Tadashi Honda

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Organization: Stony Brook University
Department: Department of Chemistry and Institute of Chemical Biology &
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Co-reporter:René V. Bensasson, Albena T. Dinkova-Kostova, Suqing Zheng, Akira Saito, Wei Li, Vincent Zoete, Tadashi Honda
Bioorganic & Medicinal Chemistry Letters 2016 Volume 26(Issue 17) pp:4345-4349
Publication Date(Web):1 September 2016
DOI:10.1016/j.bmcl.2016.07.028
Tricyclic, bicyclic, and monocyclic compounds containing cyanoenones induce various anti-inflammatory and cytoprotective enzymes through activation of the Keap1/Nrf2/ARE (antioxidant response element) pathway. The potency of these compounds as Nrf2 activators was determined using a prototypic cytoprotective enzyme NAD(P)H:quinone oxidoreductase 1 (NQO1) in Hepa1c1c7 murine hepatoma cells. The electron affinity (EA) of the compounds, expressed as the energy of their lowest unoccupied molecular orbital [E (LUMO)], was evaluated using two types of quantum mechanical calculations: the semiempirical (AM1) and the density functional theory (DFT) methods. We observed striking linear correlations [r = 0.897 (AM1) and 0.936 (DFT)] between NQO1 inducer potency of these compounds and their E (LUMO) regardless of the molecule size. Importantly and interestingly, this finding demonstrates that the EA is the essentially important factor that determines the reactivity of the cyanoenones with Keap1.
Co-reporter:Wei Li; Suqing Zheng; Maureen Higgins; Rocco P. MorraJr.; Anne T. Mendis; Chih-Wei Chien; Iwao Ojima; Dale F. Mierke; Albena T. Dinkova-Kostova
Journal of Medicinal Chemistry 2015 Volume 58(Issue 11) pp:4738-4748
Publication Date(Web):May 12, 2015
DOI:10.1021/acs.jmedchem.5b00393
A monocyclic compound 3 (3-ethynyl-3-methyl-6-oxocyclohexa-1,4-dienecarbonitrile) is a highly reactive Michael acceptor leading to reversible adducts with nucleophiles, which displays equal or greater potency than the pentacyclic triterpenoid CDDO in inflammation and carcinogenesis related assays. Recently, reversible covalent drugs, which bind with protein targets but not permanently, have been gaining attention because of their unique features. To explore such reversible covalent drugs, we have synthesized monocyclic, bicyclic, and tricyclic compounds containing 3 as an electrophilic fragment and evaluated them as activators of the Keap1/Nrf2/ARE pathway and inhibitors of iNOS. Notably, these compounds maintain the unique features of the chemical reactivity and biological potency of 3. Among them, a monocyclic compound 5 is the most potent in these assays while a tricyclic compound 14 displays a more robust and specific activation profile compared to 5. In conclusion, we demonstrate that 3 is a useful electrophilic fragment for exploring reversible covalent drugs.
Co-reporter:Suqing Zheng;Jeffrey T.-J. Huang;Elena V. Knatko;Sheila Sharp;Maureen Higgins;Iwao Ojima;Albena T. Dinkova-Kostova
Journal of Labelled Compounds and Radiopharmaceuticals 2014 Volume 57( Issue 10) pp:606-610
Publication Date(Web):
DOI:10.1002/jlcr.3230

Tricyclic bis(cyanoenone), TBE-31, one of the most potent activators of the Keap1/Nrf2/antioxidant response element pathway, has been developed as a new anti-inflammatory and cytoprotective agent. 13C215N2-labeled TBE-31 ([13C215N2]-TBE-31), which has two 13C and two 15N atoms in two cyano groups, was designed to develop a method for quantification of cell, tissue, and plasma levels of TBE-31 that involves chromatography/mass spectrometry coupled with the use of a stable isotope-labeled internal standard. [13C215N2]-TBE-31 was successfully synthesized in four steps from a previously reported intermediate, which is prepared in 11 steps from cyclohexanone, by introduction of two 13C atoms with ethyl [13C]formate and two 15N atoms with hydroxyl[15N]amine. The stable isotope dilution liquid chromatography–mass spectrometry method for quantification of TBE-31 was successfully developed using [13C215N2]-TBE-31 to compensate for any variables encountered during sample processing and analysis.

