Co-reporter:Tayebeh Anajafi, Junru Yu, Abbas Sedigh, Manas K. Haldar, Wallace W. Muhonen, Seth Oberlander, Heather Wasness, Jamie Froberg, MD Shahjahan Molla, Kalpana S. Katti, Yongki Choi, John B. Shabb, D. K. Srivastava, and Sanku Mallik
Molecular Pharmaceutics June 5, 2017 Volume 14(Issue 6) pp:1916-1916
Publication Date(Web):May 11, 2017
DOI:10.1021/acs.molpharmaceut.7b00014
Improving the therapeutic index of anticancer agents is an enormous challenge. Targeting decreases the side effects of the therapeutic agents by delivering the drugs to the intended destination. Nanocarriers containing the nuclear localizing peptide sequences (NLS) translocate to the cell nuclei. However, the nuclear localization peptides are nonselective and cannot distinguish the malignant cells from the healthy counterparts. In this study, we designed a “masked” NLS peptide which is activated only in the presence of overexpressed matrix metalloproteinase-7 (MMP-7) enzyme in the pancreatic cancer microenvironment. This peptide is conjugated to the surface of redox responsive polymersomes to deliver doxorubicin and curcumin to the pancreatic cancer cell nucleus. We have tested the formulation in both two- and three-dimensional cultures of pancreatic cancer and normal cells. Our studies revealed that the drug-encapsulated polymeric vesicles are significantly more toxic toward the cancer cells (shrinking the spheroids up to 49%) compared to the normal cells (shrinking the spheroids up to 24%). This study can lead to the development of other organelle targeted drug delivery systems for various human malignancies.Keywords: curcumin; doxorubicin; matrix metalloproteinase (MMP); nuclear localizing signal (NLS); pancreatic cancer; polymersome;
Co-reporter:Farnaz Fouladi, Kristine J. Steffen, and Sanku Mallik
Bioconjugate Chemistry April 19, 2017 Volume 28(Issue 4) pp:857-857
Publication Date(Web):February 16, 2017
DOI:10.1021/acs.bioconjchem.6b00736
Liposomes are nanocarriers that deliver the payloads at the target site, leading to therapeutic drug concentrations at the diseased site and reduced toxic effects in healthy tissues. Several approaches have been used to enhance the ability of the nanocarrier to target the specific tissues, including ligand-targeted liposomes and stimuli-responsive liposomes. Ligand-targeted liposomes exhibit higher uptake by the target tissue due to the targeting ligand attached to the surface, while the stimuli-responsive liposomes do not release their cargo unless they expose to an endogenous or exogenous stimulant at the target site. In this review, we mainly focus on the liposomes that are responsive to pathologically increased levels of enzymes at the target site. Enzyme-responsive liposomes release their cargo upon contact with the enzyme through several destabilization mechanisms: (1) structural perturbation in the lipid bilayer, (2) removal of a shielding polymer from the surface and increased cellular uptake, (3) cleavage of a lipopeptide or lipopolymer incorporated in the bilayer, and (4) activation of a prodrug in the liposomes.
Co-reporter:P. S. Kulkarni, M. K. Haldar, M. I. Confeld, C. J. Langaas, X. Yang, S. Y. Qian and S. Mallik
Polymer Chemistry 2016 vol. 7(Issue 25) pp:4151-4154
Publication Date(Web):24 May 2016
DOI:10.1039/C6PY00623J
Mitochondria are an attractive target to deliver anticancer drugs. We have synthesized a cationic triphenylphosphonium ion conjugated fluorescent polymer which self-assembles into nanosized polymersomes and targets the encapsulated anticancer drug doxorubicin to cancer cell mitochondria.
