmdc.201100054

Abstract

Nonpurine xanthine oxidoreductase (XOR) inhibitors represent important alternatives to the purine analogue allopurinol, which is still the most widely used drug in the treatment of conditions associated with elevated uric acid levels in the blood. By condensing mono-, di- and trihydroxybenzaldehydes with aromatic thiosemicarbazides, aryl hydrazides and dithiocarbazates, three series of structurally related Schiff bases were synthesised, characterised and tested for XOR inhibitory activity. Hydroxy substitution in the para-position of the benzaldehyde component was found to confer high inhibitory activities. Acyl hydrazones were generally less potent than thiocarbonyl-containing Schiff bases. Within the thiosemicarbazone series, chloro and cyano substituents in the para-position of the thiosemicarbazide unit increased activities further, up to potencies approximately four-times higher than that of the benchmark allopurinol, as measured under the same assay conditions. In order to illustrate the potential of the Schiff bases to bind directly to the molybdenum centre in the active site of the enzyme, a representative example (H2L) of each inhibitor series was co-ordinated to a cis-dioxomolybdenum(VI) unit, and the resulting complexes, [MoO2(L)MeOH], were structurally characterised. Subsequent steady-state kinetic investigations, however, indicated mixed-type inhibition, similar to that observed for inhibitors known to bind within the substrate access channel of the enzyme, remote from the Mo centre. Enzyme co-crystallisation studies are thus required to determine the exact binding mode. Finally, the coordination of representative inhibitors to copper(II) gave rise to significantly decreased IC50 values, revealing an additive effect that merits further investigation.

Co-reporter:Maria Leigh;Dr. Carmen E. Castillo;Daniel J. Raines;Dr. Anne K. Duhme-Klair
ChemMedChem 2011 Volume 6( Issue 4) pp:612-616
Publication Date(Web):
DOI:10.1002/cmdc.201000429
Co-reporter:Stephen J. Milner, Alexandra Seve, Anna M. Snelling, Gavin H. Thomas, Kevin G. Kerr, Anne Routledge and Anne-Kathrin Duhme-Klair
Organic & Biomolecular Chemistry 2013 - vol. 11(Issue 21) pp:NaN3468-3468
Publication Date(Web):2013/04/11
DOI:10.1039/C3OB40162F
A series of fluoroquinolone conjugates was synthesised by linking the carboxylic acid functionality of the carboxylate-type siderophore staphyloferrin A and its derivatives to the piperazinyl nitrogen of ciprofloxacin and norfloxacin via amide bond formation. Four siderophore–drug conjugates were screened against a panel of bacteria associated with infection in humans. Whilst no activity was found against ciprofloxacin- or norfloxacin-resistant bacteria, one of the conjugates retained antibacterial activity against fluoroquinolone-susceptible strains although the structure of its lysine-based siderophore component differs from that of the natural siderophore staphyloferrin A. In contrast, three ornithine-based siderophore conjugates showed significantly reduced activity against strains that are susceptible to their respective parent fluoroquinolones, regardless of the type of fluoroquinolone attached or chirality at the ornithine Cα-atom. The loss of potency observed for the (R)- and (S)-ornithine-based ciprofloxacin conjugates correlates with their reduced inhibitory activity against the target enzyme DNA gyrase.
Co-reporter:Abeda Jamadar, Anne-K. Duhme-Klair, Kiranmayi Vemuri, Manjula Sritharan, Prasad Dandawate and Subhash Padhye
Dalton Transactions 2012 - vol. 41(Issue 30) pp:NaN9201-9201
Publication Date(Web):2012/05/18
DOI:10.1039/C2DT30322A
A series of eight pyruvate-based aroylhydrazones was synthesised and characterised. The reaction of the sodium salts of the aroylhydrazones with one equivalent of copper(II) chloride allowed the isolation of neutral 1:1 complexes in which the hydrazones occupy three basal coordination sites of a square pyramidal Cu(II)-centre, with two solvent molecules completing the coordination sphere. Structural details were obtained through the determination of the crystal structures of two representative pyruvate-based aroylhydrazones and three Cu(II) complexes. The evaluation of the antimycobacterial activity of the sodium salts of the eight pryruvate hydrazones showed that the compounds are essentially inactive in their anionic form. The corresponding neutral Cu(II) complexes, however, exhibit promising antimycobacterial activities if tested under high iron (8 μg Fe per mL) conditions. As observed for the related antimycobacterial agent isoniazid, the activity of the complexes decreases if the M. tuberculosis cells are grown under low iron (0.02 μg Fe per mL) conditions. The Cu(II) complexes may thus have a similar mode of action and may require an iron-containing heme-dependent peroxidase for activation.
Co-reporter:Carmen E. Castillo, David L. Davies, Anne-K. Duhme Klair, Kuldip Singh and Shalini Singh
Dalton Transactions 2012 - vol. 41(Issue 2) pp:NaN635-635
Publication Date(Web):2011/10/24
DOI:10.1039/C1DT11360G
Reactions of [Ir(C⁁N)2Cl]2 [HC⁁N = 2-(3-R-phenyl)pyridine, 2-(3-R-phenylpyrazole) R = H, Me] with Me2-phencat give luminescent complexes [Ir(C⁁N)2(Me2-phencat)][PF6] (Me2-2a, b, c)[PF6]. Deprotection of the methoxy groups with BBr3 is problematic as simultaneous bromination of the cyclometallated phenyl groups occurs. However, deprotection of Me2-phencat with BBr3 followed by complexation with [Ir(C⁁N)2Cl]2 gives luminescent complexes [Ir(C⁁N)2(H2-phencat)][PF6] (H2-3a, c)[PF6], which are luminescent sensors for molybdate.
2H-Pyran-2-one, 4-iodo-6-methyl-
2,5-DIAMINOPENTANOIC ACID
N~2~,N~6~-bis(2,3-dihydroxybenzoyl)-L-lysine
1,5-Dimethyl Citrate
2H-Pyran-2-one, 4-chloro-6-methyl-
3-hydroxy-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid
2H-1-Benzopyran-2-one, 4-(phenylethynyl)-
1,2,3-Propanetricarboxylic acid, 2-hydroxy-, dimethyl ester
2,3-BIS(PHENYLMETHOXY)BENZOIC ACID