Co-reporter:Akira Saito, Maureen Higgins, Suqing Zheng, Wei Li, Iwao Ojima, Albena T. Dinkova-Kostova, Tadashi Honda
Bioorganic & Medicinal Chemistry Letters 2013 Volume 23(Issue 20) pp:5540-5543
Publication Date(Web):15 October 2013
DOI:10.1016/j.bmcl.2013.08.058
The tricycle 1 ((±)-(4bS,8aR,10aS))-10a-ethynyl-4b,8,8-trimethyl-3,7-dioxo-3,4b,7,8,8a,9,10,10a-octahydrophenanthrene-2,6-dicarbonitrile), a potent activator of the Keap1/Nrf2/ARE pathway, has the potential to be a first in class drug for the treatment of diabetic nephropathy. To identify the protein targets for the development of 1, the (1:1)-diasteromeric mixture of biotinylated tricycles 3a and 3b were designed and synthesized. For the synthesis of 3a and 3b, a new important precursor, hydroxylated tricycle (±)-16 was synthesized from 4 by a C1 α-methyl group oxidation protocol, which involves cyclopalladation of the C1 α-methyl group from a C2-oxime. For the induction of the phase 2 cytoprotective enzyme NQO1 in Hepa1c1c7 murine hepatoma cells, the diasteromeric mixture 3a and 3b shows high potency (CD, 75 nM) although this potency is lower than that of 1 and 16. Thus, biotinylated tricycles 3a and 3b may be promising tools for the isolation of the protein targets of 1.
Co-reporter:Suqing Zheng, Allison Chowdhury, Iwao Ojima, Tadashi Honda
Tetrahedron 2013 69(8) pp: 2052-2055
Publication Date(Web):
DOI:10.1016/j.tet.2012.12.079
Co-reporter:Suqing Zheng ; Y. R. Santosh Laxmi ; Emilie David ; Albena T. Dinkova-Kostova ; Katherine H. Shiavoni ; Yanqing Ren ; Ying Zheng ; Isaac Trevino ; Ronald Bumeister ; Iwao Ojima ; W. Christian Wigley ; James B. Bliska ; Dale F. Mierke
Journal of Medicinal Chemistry 2012 Volume 55(Issue 10) pp:4837-4846
Publication Date(Web):April 25, 2012
DOI:10.1021/jm3003922
Novel monocyclic cyanoenones examined to date display unique features regarding chemical reactivity as Michael acceptors and biological potency. Remarkably, in some biological assays, the simple structure is more potent than pentacyclic triterpenoids (e.g., CDDO and bardoxolone methyl) and tricycles (e.g., TBE-31). Among monocyclic cyanoenones, 1 is a highly reactive Michael acceptor with thiol nucleophiles. Furthermore, an important feature of 1 is that its Michael addition is reversible. For the inhibition of NO production, 1 shows the highest potency. Notably, its potency is about three times higher than CDDO, whose methyl ester (bardoxolone methyl) is presently in phase III clinical trials. For the induction of NQO1, 1 also demonstrated the highest potency. These results suggest that the reactivity of these Michael acceptors is closely related to their biological potency. Interestingly, in LPS-stimulated macrophages, 1 causes apoptosis and inhibits secretion of TNF-α and IL-1β with potencies that are higher than those of bardoxolone methyl and TBE-31.