Co-reporter:Tayebeh Anajafi, Michael D. Scott, Seungyong You, Xiaoyu Yang, Yongki Choi, Steven Y. Qian, and Sanku Mallik
Bioconjugate Chemistry 2016 Volume 27(Issue 3) pp:762
Publication Date(Web):February 5, 2016
DOI:10.1021/acs.bioconjchem.5b00694
Considering the systemic toxicity of chemotherapeutic agents, there is an urgent need to develop new targeted drug delivery systems. Herein, we have developed a new nuclear targeted, redox sensitive, drug delivery vehicle to simultaneously deliver the anticancer drugs gemcitabine and doxorubicin to the nuclei of pancreatic cancer cells. We prepared polymeric bilayer vesicles (polymersomes), and actively encapsulated the drug combination by the pH gradient method. A redox-sensitive polymer (PEG–S–S–PLA) was incorporated to sensitize the formulation to reducing agent concentration. Acridine orange (AO) was conjugated to the surface of the polymersomes imparting nuclear localizing property. The polymersomes’ toxicity and efficacy were compared with those of a free drug combination using monolayer and three-dimensional spheroid cultures of pancreatic cancer cells. We observed that the redox sensitive, nuclear-targeted polymersomes released more than 60% of their encapsulated contents in response to 50 mM glutathione. The nanoparticles are nontoxic; however, the drug encapsulated vesicles have significant toxicity. The prepared formulation can increase the drug’s therapeutic index by delivering the drugs directly to the cells’ nuclei, one of the key organelles in the cells. This study is likely to initiate research in targeted nuclear delivery using other drug formulations in other types of cancers.
Co-reporter:Prajakta Kulkarni, Manas K. Haldar, Preeya Katti, Courtney Dawes, Seungyong You, Yongki Choi, and Sanku Mallik
Bioconjugate Chemistry 2016 Volume 27(Issue 8) pp:1830
Publication Date(Web):July 8, 2016
DOI:10.1021/acs.bioconjchem.6b00241
Solid tumors are often poorly irrigated due to structurally compromised microcirculation. Uncontrolled multiplication of cancer cells, insufficient blood flow, and the lack of enough oxygen and nutrients lead to the development of hypoxic regions in the tumor tissues. As the partial pressure of oxygen drops below the necessary level (10 psi), the cancer cells modulate their genetic makeup to survive. Hypoxia triggers tumor progression by enhancing angiogenesis, cancer stem cell production, remodeling of the extracellular matrix, and epigenetic changes in the cancer cells. However, the hypoxic regions are usually located deep in the tumors and are usually inaccessible to the intravenously injected drug carrier or the drug. Considering the designs of the reported nanoparticles, it is likely that the drug is delivered to the peripheral tumor tissues, close to the blood vessels. In this study, we prepared lipid nanoparticles (LNs) comprising the synthesized hypoxia-responsive lipid and a peptide–lipid conjugate. We observed that the resultant LNs penetrated to the hypoxic regions of the tumors. Under low oxygen partial pressure, the hypoxia-responsive lipid undergoes reduction, destabilizing the lipid membrane, and releasing encapsulated drugs from the nanoparticles. We demonstrated the results employing spheroidal cultures of the pancreatic cancer cells BxPC-3. We observed that the peptide-decorated, drug encapsulated LNs reduced the viability of pancreatic cancer cells of the spheroids to 35% under hypoxic conditions.
Co-reporter:Prajakta Kulkarni, Manas K. Haldar, Seungyong You, Yongki Choi, and Sanku Mallik
Biomacromolecules 2016 Volume 17(Issue 8) pp:
Publication Date(Web):June 15, 2016
DOI:10.1021/acs.biomac.6b00350
Hypoxia in tumors contributes to overall tumor progression by assisting in epithelial-to-mesenchymal transition, angiogenesis, and metastasis of cancer. In this study, we have synthesized a hypoxia-responsive, diblock copolymer poly(lactic acid)–azobenzene–poly(ethylene glycol), which self-assembles to form polymersomes in an aqueous medium. The polymersomes did not release any encapsulated contents for 50 min under normoxic conditions. However, under hypoxia, 90% of the encapsulated dye was released in 50 min. The polymersomes encapsulated the combination of anticancer drugs gemcitabine and erlotinib with entrapment efficiency of 40% and 28%, respectively. We used three-dimensional spheroid cultures of pancreatic cancer cells BxPC-3 to demonstrate hypoxia-mediated release of the drugs from the polymersomes. The vesicles were nontoxic. However, a significant decrease in cell viability was observed in hypoxic spheroidal cultures of BxPC-3 cells in the presence of drug encapsulated polymersomes. These polymersomes have potential for future applications in imaging and treatment of hypoxic tumors.
Co-reporter:Rahul Nahire, Rayat Hossain, Rupa Patel, Shirshendu Paul, Varsha Meghnani, Avinash H. Ambre, Kara N. Gange, Kalpana S. Katti, Estelle Leclerc, D. K. Srivastava, Kausik Sarkar, and Sanku Mallik
Molecular Pharmaceutics 2014 Volume 11(Issue 11) pp:4059-4068
Publication Date(Web):October 1, 2014
DOI:10.1021/mp500186a
Liposomes are representative lipid nanoparticles widely used for delivering anticancer drugs, DNA fragments, or siRNA to cancer cells. Upon targeting, various internal and external triggers have been used to increase the rate for contents release from the liposomes. Among the internal triggers, decreased pH within the cellular lysosomes has been successfully used to enhance the rate for releasing contents. However, imparting pH sensitivity to liposomes requires the synthesis of specialized lipids with structures that are substantially modified at a reduced pH. Herein, we report an alternative strategy to render liposomes pH sensitive by encapsulating a precursor which generates gas bubbles in situ in response to acidic pH. The disturbance created by the escaping gas bubbles leads to the rapid release of the encapsulated contents from the liposomes. Atomic force microscopic studies indicate that the liposomal structure is destroyed at a reduced pH. The gas bubbles also render the liposomes echogenic, allowing ultrasound imaging. To demonstrate the applicability of this strategy, we have successfully targeted doxorubicin-encapsulated liposomes to the pancreatic ductal carcinoma cells that overexpress the folate receptor on the surface. In response to the decreased pH in the lysosomes, the encapsulated anticancer drug is efficiently released. Contents released from these liposomes are further enhanced by the application of continuous wave ultrasound (1 MHz), resulting in substantially reduced viability for the pancreatic cancer cells (14%).Keywords: drug delivery; echogenic liposomes; pancreatic cancer; pH-sensitive liposomes; ultrasound;
Co-reporter:Prajakta S. Kulkarni, Manas K. Haldar, Rahul R. Nahire, Preeya Katti, Avinash H. Ambre, Wallace W. Muhonen, John B. Shabb, Sathish K. R. Padi, Raushan K. Singh, Pawel P. Borowicz, D. K. Shrivastava, Kalpana S. Katti, Katie Reindl, Bin Guo, and Sanku Mallik
Molecular Pharmaceutics 2014 Volume 11(Issue 7) pp:2390-2399
Publication Date(Web):May 14, 2014
DOI:10.1021/mp500108p
Significant differences in biochemical parameters between normal and tumor tissues offer an opportunity to chemically design drug carriers which respond to these changes and deliver the drugs at the desired site. For example, overexpression of the matrix metalloproteinase-9 (MMP-9) enzyme in the extracellular matrix of tumor tissues can act as a trigger to chemically modulate the drug delivery from the carriers. In this study, we have synthesized an MMP-9-cleavable, collagen mimetic lipopeptide which forms nanosized vesicles with the POPC, POPE-SS-PEG, and cholesteryl-hemisuccinate lipids. The lipopeptide retains the triple-helical conformation when incorporated into these nanovesicles. The PEG groups shield the substrate lipopeptides from hydrolysis by MMP-9. However, in the presence of elevated glutathione levels, the PEG groups are reductively removed, exposing the lipopeptides to MMP-9. The resultant peptide-bond cleavage disturbs the vesicles’ lipid bilayer, leading to the release of encapsulated contents. These PEGylated nanovesicles are capable of encapsulating the anticancer drug gemcitabine with 50% efficiency. They were stable in physiological conditions and in human serum. Effective drug release was demonstrated using the pancreatic ductal carcinoma cells (PANC-1 and MIAPaCa-2) in two-dimensional and three-dimensional “tumor-like” spheroid cultures. A reduction in tumor growth was observed after intravenous administration of the gemcitabine-encapsulated nanovesicles in the xenograft model of athymic, female nude mice.Keywords: drug delivery; drug release; matrix metalloproteinase-9; nanoparticle; pancreatic cancer cell spheroids; peptide;
