Torsten Linker

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Organization: University of Potsdam
Department: Department of Chemistry
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Co-reporter:Werner Fudickar and Torsten Linker
The Journal of Organic Chemistry September 1, 2017 Volume 82(Issue 17) pp:9258-9258
Publication Date(Web):July 31, 2017
DOI:10.1021/acs.joc.7b01765
The ortho, meta, and para isomers of 9,10-dipyridylanthracene 1 have been synthesized and converted into their endoperoxides 1-O2 upon oxidation with singlet oxygen. The kinetics of this reaction can be controlled by the substitution pattern and the solvent: in highly polar solvents, the meta isomer is the most reactive, whereas the ortho isomer is oxidized fastest in nonpolar solvents. Heating of the endoperoxides affords the parent anthracenes by release of singlet oxygen.
Co-reporter:Matthias Klaper; Werner Fudickar
Journal of the American Chemical Society 2016 Volume 138(Issue 22) pp:7024-7029
Publication Date(Web):May 17, 2016
DOI:10.1021/jacs.6b01555
Herein, we present a model system that allows the investigation of a directed intramolecular singlet oxygen (1O2) transfer. Furthermore, we show the influence of singlet oxygen lifetime and diffusion coefficient (D) on the preference of the intramolecular reaction over the intermolecular one in competition experiments. Finally, we demonstrate the distance dependence in quenching experiments, which enables us to draw conclusions about the role of singlet oxygen and 1O2 carriers in photodynamic therapy.
Co-reporter:M. Klaper, P. Wessig and T. Linker  
Chemical Communications 2016 vol. 52(Issue 6) pp:1210-1213
Publication Date(Web):20 Nov 2015
DOI:10.1039/C5CC08606J
Catalytic amounts of a weak base are sufficient to induce the decomposition of anthracene endoperoxides to anthraquinone. The mechanism has been elucidated by isolation of intermediates in combination with DFT calculations. The whole process is suitable for the convenient generation of hydrogen peroxide under very mild conditions.
Co-reporter:Prashant Pavashe, Elangovan Elamparuthi, Cornelia Hettrich, Heiko M. Möller, and Torsten Linker
The Journal of Organic Chemistry 2016 Volume 81(Issue 18) pp:8595-8603
Publication Date(Web):August 12, 2016
DOI:10.1021/acs.joc.6b00987
A convenient and general synthesis of 2-thiocarbohydrates via cerium ammonium nitrate oxidation of the thiocyanate ion is described. Radical addition to glycals proceeds with excellent regio- and good stereoselectivities in only one step, deprotection affords water-soluble 2-thio saccharides. Binding studies to Con A have been performed by isothermal titration calorimetry (ITC) and saturation transfer difference (STD) NMR spectroscopy. The 2-thiomannose derivative binds even stronger to Con A than the natural substrate, offering opportunities for new lectin or enzyme inhibitors.
Co-reporter:Matthias Klaper
Journal of the American Chemical Society 2015 Volume 137(Issue 43) pp:13744-13747
Publication Date(Web):October 16, 2015
DOI:10.1021/jacs.5b07848
The intramolecular transfer of energy (FRET) and electrons (Dexter) are of great interest for the scientific community and are well-understood. In contrast, the intramolecular transfer of singlet oxygen (1O2), a reactive and short-lived oxygen species, has until now been unknown. This process would be very interesting because 1O2 plays an important role in photodynamic therapy (PDT). Herein, we present the first successful intramolecular transfer of 1O2 from a donor to acceptor. Also, we found a dependence of conformation and temperature comparable with those of FRET. We provide several pieces of evidence for the intramolecular character of this transfer, including competition experiments. Our studies should be interesting not only from the theoretical and mechanistic point of view but also for the design of new 1O2 donors and applications in PDT.
Co-reporter:Dr. Sumaira Umbreen ;Dr. Torsten Linker
Chemistry - A European Journal 2015 Volume 21( Issue 20) pp:7340-7344
Publication Date(Web):
DOI:10.1002/chem.201406546

Abstract

Conformationally fixed carbohydrate analogues are promising small-molecule inhibitors for hydrolases like O-GlcNAcase (OGA); however, their synthesis usually requires many steps. Herein we describe cycloadditions of dichloroketene to various glycals and subsequent Beckmann rearrangements, which offer an easy and stereoselective entry to glycosamine derivatives in good yields. The reactions are applicable for hexoses, pentoses, and disaccharides, and transformations to the corresponding imidates proceed smoothly. First biological tests reveal that such imidates indeed inhibit human OGA.

Co-reporter:Dr. Sumaira Umbreen ;Dr. Torsten Linker
Chemistry - A European Journal 2015 Volume 21( Issue 20) pp:
Publication Date(Web):
DOI:10.1002/chem.201582061
Co-reporter:Dr. Matthias Klaper ;Dr. Torsten Linker
Chemistry - A European Journal 2015 Volume 21( Issue 23) pp:8569-8577
Publication Date(Web):
DOI:10.1002/chem.201500146

Abstract

Singlet oxygen donors are of current interest for medical applications, but suffer from a short half-life leading to low singlet oxygen yields and problems with storage. We have synthesized more than 25 new singlet oxygen donors based on differently substituted naphthalenes in only a few steps. The influence of functional groups on the reaction rate of the photooxygenations, thermolysis, half-life, and singlet oxygen yield has been thoroughly studied. We determined various thermodynamic data and compared them with density functional calculations. Interestingly, remarkable stabilities of functional groups during the photooxygenations and stabilizing effects for some endoperoxides during the thermolysis have been found. Furthermore, we give evidence for a partly concerted and partly stepwise thermolysis mechanism leading to singlet and triplet oxygen, respectively. Our results might be interesting for “dark oxygenations” and future applications in medicine.

Co-reporter:Dipl.-Chem. Matthias Klaper ;Dr. Torsten Linker
Angewandte Chemie 2013 Volume 125( Issue 45) pp:12112-12115
Publication Date(Web):
DOI:10.1002/ange.201304768
Co-reporter:Dipl.-Chem. Matthias Klaper ;Dr. Torsten Linker
Angewandte Chemie International Edition 2013 Volume 52( Issue 45) pp:11896-11899
Publication Date(Web):
DOI:10.1002/anie.201304768
Co-reporter:Werner Fudickar
Journal of the American Chemical Society 2012 Volume 134(Issue 36) pp:15071-15082
Publication Date(Web):August 13, 2012
DOI:10.1021/ja306056x
An experimental and computational study on the impact of functional groups on the oxidation stability of higher acenes is presented. We synthesized anthracenes, tetracenes, and pentacenes with various substituents at the periphery, identified their photooxygenation products, and measured the kinetics. Furthermore, the products obtained from thermolysis and the kinetics of the thermolysis are investigated. Density functional theory is applied in order to predict reaction energies, frontier molecular orbital interactions, and radical stabilization energies. The combined results allow us to describe the mechanisms of the oxidations and the subsequent thermolysis. We found that the alkynyl group not only enhances the oxidation stability of acenes but also protects the resulting endoperoxides from thermal decomposition. Additionally, such substituents increase the regioselectivity of the photooxygenation of tetracenes and pentacenes. For the first time, we oxidized alkynylpentacenes by using chemically generated singlet oxygen (1O2) without irradiation and identified a 6,13-endoperoxide as the sole regioisomer. The bimolecular rate constant of this oxidation amounts to only 1 × 105 s–1 M–1. This unexpectedly slow reaction is a result of a physical deactivation of 1O2. In contrast to unsubstituted or aryl-substituted acenes, photooxygenation of alkynyl-substituted acenes proceeds most likely by a concerted mechanism, while the thermolysis is well explained by the formation of radical intermediates. Our results should be important for the future design of oxidation stable acene-based semiconductors.
Co-reporter:Jian Yin and Torsten Linker  
Organic & Biomolecular Chemistry 2012 vol. 10(Issue 12) pp:2351-2362
Publication Date(Web):20 Dec 2011
DOI:10.1039/C2OB06529K
C-branched carbohydrates are of current interest for glycochemistry, are widely found in nature and serve as important subunits in many antibiotics, bacterial polysaccharides and macrolides. Among C-functionalized saccharides, 2-C-branched carbohydrates represent challenging structures for synthetic chemists, since in contrast to C-glycosides they are not easily accessible from glycosyl bromides or other simple precursors. In this perspective we want to summarize recent approaches to 2-C-branched carbohydrates over the past fifteen years. The two main strategies are based on ring-opening of 1,2-cyclopropanated carbohydrates by various reagents, as well as radical additions to glycals and further transformations, developed in our group. Both methods are characterized by high stereoselectivities and good yields and give access to a broad variety of functionalized carbohydrate 2-C-analogs.
Co-reporter:Tukaram M. Pimpalpalle, Jian Yin and Torsten Linker  
Organic & Biomolecular Chemistry 2012 vol. 10(Issue 1) pp:103-109
Publication Date(Web):01 Sep 2011
DOI:10.1039/C1OB06370G
Barton esters have been introduced into the side chain of carbohydrates with high yields in only a few steps from easily available glycals. Their radical reactions afford 2-C-methyl and 2-C-bromomethyl hexoses, pentoses and disaccharides in good yields in analytically pure form. Since the Barton esters have been synthesized by an oxidative radical addition and their transformations by reductive radical processes, our results demonstrate the power of such reactions in carbohydrate chemistry.
Co-reporter:Andrea Bramborg
European Journal of Organic Chemistry 2012 Volume 2012( Issue 28) pp:5552-5563
Publication Date(Web):
DOI:10.1002/ejoc.201200823

Abstract

A strategy for the regioselective alkylation of arenes was developed, starting from commercially available and inexpensive terephthalic acid or naphthalene-1,4-dicarboxylic acid. The method entails a formal ipso-substitution of the carboxylate groups by a sequence of reductive alkylation under Birch conditions and subsequent acid-mediated rearomatization with loss of carbon monoxide and carbon dioxide. More than 20 different arenes with various side-chains were synthesized. With naphthalene-1,4-dicarboxylic acid as starting material, we were able to control the degree of alkylation by choosing the appropriate electrophile in the Birch reduction. Thus, bisalkylated naphthalenes and naphthoic acids became available chemoselectively. All reactions afforded a single regioisomer exclusively in high yields. Overall, aromatic dicarboxylic acids are suitable substrates for a two-step ipso-substitution that allows the selective synthesis of alkylated benzenes and naphthalenes.

Co-reporter:Tukaram M. Pimpalpalle, Srinivasa Rao Vidadala, Srinivas Hotha and Torsten Linker  
Chemical Communications 2011 vol. 47(Issue 37) pp:10434-10436
Publication Date(Web):11 Aug 2011
DOI:10.1039/C1CC13425F
Gold(III) bromide is a suitable catalyst for the stereoselective cyclization of 2-C-malonyl carbohydrates to the anomeric center under retention of one ester group. Reopening of the lactones with alcohols in the presence of TMSOTf affords allyl, propargyl and benzyl glycosides with high α-selectivity.
Co-reporter:Srinivasa Rao Vidadala;Tukaram M. Pimpalpalle;Srinivas Hotha
European Journal of Organic Chemistry 2011 Volume 2011( Issue 13) pp:2426-2430
Publication Date(Web):
DOI:10.1002/ejoc.201100134

Abstract

2-C-branched methyl glycosides react with various alcohols under gold catalysis to transglycosylated products. The method is applicable for the convenient synthesis of disaccharides. Without nucleophile a selective anomerization occurs, giving first access to α-configured 2-C-nitromethyl glycosides. The results are interesting for the mechanism of gold-catalyzed glycosidations.

Co-reporter:Dr. Werner Fudickar ;Dr. Torsten Linker
Chemistry - A European Journal 2011 Volume 17( Issue 49) pp:13661-13664
Publication Date(Web):
DOI:10.1002/chem.201102230
Co-reporter:Jian Yin, Torsten Linker
Tetrahedron 2011 67(13) pp: 2447-2461
Publication Date(Web):
DOI:10.1016/j.tet.2011.01.069
Co-reporter:Andrea Bramborg
Advanced Synthesis & Catalysis 2010 Volume 352( Issue 13) pp:2195-2199
Publication Date(Web):
DOI:10.1002/adsc.201000322

Abstract

Terephthalic acid reacts with alkyl halides under Birch conditions to substituted 1,4-cyclohexadienes in high yields and good stereoselectivities. Electrophiles containing ester or nitrile groups undergo a surprising fragmentation under the reaction conditions. Subsequent treatment with chlorosulfonic acid proceeds by an interesting tandem decarbonylation/decarboxylation, affording 1,4-dialkylbenzenes in excellent regioselectivity. Thus our new method is superior to classical Friedel–Crafts alkylations.

Co-reporter:Werner Fudickar and Torsten Linker
Langmuir 2010 Volume 26(Issue 6) pp:4421-4428
Publication Date(Web):January 7, 2010
DOI:10.1021/la904299n
Herein we demonstrate how the photoreaction between anthracenes and singlet oxygen (1O2) is employed for applications either as photoswitch or as photoresist. Thin films of the diaryl−alkyl anthracene 1 and the analogous oligomeric species 2 were irradiated under photomasks to generate pattern structures composed of 1/1-O2 and 2/2-O2. Kelvin probe force microscopy (KPFM) provided a powerful and nondestructive method to image the pattern information. The following studies based on AFM, KPFM and contact angle measurements unfold that the two species 1 and 2 underwent different progressions after the imaging step. Degrading is observed for the monomeric compound 1 and the pattern eventually becomes recognizable in topography. In the oxidized state (1-O2) the monomeric species remains physically stable. In consequence, the unreacted portion is removable and the remaining oxygenated form 1-O2 is sufficiently stable to protect an underlying substrate (e.g., silver) from etching. Thus, the system 1/1-O2 operates as photoresist. On the other hand, both states of the oligomer 2 remain stable. The film is stable up to temperatures >120 °C required to erase the pattern within acceptable time by cycloreversion. Anthracene 2 therefore acts as erasable and rewritable photochromic switch. The different behavior between 1 and 2 is explained by phase transitions which cause crystallization and finally ablation. Such transitions affect only the monomeric system 1/1-O2 and not the oligomeric system 2/2-O2. In conclusion, we designed two very similar materials based on diarylanthracenes, which can act either as a photoresist or as a rewritable photochromic switch.
Co-reporter:Jian Yin and Torsten Linker  
Organic & Biomolecular Chemistry 2009 vol. 7(Issue 23) pp:4829-4831
Publication Date(Web):05 Oct 2009
DOI:10.1039/B918893M
Both diastereomers of 2-C-branched carbohydrates with various functional groups are selectively available from the same malonate precursor in good yields in only a few steps.
Co-reporter:Tobias Krüger;Katja Vorndran Dr. Dr.
Chemistry - A European Journal 2009 Volume 15( Issue 44) pp:12082-12091
Publication Date(Web):
DOI:10.1002/chem.200901774

Abstract

Arenes with various alkyl side-chains were synthesized in high yields and excellent regioselectivities. Starting from toluic and naphthoic acids, the carboxylate group was conveniently substituted by alkyl halides by Birch reduction and subsequent decarbonylation. The method is characterized by inexpensive starting materials and reagents, and methylation of arenes was realized. Besides simple alkyl substituents, the scope of arene functionalization was extended by benzyl, fluoro, amino, and ester groups. We were able to control the alkylation of 1-naphthoic acid during Birch reduction by the addition of tert-butanol. This allowed the regioselective synthesis of mono and bis-substituted naphthalenes from the same starting material.

Co-reporter:Tukaram M. Pimpalpalle, Jian Yin and Torsten Linker
Organic & Biomolecular Chemistry 2012 - vol. 10(Issue 1) pp:NaN109-109
Publication Date(Web):2011/09/01
DOI:10.1039/C1OB06370G
Barton esters have been introduced into the side chain of carbohydrates with high yields in only a few steps from easily available glycals. Their radical reactions afford 2-C-methyl and 2-C-bromomethyl hexoses, pentoses and disaccharides in good yields in analytically pure form. Since the Barton esters have been synthesized by an oxidative radical addition and their transformations by reductive radical processes, our results demonstrate the power of such reactions in carbohydrate chemistry.
Co-reporter:Jian Yin and Torsten Linker
Organic & Biomolecular Chemistry 2009 - vol. 7(Issue 23) pp:NaN4831-4831
Publication Date(Web):2009/10/05
DOI:10.1039/B918893M
Both diastereomers of 2-C-branched carbohydrates with various functional groups are selectively available from the same malonate precursor in good yields in only a few steps.
Co-reporter:Tukaram M. Pimpalpalle, Srinivasa Rao Vidadala, Srinivas Hotha and Torsten Linker
Chemical Communications 2011 - vol. 47(Issue 37) pp:NaN10436-10436
Publication Date(Web):2011/08/11
DOI:10.1039/C1CC13425F
Gold(III) bromide is a suitable catalyst for the stereoselective cyclization of 2-C-malonyl carbohydrates to the anomeric center under retention of one ester group. Reopening of the lactones with alcohols in the presence of TMSOTf affords allyl, propargyl and benzyl glycosides with high α-selectivity.
Co-reporter:M. Klaper, P. Wessig and T. Linker
Chemical Communications 2016 - vol. 52(Issue 6) pp:NaN1213-1213
Publication Date(Web):2015/11/20
DOI:10.1039/C5CC08606J
Catalytic amounts of a weak base are sufficient to induce the decomposition of anthracene endoperoxides to anthraquinone. The mechanism has been elucidated by isolation of intermediates in combination with DFT calculations. The whole process is suitable for the convenient generation of hydrogen peroxide under very mild conditions.
Co-reporter:Jian Yin and Torsten Linker
Organic & Biomolecular Chemistry 2012 - vol. 10(Issue 12) pp:NaN2362-2362
Publication Date(Web):2011/12/20
DOI:10.1039/C2OB06529K
C-branched carbohydrates are of current interest for glycochemistry, are widely found in nature and serve as important subunits in many antibiotics, bacterial polysaccharides and macrolides. Among C-functionalized saccharides, 2-C-branched carbohydrates represent challenging structures for synthetic chemists, since in contrast to C-glycosides they are not easily accessible from glycosyl bromides or other simple precursors. In this perspective we want to summarize recent approaches to 2-C-branched carbohydrates over the past fifteen years. The two main strategies are based on ring-opening of 1,2-cyclopropanated carbohydrates by various reagents, as well as radical additions to glycals and further transformations, developed in our group. Both methods are characterized by high stereoselectivities and good yields and give access to a broad variety of functionalized carbohydrate 2-C-analogs.
2-OCTENE, 8-BROMO-2-METHYL-
Phenol, 4-(9-anthracenyl)-
Benzene, [(4-methyl-3-pentenyl)oxy]-
Phenol, 4-(10,15,20-triphenyl-21H,23H-porphin-5-yl)-
D-arabino-Hex-5-enitol,2,6-anhydro-5-deoxy-1,3,4-tris-O-(phenylmethyl)-
Naphthalene, 2-ethyl-1,4-dimethyl-
[(2R,3S,4R)-4-acetyloxy-3-[(2R,3R,4S,5R,6R)-3,4,5-triacetyloxy-6-(acetyloxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-2-yl]methyl acetate
2-HEPTENE, 7-BROMO-2-METHYL-