Co-reporter:Tadashi Honda ; Hidenori Yoshizawa ; Chitra Sundararajan ; Emilie David ; Marc J. Lajoie ; Frank G. Favaloro ; Jr.; Tomasz Janosik ; Xiaobo Su ; Yukiko Honda ; Bill D. Roebuck ;Gordon W. Gribble
Journal of Medicinal Chemistry 2011 Volume 54(Issue 6) pp:1762-1778
Publication Date(Web):March 1, 2011
DOI:10.1021/jm101445p
Forty-four novel tricycles containing nonenolizable cyano enones (TCEs) were designed and synthesized on the basis of a semisynthetic pentacyclic triterpenoid, bardoxolone methyl, which is currently being developed in phase II clinical trials for the treatment of severe chronic kidney disease in diabetic patients. Most of the TCEs having two different kinds of nonenolizable cyano enones in rings A and C are highly potent suppressors of induction of inducible nitric oxide synthase stimulated with interferon-γ and are highly potent inducers of the cytoprotective enzymes heme oxygenase-1 and NAD(P)H:quinone oxidoreductase-1. Among these compounds, (±)-(4bS,8aR,10aS)-10a-ethynyl-4b,8,8-trimethyl-3,7-dioxo-3,4b,7,8,8a,9,10,10a-octahydrophenanthrene-2,6-dicarbonitrile ((±)-31) is the most potent in these bioassays in our pool of drug candidates including semisynthetic triterpenoids and synthetic tricycles. These facts strongly suggest that an essential factor for potency is not a triterpenoid skeleton but the cyano enone functionality. Notably, TCE 31 reduces hepatic tumorigenesis induced with aflatoxin in rats. Further preclinical studies and detailed mechanism studies on 31 are in progress.
Co-reporter:Tadashi Honda, Albena T. Dinkova-Kostova, Emilie David, Eric M. Padegimas, Chitra Sundararajan, Melean Visnick, Ron Bumeister, W. Christian Wigley
Bioorganic & Medicinal Chemistry Letters 2011 Volume 21(Issue 8) pp:2188-2191
Publication Date(Web):15 April 2011
DOI:10.1016/j.bmcl.2011.03.018
To explore more potent N-acylimidazole analogues of CDDO than CDDO-Im, which is one of the most potent compounds in several widely used bioassays related to protection against inflammation and carcinogenesis; we have synthesized and evaluated five new N-acyl(acetylenic)imidazole analogues. Among them, 4-ethynylimidazole 4 is nearly equivalent to CDDO-Im in potency in these bioassays. Remarkably, the solid form of 4 is more stable than that of CDDO-Im. These findings suggest that 4 is a very promising anti-inflammatory and cytoprotective agent and its further preclinical evaluation is warranted.1-[2-Cyano-3,12-dioxooleana-1,9(11)-dien-28-oyl]-4-ethynylimidazole is a novel semisynthetic triterpenoid whose potency is much higher than the lead compound, 2-cyano-3,12-dioxooleana-1,9(11)-dien-28-oic acid for inhibition of NO production stimulated with IFN-γ and for induction of the cytoprotective enzymes, NQO1 and HO-1.
8-Bromo-3,4-dihydronaphthalen-1(2H)-one
7-Amino-2,3-dihydroinden-1-one
(2,2-DIMETHYL-4H-1,3-DIOXIN-5-YL) TRIFLUOROMETHANESULFONATE
CYCLOPENTANECARBOXYLIC ACID, 3,3-DIMETHYL-2-OXO-, METHYL ESTER
N-(3-Oxo-2,3-dihydro-1H-inden-4-yl)acetamide
METHYL 2-OXO-1-(3-OXOBUTYL)CYCLOPENTANE-1-CARBOXYLATE
1-Naphthalenemethanol, 1,2,3,4-tetrahydro-1-methyl-
1-Naphthalenecarboxylic acid, 1,2,3,4-tetrahydro-, methyl ester
1-ISOPROPYL-6-OXO-1,6-DIHYDRO-3-PYRIDINECARBALDEHYDE