Co-reporter:Rahul Nahire, Manas K. Haldar, Shirshendu Paul, Avinash H. Ambre, Varsha Meghnani, Buddhadev Layek, Kalpana S. Katti, Kara N. Gange, Jagdish Singh, Kausik Sarkar, Sanku Mallik
Biomaterials 2014 35(24) pp: 6482-6497
Publication Date(Web):
DOI:10.1016/j.biomaterials.2014.04.026
Co-reporter:Rahul Nahire, Manas K. Haldar, Shirshendu Paul, Anaas Mergoum, Avinash H. Ambre, Kalpana S. Katti, Kara N. Gange, D. K. Srivastava, Kausik Sarkar, and Sanku Mallik
Biomacromolecules 2013 Volume 14(Issue 3) pp:
Publication Date(Web):February 8, 2013
DOI:10.1021/bm301894z
Although lipid nanoparticles are promising drug delivery vehicles, passive release of encapsulated contents at the target site is often slow. Herein, we report contents release from targeted, polymer-coated, echogenic lipid nanoparticles in the cell cytoplasm by redox trigger and simultaneously enhanced by diagnostic frequency ultrasound. The lipid nanoparticles were polymerized on the external leaflet using a disulfide cross-linker. In the presence of cytosolic concentrations of glutathione, the lipid nanoparticles released 76% of encapsulated contents. Plasma concentrations of glutathione failed to release the encapsulated contents. Application of 3 MHz ultrasound for 2 min simultaneously with the reducing agent enhanced the release to 96%. Folic acid conjugated, doxorubicin-loaded nanoparticles showed enhanced uptake and higher cytotoxicity in cancer cells overexpressing the folate receptor (compared to the control). With further developments, these lipid nanoparticles have the potential to be used as multimodal nanocarriers for simultaneous targeted drug delivery and ultrasound imaging.
Co-reporter:Michael D. Scott, Rinku Dutta, Manas K. Haldar, Bin Guo, Daniel L. Friesner, and Sanku Mallik
Analytical Chemistry 2012 Volume 84(Issue 1) pp:17
Publication Date(Web):December 12, 2011
DOI:10.1021/ac202301k
Using water-soluble, fluorescent, flexible polymers, we have devised a novel methodology for identification and differentiation of prostate cancer cells. Using a stepwise linear discriminant analysis, we demonstrate that the differential modulations of the polymer emission intensities in the presence of conditioned cell culture media can be used to distinguish between prostate cancer subtypes and between cancerous and noncancer cells. The differences in the compositions of the conditioned cell culture media are likely contributing to different fluorescence spectral patterns of the polymers. This in vitro approach may provide a novel platform for the development of an alternative prostate cancer diagnostic and subtyping technique.
Co-reporter:Michael D. Scott, Rinku Dutta, Manas K. Haldar, Anil Wagh, Thomas R. Gustad, Benedict Law, Daniel L. Friesner and Sanku Mallik
Analyst 2012 vol. 137(Issue 23) pp:5487-5490
Publication Date(Web):04 Oct 2012
DOI:10.1039/C2AN35877H
Herein, we report the application of synthesized fluorescent, water soluble polymers for post-translational subtyping and differentiation of breast cancer cells in vitro. The fluorescence emission spectra from these polymers were modulated differently in the presence of conditioned cell culture media from various breast cancer cells. These polymers differentiate at a post-translation level possibly due to their ability to interact with extracellular enzymes that are over-expressed in cancerous conditions.
Co-reporter:Rahul Nahire, Shirshendu Paul, Michael D. Scott, Raushan K. Singh, Wallace W. Muhonen, John Shabb, Kara N. Gange, D. K. Srivastava, Kausik Sarkar, and Sanku Mallik
Molecular Pharmaceutics 2012 Volume 9(Issue 9) pp:2554-2564
Publication Date(Web):July 31, 2012
DOI:10.1021/mp300165s
The extracellular enzyme matrix metalloproteinase-9 (MMP-9) is overexpressed in atherosclerotic plaques and in metastatic cancers. The enzyme is responsible for rupture of the plaques and for the invasion and metastasis of a large number of cancers. The ability of ultrasonic excitation to induce thermal and mechanical effects has been used to release drugs from different carriers. However, the majority of these studies were performed with low frequency ultrasound (LFUS) at kilohertz frequencies. Clinical usage of LFUS excitations will be limited due to harmful biological effects. Herein, we report our results on the release of encapsulated contents from substrate lipopeptide incorporated echogenic liposomes triggered by recombinant human MMP-9. The contents release was further enhanced by the application of diagnostic frequency (3 MHz) ultrasound. The echogenic liposomes were successfully imaged employing a medical ultrasound transducer (4–15 MHz). The conditioned cell culture media from cancer cells (secreting MMP-9) released the encapsulated dye from the liposomes (30–50%), and this release is also increased (50–80%) by applying diagnostic frequency ultrasound (3 MHz) for 3 min. With further developments, these liposomes have the potential to serve as multimodal carriers for triggered release and simultaneous ultrasound imaging.Keywords: echogenic liposomes; MMP-9 triggered release; ultrasound triggered release;
Co-reporter:Erin K. Nyren-Erickson, Manas K. Haldar, Jessica R. Totzauer, Riley Ceglowski, Dilipkumar S. Patel, Daniel L. Friesner, D. K. Srivastava, and Sanku Mallik
Langmuir 2012 Volume 28(Issue 46) pp:16115-16125
Publication Date(Web):October 26, 2012
DOI:10.1021/la302566p
Though the aggregation of glycosaminoglycans (GAGs) in the presence of liposomes and divalent cations has been previously reported, the effects of different GAG species and minor changes in GAG composition on the aggregates that are formed are yet unknown. If minor changes in GAG composition produce observable changes in the liposome aggregate diameter or zeta potential, such a phenomenon may be used to detect potentially dangerous oversulfated contaminants in heparin. We studied the mechanism of the interactions between heparin and its oversulfated glycosaminoglycan contaminants with liposomes. Herein, we demonstrate that Mg2+ acts to shield the incoming glycosaminoglycans from the negatively charged phosphate groups of the phospholipids and that changes in the aggregate diameter and zeta potential are a function of the glycosaminoglycan species and concentration as well as the liposome bilayer composition. These observations are supported by TEM studies. We have shown that the organizational states of the liposome bilayers are influenced by the presence of GAG and excess Mg2+, resulting in a stabilizing effect that increases the Tm value of DSPC liposomes; the magnitude of this effect is also dependent on the GAG species and concentration present. There is an inverse relationship between the percent change in aggregate diameter and the percent change in aggregate zeta potential as a function of GAG concentration in solution. Finally, we demonstrate that the diameter and zeta potential changes in POPC liposome aggregates in the presence of different oversulfated heparin contaminants at low concentrations allow for an accurate detection of oversulfated chondroitin sulfate at concentrations of as low as 1 mol %.
Co-reporter:Erin K. Nyren-Erickson, Manas K. Haldar, Yan Gu, Steven Y. Qian, Daniel L. Friesner, and Sanku Mallik
Analytical Chemistry 2011 Volume 83(Issue 15) pp:5989
Publication Date(Web):June 16, 2011
DOI:10.1021/ac2009993
We have successfully synthesized a lipid containing the pyranine dye as the hydrophilic headgroup. This lipid was incorporated into liposomes with 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine as the major component. The resultant liposomes displayed differential modulations in fluorescence emission intensity in the presence of nanomolar concentrations of different glycosaminoglycans. Linear discriminant analysis of the fluorescence response data demonstrate that the liposomes are able to distinguish between different GAGs. In addition, we also demonstrate that the liposomes incorporating the pyranine lipid are able to distinguish between dilute serum from healthy individuals and serum containing elevated chondroitin sulfate (simulated serum from an Alzheimer’s disease patient).
Co-reporter:Rinku Dutta, Michael D. Scott, Manas K. Haldar, Bratati Ganguly, D.K. Srivastava, Daniel L. Friesner, Sanku Mallik
Bioorganic & Medicinal Chemistry Letters 2011 Volume 21(Issue 7) pp:2007-2010
Publication Date(Web):1 April 2011
DOI:10.1016/j.bmcl.2011.02.020
Matrix metalloproteinases (MMPs) are overexpressed in various pathological conditions, including cancers. Although these isozymes have similar active sites, the patterns of exposed amino acids on their surfaces are different. Herein, we report the synthesis and molecular interactions of two water soluble, fluorescent polymers which demonstrate selective interactions with MMP-9 compared to MMP-7 and -10.
Co-reporter:Jayati Banerjee, Andrea J. Hanson, Erin K. Nyren-Erickson, Bratati Ganguli, Anil Wagh, Wallace W. Muhonen, Benedict Law, John B. Shabb, D. K. Srivastava and Sanku Mallik
Chemical Communications 2010 vol. 46(Issue 18) pp:3209-3211
Publication Date(Web):22 Mar 2010
DOI:10.1039/B926554F
A liposome-based amplified detection system is presented for the cancer cell secreted pathogenic enzyme matrix metalloproteinase-9 which does not require the use of biological antibodies.
Co-reporter:Rajesh Subramaniam, Ying Xiao, Yunjing Li, Steven Y. Qian, Wenfang Sun, Sanku Mallik
Tetrahedron Letters 2010 Volume 51(Issue 3) pp:529-532
Publication Date(Web):20 January 2010
DOI:10.1016/j.tetlet.2009.11.084
Syntheses of coumarin-containing lipids and liposomal formulations incorporating these lipids are studied. The influence of the lipid head groups in enhancing the release efficiency of these liposomes under light irradiation is studied and a molecular mechanism is provided.
Co-reporter:Jayati Banerjee, Andrea J. Hanson, Bhushan Gadam, Adekunle I. Elegbede, Shakila Tobwala, Bratati Ganguly, Anil V. Wagh, Wallace W. Muhonen, Benedict Law, John B. Shabb, D. K. Srivastava and Sanku Mallik
Bioconjugate Chemistry 2009 Volume 20(Issue 7) pp:1332
Publication Date(Web):June 24, 2009
DOI:10.1021/bc9000646
Liposomes have been widely used as a drug delivery vehicle, and currently, more than 10 liposomal formulations are approved by the Food and Drug Administration for clinical use. However, upon targeting, the release of the liposome-encapsulated contents is usually slow. We have recently demonstrated that contents from appropriately formulated liposomes can be rapidly released by the cancer-associated enzyme matrix metalloproteinase-9 (MMP-9). Herein, we report our detailed studies to optimize the liposomal formulations. By properly selecting the lipopeptide, the major lipid component, and their relative amounts, we demonstrate that the contents are rapidly released in the presence of cancer-associated levels of recombinant human MMP-9. We observed that the degree of lipid mismatch between the lipopepides and the major lipid component profoundly affects the release profiles from the liposomes. By utilizing the optimized liposomal formulations, we also demonstrate that cancer cells (HT-29) which secrete low levels of MMP-9 failed to release a significant amount of the liposomal contents. Metastatic cancer cells (MCF7) secreting high levels of the enzyme rapidly release the encapsulated contents from the liposomes.
Co-reporter:Nihar Sarkar, Jayati Banerjee, Andrea J. Hanson, Adekunle I. Elegbede, Theresa Rosendahl, Aaron B. Krueger, Abir L. Banerjee, Shakila Tobwala, Rongying Wang, Xiaoning Lu, Sanku Mallik and D. K. Srivastava
Bioconjugate Chemistry 2008 Volume 19(Issue 1) pp:57
Publication Date(Web):December 14, 2007
DOI:10.1021/bc070081p
We offer a novel methodology for formulating liposomes by incorporating sequence-specific collagen-mimetic peptides such that they are specifically “uncorked” by a matrix metalloproteinase, MMP-9. By encapsulating carboxyfluorescein (as a self-quenching fluorescent dye), we demonstrate that the time-dependent release of the dye from liposomes is due to the specific enzymatic cleavage of the surface-exposed collagen-mimetic peptides. The specificity of such cleavage is attested by the fact that the liposomal “uncorking” and their content release occur only by MMP-9 and not by a general proteolytic enzyme, trypsin, despite the fact that the collagen mimetic peptides contain the trypsin cleavage site. The mechanistic details underlying the formulations of liposomes and their enzyme-selective “uncorking” and content release are discussed. Arguments are presented that such liposomes can be fine-tuned to serve as the drug delivery vehicles for the detection and treatment of various human diseases, which occur due to the overexpression of a variety of pathogenic matrix metalloproteinases.
Co-reporter:Manas K. Haldar, Michael D. Scott, Nitesh Sule, D.K. Srivastava, Sanku Mallik
Bioorganic & Medicinal Chemistry Letters 2008 Volume 18(Issue 7) pp:2373-2376
Publication Date(Web):1 April 2008
DOI:10.1016/j.bmcl.2008.02.066
The syntheses of a new class of barbiturate-based inhibitors for human and Escherichia Coli methionine aminopeptidase-1 (MetAP-1) are described. Some of the synthesized inhibitors show selective inhibition of the human enzyme with high potency.The syntheses of a new class of barbiturate-based inhibitors for methionine aminopeptidase-1 are described.
Co-reporter:Rajesh Subramaniam, Manas K. Haldar, Shakila Tobwala, Bratati Ganguly, D.K. Srivastava, Sanku Mallik
Bioorganic & Medicinal Chemistry Letters 2008 Volume 18(Issue 11) pp:3333-3337
Publication Date(Web):1 June 2008
DOI:10.1016/j.bmcl.2008.04.035
A series of bis-(arylsulfonamide) hydroxamate inhibitors were synthesized. These compounds exhibit good potency against MMP-7 and MMP-9 depending on the nature, steric bulk, and substitution pattern of the substituents in the benzene ring. In general, the preliminary structure–activity relationships (SAR) suggest that among the DAPA hydroxamates (i) electron-rich benzene rings of the sulfonamides may produce better inhibitors than electron-poor analogs. However, potential H-bond acceptors can reverse the trend depending on the isozyme; (ii) isozyme selectivity between MMP-7 and -9 can be conferred through steric bulk and substitution pattern of the substituents in the benzene ring, and (iii) the MMP-10 inhibition pattern of the compounds paralleled that for MMP-9.The syntheses of a series of selective MMP inhibitors are described.
Co-reporter:Adekunle I. Elegbede, Manas K. Haldar, Sumathra Manokaran, Joel Kooren, Bidhan C. Roy, Sanku Mallik and D. K. Srivastava
Chemical Communications 2007 (Issue 32) pp:3377-3379
Publication Date(Web):12 Jun 2007
DOI:10.1039/B707141H
We offer a novel strategy for designing “multi-prong” inhibitors of enzymes by incorporating selective ligands on the liposomal surface.
Co-reporter:Adekunle I. Elegbede, Manas K. Haldar, Sumathra Manokaran, Sanku Mallik and D. K. Srivastava
Chemical Communications 2007 (Issue 43) pp:4495-4497
Publication Date(Web):29 Aug 2007
DOI:10.1039/B709815D
We report the selective recognition of carbonic anhydrase isozymes based on the excited-state lifetimes of chelated Eu3+ ions incorporated in polymerized liposomes.
Co-reporter:Jayati Banerjee, Manas K. Haldar, Sumathra Manokaran, Sanku Mallik and D. K. Srivastava
Chemical Communications 2007 (Issue 26) pp:2723-2725
Publication Date(Web):20 Apr 2007
DOI:10.1039/B701421J
We report the synthesis and fluorescence properties of naphthalenesulfonamide derivatives as active site probes for carbonic anhydrases.
Co-reporter:Binita Chandra, Rajesh Subramaniam, Sanku Mallik and D. K. Srivastava
Organic & Biomolecular Chemistry 2006 vol. 4(Issue 9) pp:1730-1740
Publication Date(Web):29 Mar 2006
DOI:10.1039/B518359F
In pursuit of designing photocleavable liposomes as drug delivery vehicles, we synthesized several amphiphilic lipids by connecting stearyl amine (as the non-polar tail) and charged amino acids (as polar heads) via the o-nitrobenzyl derivatives. The lipids containing Glu, Asp, and Lys amino acids were subjected to photocleavage reaction by UV light, and the overall spectral changes of the chromophoric o-nitrobenzyl conjugates were determined as a function of time. The experimental data revealed that the feasibility of the cleavage reaction, nature and magnitude of the spectral changes during the course of the cleavage reaction, and their overall kinetic profiles were dictated by the type of amino acid constituting the polar head groups. The cleavage reactions of the Asp and Glu containing lipids were found to be more facile than that of the lysine-containing lipid. Using these lipids, we formulated photocleavable liposomes, and investigated the photo-triggered release of an encapsulated (within the liposomal lumen) dye as a function of time. The kinetic data revealed that the release of the liposomal content conformed to a two-step mechanism, of which the first (fast) step involved the photocleavage of lipids followed by the slow release of the liposomal content during the second step. The overall mechanistic features intrinsic to the photocleavage of Asp, Glu and Lys containing o-nitrobenzyl conjugated lipids, and their potential applications in formulating liposomes (whose contents can be “unloaded” by the UV light) as drug delivery vehicles are discussed.
Co-reporter:Binita Chandra, Sanku Mallik and D. K. Srivastava
Chemical Communications 2005 (Issue 24) pp:3021-3023
Publication Date(Web):11 May 2005
DOI:10.1039/B503423J
The design of o-nitrobenzyl containing photocleavable lipid–amino acid conjugates, and their application in liposomal uncorking are described.
Co-reporter:Abir L. Banerjee, Shakila Tobwala, Manas K. Haldar, Michael Swanson, Bidhan C. Roy, Sanku Mallik and D. K. Srivastava
Chemical Communications 2005 (Issue 20) pp:2549-2551
Publication Date(Web):07 Mar 2005
DOI:10.1039/B501780G
A novel strategy of blocking the active site accessibility of MMP-9 by “multi-prong” surface binding groups is described
Co-reporter:Bratati Ganguly, Jayati Banerjee, Adekunle I. Elegbede, Donald J. Klocke, ... D.K. Srivastava
FEBS Letters (11 December 2007) Volume 581(Issue 29) pp:5723-5726
Publication Date(Web):11 December 2007
DOI:10.1016/j.febslet.2007.11.042
We provide evidence that matrix metalloproteinase-7 (MMP-7) interacts with anionic, cationic and neutral lipid membranes, although it interacts strongest with anionic membranes. While the catalytic activity of the enzyme remains unaffected upon binding to neutral and negatively charged membranes, it is drastically impaired upon binding to the positively charged membranes. The structural data reveal that the origin of these features lies in the “bipolar” distribution of the electrostatic surface potentials on the crystallographic structure of MMP-7.
Co-reporter:Adekunle I. Elegbede, Manas K. Haldar, Sumathra Manokaran, Joel Kooren, Bidhan C. Roy, Sanku Mallik and D. K. Srivastava
Chemical Communications 2007(Issue 32) pp:NaN3379-3379
Publication Date(Web):2007/06/12
DOI:10.1039/B707141H
We offer a novel strategy for designing “multi-prong” inhibitors of enzymes by incorporating selective ligands on the liposomal surface.
Co-reporter:Jayati Banerjee, Andrea J. Hanson, Erin K. Nyren-Erickson, Bratati Ganguli, Anil Wagh, Wallace W. Muhonen, Benedict Law, John B. Shabb, D. K. Srivastava and Sanku Mallik
Chemical Communications 2010 - vol. 46(Issue 18) pp:NaN3211-3211
Publication Date(Web):2010/03/22
DOI:10.1039/B926554F
A liposome-based amplified detection system is presented for the cancer cell secreted pathogenic enzyme matrix metalloproteinase-9 which does not require the use of biological antibodies.
Co-reporter:Adekunle I. Elegbede, Manas K. Haldar, Sumathra Manokaran, Sanku Mallik and D. K. Srivastava
Chemical Communications 2007(Issue 43) pp:NaN4497-4497
Publication Date(Web):2007/08/29
DOI:10.1039/B709815D
We report the selective recognition of carbonic anhydrase isozymes based on the excited-state lifetimes of chelated Eu3+ ions incorporated in polymerized liposomes.
Co-reporter:Jayati Banerjee, