David R. Carbery

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Organization: University of Bath , England
Department: Department of Chemistry
Title: (PhD)

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Co-reporter:Alexander T. Murray, Jonathan D. Challinor, Christina E. Gulácsy, Cristina Lujan, Lauren E. Hatcher, Christopher R. Pudney, Paul R. Raithby, Matthew P. John and David R. Carbery  
Organic & Biomolecular Chemistry 2016 vol. 14(Issue 15) pp:3787-3792
Publication Date(Web):15 Mar 2016
DOI:10.1039/C6OB00361C
The formation and chemistry of flavin–indole charge transfer (CT) complexes has been studied using a model cationic flavin. The ability to form a CT complex is sensitive to indole structure as gauged by spectroscopic, kinetics and crystallographic studies. Single crystals of sufficient quality of a flavin–indole CT complex, suitable for X-ray diffraction, have been grown, allowing solid-state structural analysis. When CT complex formation is conducted in d4-methanol, an efficient and synthetically useful C-3 indole deuteration is observed.
Co-reporter:Alexer T. Murray;Rose King;Joseph V. G. Donnelly;Myles J. H. Dowley;Dr. Floriana Tuna;Daniel Sells;Dr. Matthew P. John;Dr. David R. Carbery
ChemCatChem 2016 Volume 8( Issue 3) pp:510-514
Publication Date(Web):
DOI:10.1002/cctc.201501153

Abstract

A new oxidation reaction based on two simple catalysts, namely, alloxan and a CuI salt, is highly effective for the aerobic oxidation and oxidative cross-coupling of amines. The reaction is operationally simple, reaction atmospheres enriched in dioxygen are obviated, and neither catalyst component requires prior synthesis. Mechanistic investigations have been performed and point towards a complex reaction manifold with evidence that supports a catalytic cycle that does not proceed through a quinone-imine step. Additionally, this dual catalyst system is efficient to effect diimide-mediated hydrogenation reactions of alkenes and alkynes, a transformation that has not been reported previously in the context of quinone catalyst systems.

Co-reporter:Alexer T. Murray;Myles J. H. Dowley;Dr. Fabienne Pradaux-Caggiano;Dr. Amgalanbaatar Baldansuren;Dr. Alistair J. Fielding;Dr. Floriana Tuna;Christopher H. Hendon; Aron Walsh; Guy C. Lloyd-Jones;Dr. Matthew P. John;Dr. David R. Carbery
Angewandte Chemie 2015 Volume 127( Issue 31) pp:9125-9128
Publication Date(Web):
DOI:10.1002/ange.201503654

Abstract

The flavoenzyme monoamine oxidase (MAO) regulates mammalian behavioral patterns by modulating neurotransmitters such as adrenaline and serotonin. The mechanistic basis which underpins this enzyme is far from agreed upon. Reported herein is that the combination of a synthetic flavin and alloxan generates a catalyst system which facilitates biomimetic amine oxidation. Mechanistic and electron paramagnetic (EPR) spectroscopic data supports the conclusion that the reaction proceeds through a radical manifold. This data provides the first example of a biorelevant synthetic model for monoamine oxidase B activity.

Co-reporter:Alexer T. Murray;Myles J. H. Dowley;Dr. Fabienne Pradaux-Caggiano;Dr. Amgalanbaatar Baldansuren;Dr. Alistair J. Fielding;Dr. Floriana Tuna;Christopher H. Hendon; Aron Walsh; Guy C. Lloyd-Jones;Dr. Matthew P. John;Dr. David R. Carbery
Angewandte Chemie International Edition 2015 Volume 54( Issue 31) pp:8997-9000
Publication Date(Web):
DOI:10.1002/anie.201503654

Abstract

The flavoenzyme monoamine oxidase (MAO) regulates mammalian behavioral patterns by modulating neurotransmitters such as adrenaline and serotonin. The mechanistic basis which underpins this enzyme is far from agreed upon. Reported herein is that the combination of a synthetic flavin and alloxan generates a catalyst system which facilitates biomimetic amine oxidation. Mechanistic and electron paramagnetic (EPR) spectroscopic data supports the conclusion that the reaction proceeds through a radical manifold. This data provides the first example of a biorelevant synthetic model for monoamine oxidase B activity.

Co-reporter:Christopher H. Hendon, David R. Carbery and Aron Walsh  
Chemical Science 2014 vol. 5(Issue 4) pp:1390-1395
Publication Date(Web):20 Jan 2014
DOI:10.1039/C3SC53432D
Electronic communication in biological systems is fundamental to understanding protein signalling and electron hopping pathways. Frequently studied examples are cationic radical methionine and its functional derivatives. These systems are understood to be stabilised by a direct ‘three-electron two-centred’ bond. We demonstrate for methionine and a series of cationic radical methionine analogues that long-range multi-centred indirect stabilisation occurs, which cannot be attributed to three-electron two-centred interactions. A revised description of the radical stabilisation process is presented, which includes contributions from all atoms with accessible p-orbitals, independent of the distance to the sulfur radical.
Co-reporter:Dr. Antoine Buchard;Dr. David R. Carbery; Matthew G. Davidson;Dr. Petya K. Ivanova;Dr. Ben J. Jeffery;Dr. Gabriele I. Kociok-Köhn ;Dr. John P. Lowe
Angewandte Chemie 2014 Volume 126( Issue 50) pp:14078-14081
Publication Date(Web):
DOI:10.1002/ange.201407525

Abstract

Poly(mandelic acid) (PMA) is an aryl analogue of poly(lactic acid) (PLA) and a biodegradable analogue of polystyrene. The preparation of stereoregular PMA was realized using a pyridine/mandelic acid adduct (Py⋅MA) as an organocatalyst for the ring-opening polymerization (ROP) of the cyclic O-carboxyanhydride (manOCA). Polymers with a narrow polydispersity index and excellent molecular-weight control were prepared at ambient temperature. These highly isotactic chiral polymers exhibit an enhancement of the glass-transition temperature (Tg) of 15 °C compared to the racemic polymer, suggesting potential future application as high-performance commodity and biomedical materials.

Co-reporter:Dr. Antoine Buchard;Dr. David R. Carbery; Matthew G. Davidson;Dr. Petya K. Ivanova;Dr. Ben J. Jeffery;Dr. Gabriele I. Kociok-Köhn ;Dr. John P. Lowe
Angewandte Chemie International Edition 2014 Volume 53( Issue 50) pp:13858-13861
Publication Date(Web):
DOI:10.1002/anie.201407525

Abstract

Poly(mandelic acid) (PMA) is an aryl analogue of poly(lactic acid) (PLA) and a biodegradable analogue of polystyrene. The preparation of stereoregular PMA was realized using a pyridine/mandelic acid adduct (Py⋅MA) as an organocatalyst for the ring-opening polymerization (ROP) of the cyclic O-carboxyanhydride (manOCA). Polymers with a narrow polydispersity index and excellent molecular-weight control were prepared at ambient temperature. These highly isotactic chiral polymers exhibit an enhancement of the glass-transition temperature (Tg) of 15 °C compared to the racemic polymer, suggesting potential future application as high-performance commodity and biomedical materials.

Co-reporter:Stephen J. Heffernan, James M. Beddoes, Mary F. Mahon, Alan J. Hennessy and David R. Carbery  
Chemical Communications 2013 vol. 49(Issue 23) pp:2314-2316
Publication Date(Web):07 Feb 2013
DOI:10.1039/C3CC00273J
The Au(I)-catalysed rearrangement of propargylic esters formed from an ynamide has been studied. The reaction is facile, and when conducted in the presence of a reactive indole nucleophile, leads to a cascade process whereby γ-indolyl α-acyloxyenamides are formed in good yield and excellent E-stereoselectivity.
Co-reporter:Stephen J. Heffernan;James P. Tellam;Marine E. Queru;Andrew C. Silvanus;David Benito;Mary F. Mahon;Alan J. Hennessy;Benjamin I. Andrews
Advanced Synthesis & Catalysis 2013 Volume 355( Issue 6) pp:1149-1159
Publication Date(Web):
DOI:10.1002/adsc.201300018

Abstract

The gold-catalysed double functionalisation of indoles is presented. Enynones are used to annulate indoles via a double sodium tetrachloroaurate-catalysed process involving a mixture of CH activation and alkyne activation modes of promotion. Good yields for the formation of medicinally relevant [6,5,7]-tricyclic indoles are realised.

Co-reporter:Nathan W. G. Fairhurst, Mary F. Mahon, Rachel H. Munday, and David R. Carbery
Organic Letters 2012 Volume 14(Issue 3) pp:756-759
Publication Date(Web):January 12, 2012
DOI:10.1021/ol203300k
The Ireland–Claisen [3,3]-sigmatropic rearrangement has been used to access biologically important β,β′-dihydroxy α-amino acids. The rearrangement reported is highly stereoselective and offers excellent levels of remote stereocontrol. This strategy has been used to synthesize the natural immunosuppressant mycestericin G and ent-mycestericin G, allowing for a revision of absolute configuration of this natural product.
Co-reporter:Alexander T. Murray, Pascal Matton, Nathan W. G. Fairhurst, Matthew P. John, and David R. Carbery
Organic Letters 2012 Volume 14(Issue 14) pp:3656-3659
Publication Date(Web):July 11, 2012
DOI:10.1021/ol301496m
The oxidation of alkyl and aryl aldehydes to their corresponding carboxylic acids has been achieved through the action of a biomimetic bridged flavin catalyst. The reaction uses readily available 35% aqueous hydrogen peroxide and is operationally simple. The oxidation is a green and sustainable reaction, obviating chlorinated solvents with minimal byproducts.
Co-reporter:Matthew R. Crittall, Nathan W. G. Fairhurst and David R. Carbery  
Chemical Communications 2012 vol. 48(Issue 91) pp:11181-11183
Publication Date(Web):24 Aug 2012
DOI:10.1039/C2CC35583C
The synthesis of a second-generation [6]-helicenoidal DMAP organocatalyst is reported. The synthesis is reliant upon a highly diastereoselective Rh-catalysed [2 + 2 + 2] triyne cycloisomerization, using an existing stereocentre to control the sense of forming helicity. Taken together, a scalable (>1 g), resolution-free entry to a helical DMAP with the capacity for subsequent functionalization, has been achieved.
Co-reporter:Wesley R. R. Harker, Emma L. Carswell and David R. Carbery  
Organic & Biomolecular Chemistry 2012 vol. 10(Issue 7) pp:1406-1410
Publication Date(Web):04 Jan 2012
DOI:10.1039/C2OB06853B
α-Alkyl β-amino esters are available in high diastereoselectivity through a silicon-free Claisen enolate [3,3]-sigmatropic rearrangement of enamide esters. Optimisation studies have probed the crucial role of the initial enolisation and the nature of the enamide N-centre. The demonstration of chirality transfer and the formation of β-proline systems, is also presented.
Co-reporter:Stephen J. Heffernan, David R. Carbery
Tetrahedron Letters 2012 Volume 53(Issue 38) pp:5180-5182
Publication Date(Web):19 September 2012
DOI:10.1016/j.tetlet.2012.07.088
The Ireland–Claisen rearrangement of propargyl ynamido ester substrates is reported. The expected allenamide carboxylic acid products from [3,3]-sigmatropic rearrangement are not isolated, with 2-amidodienes alternatively formed in good yield with high levels of stereocontrol after decarboxylation.
Co-reporter:Matthew R. Crittall, Henry S. Rzepa, and David R. Carbery
Organic Letters 2011 Volume 13(Issue 5) pp:1250-1253
Publication Date(Web):February 8, 2011
DOI:10.1021/ol2001705
The design, synthesis, and study of a helical dialkylaminopyridine Lewis base catalyst is reported. Helical DMAP analogue 4 is based upon a helicenoid structure and displays good to excellent levels of selectivity (S ≤ 116) in the kinetic resolution of chiral secondary alcohols. Catalyst 4 displays excellent reactivity with exceptionally low loadings of 0.05 mol % effecting practical levels of selectivity in kinetic resolutions.
Co-reporter:Barrie J. Marsh, Emma L. Heath and David R. Carbery  
Chemical Communications 2011 vol. 47(Issue 1) pp:280-282
Publication Date(Web):16 Aug 2010
DOI:10.1039/C0CC02272A
Bridged flavinium organocatalysts have displayed efficacy in the diimide mediated reduction of enamides in aqueous conditions. This represents the first diimide reduction of an electron rich alkene and offers a clean alternative to the use of alkylating agents for N-alkylation.
Co-reporter:James P. Tellam, David R. Carbery
Tetrahedron Letters 2011 Volume 52(Issue 45) pp:6027-6029
Publication Date(Web):9 November 2011
DOI:10.1016/j.tetlet.2011.09.011
The Ireland-Claisen [3,3]-sigmatropic rearrangement of an allylic glycinate bearing a remote chiral enol ether has been studied. Remote exopericyclic stereocontrol is achievable in this instance. The product from this rearrangement has been progressed through a formal total synthesis of the natural antibiotic, furanomycin.
Co-reporter:Wesley R. R. Harker, Emma L. Carswell and David R. Carbery
Organic Letters 2010 Volume 12(Issue 16) pp:3712-3715
Publication Date(Web):July 29, 2010
DOI:10.1021/ol101580y
The E/Z-selectivity in the formation of silylketene acetals derived from phenylacetate esters, mediated by LiHMDS, has been studied by in situ NMR techniques. The formation is seen to be highly E-selective with use of the newly developed protocol. Isolated aryl-substituted silylketene acetals are now attainable with high levels of E-geometrical purity in excellent yield.
Co-reporter:Barrie J. Marsh, David R. Carbery
Tetrahedron Letters 2010 Volume 51(Issue 17) pp:2362-2365
Publication Date(Web):28 April 2010
DOI:10.1016/j.tetlet.2010.02.164
The chemoselective oxidation of sulfides to sulfoxides, catalysed by bridged, tetracyclic flavinium catalysts is presented. The flavinium catalysts are easily prepared via a telescoped three-step process. A range of sulfoxides is accessed in excellent yield and chemoselectivity.The chemoselective oxidation of sulfides to sulfoxides, catalysed by bridged, tetracyclic flavinium catalysts is presented. The flavinium catalysts are easily prepared via a telescoped three-step process. A range of sulfoxides is accessed in excellent yield and chemoselectivity.
Co-reporter:Andrew C. Silvanus, Benjamin J. Groombridge, Benjamin I. Andrews, Gabriele Kociok-Köhn, and David R. Carbery
The Journal of Organic Chemistry 2010 Volume 75(Issue 21) pp:7491-7493
Publication Date(Web):October 13, 2010
DOI:10.1021/jo101713d
Functionalized cyclohexanones are formed in excellent yield and diastereoselectivity from a phase transfer catalyzed double addition of active methylene pronucleophiles to nonsymmetrical divinyl ketones.
Co-reporter:Barrie J. Marsh and David R. Carbery
The Journal of Organic Chemistry 2009 Volume 74(Issue 8) pp:3186-3188
Publication Date(Web):March 23, 2009
DOI:10.1021/jo900237y
A one-pot protocol for the formation of 2-nitrobenzenesulfonylhydrazide (NBSH) from commercial reagents and subsequent alkene reduction is presented. The transformation is operationally simple and generally efficient for effecting diimide alkene reductions. A range of 16 substrates have been reduced, highlighting the unique chemoselectivity of diimide as a reduction system.
Co-reporter:Stephen J. Heffernan, James M. Beddoes, Mary F. Mahon, Alan J. Hennessy and David R. Carbery
Chemical Communications 2013 - vol. 49(Issue 23) pp:NaN2316-2316
Publication Date(Web):2013/02/07
DOI:10.1039/C3CC00273J
The Au(I)-catalysed rearrangement of propargylic esters formed from an ynamide has been studied. The reaction is facile, and when conducted in the presence of a reactive indole nucleophile, leads to a cascade process whereby γ-indolyl α-acyloxyenamides are formed in good yield and excellent E-stereoselectivity.
Co-reporter:Matthew R. Crittall, Nathan W. G. Fairhurst and David R. Carbery
Chemical Communications 2012 - vol. 48(Issue 91) pp:NaN11183-11183
Publication Date(Web):2012/08/24
DOI:10.1039/C2CC35583C
The synthesis of a second-generation [6]-helicenoidal DMAP organocatalyst is reported. The synthesis is reliant upon a highly diastereoselective Rh-catalysed [2 + 2 + 2] triyne cycloisomerization, using an existing stereocentre to control the sense of forming helicity. Taken together, a scalable (>1 g), resolution-free entry to a helical DMAP with the capacity for subsequent functionalization, has been achieved.
Co-reporter:Christopher H. Hendon, David R. Carbery and Aron Walsh
Chemical Science (2010-Present) 2014 - vol. 5(Issue 4) pp:NaN1395-1395
Publication Date(Web):2014/01/20
DOI:10.1039/C3SC53432D
Electronic communication in biological systems is fundamental to understanding protein signalling and electron hopping pathways. Frequently studied examples are cationic radical methionine and its functional derivatives. These systems are understood to be stabilised by a direct ‘three-electron two-centred’ bond. We demonstrate for methionine and a series of cationic radical methionine analogues that long-range multi-centred indirect stabilisation occurs, which cannot be attributed to three-electron two-centred interactions. A revised description of the radical stabilisation process is presented, which includes contributions from all atoms with accessible p-orbitals, independent of the distance to the sulfur radical.
Co-reporter:Barrie J. Marsh, Emma L. Heath and David R. Carbery
Chemical Communications 2011 - vol. 47(Issue 1) pp:NaN282-282
Publication Date(Web):2010/08/16
DOI:10.1039/C0CC02272A
Bridged flavinium organocatalysts have displayed efficacy in the diimide mediated reduction of enamides in aqueous conditions. This represents the first diimide reduction of an electron rich alkene and offers a clean alternative to the use of alkylating agents for N-alkylation.
Co-reporter:Wesley R. R. Harker, Emma L. Carswell and David R. Carbery
Organic & Biomolecular Chemistry 2012 - vol. 10(Issue 7) pp:NaN1410-1410
Publication Date(Web):2012/01/04
DOI:10.1039/C2OB06853B
α-Alkyl β-amino esters are available in high diastereoselectivity through a silicon-free Claisen enolate [3,3]-sigmatropic rearrangement of enamide esters. Optimisation studies have probed the crucial role of the initial enolisation and the nature of the enamide N-centre. The demonstration of chirality transfer and the formation of β-proline systems, is also presented.
Co-reporter:Alexander T. Murray, Jonathan D. Challinor, Christina E. Gulácsy, Cristina Lujan, Lauren E. Hatcher, Christopher R. Pudney, Paul R. Raithby, Matthew P. John and David R. Carbery
Organic & Biomolecular Chemistry 2016 - vol. 14(Issue 15) pp:NaN3792-3792
Publication Date(Web):2016/03/15
DOI:10.1039/C6OB00361C
The formation and chemistry of flavin–indole charge transfer (CT) complexes has been studied using a model cationic flavin. The ability to form a CT complex is sensitive to indole structure as gauged by spectroscopic, kinetics and crystallographic studies. Single crystals of sufficient quality of a flavin–indole CT complex, suitable for X-ray diffraction, have been grown, allowing solid-state structural analysis. When CT complex formation is conducted in d4-methanol, an efficient and synthetically useful C-3 indole deuteration is observed.
Co-reporter:David R. Carbery
Organic & Biomolecular Chemistry 2008 - vol. 6(Issue 19) pp:NaN3460-3460
Publication Date(Web):2008/08/05
DOI:10.1039/B809319A
Enamides display a fine balance of stability and reactivity, which is now leading to their increasing use in organic synthesis. Enamides offer multiple opportunities for the inclusion of nitrogen based functionality into organic systems. Recent examples of these compounds as substrates are discussed in this article.
Carbamic acid, propyl-, phenylmethyl ester
2-Propen-1-ol, 3-(phenylmethoxy)-, (2E)-
2-Propenoic acid, 3-(2-propenyloxy)-, methyl ester, (2E)-
Ethanol, 2-[(5-chloro-2-nitrophenyl)amino]-
2-Propenoic acid, 3-ethoxy-, methyl ester, (2E)-
2-Propenamide, N-methoxy-N-methyl-3-(4-methylphenyl)-, (2E)-
1,4-Hexadien-3-one, 1-phenyl-, (1E,4E)-
GLYCINE, N,N-BIS[(1,1-DIMETHYLETHOXY)CARBONYL]-, METHYL ESTER
Bicyclo[2.2.1]heptane-2,3-dimethanol, (1R,2S,3R,4S)-rel-
CYCLOHEXANONE, 3-(4-CHLOROPHENYL)-, (3R)-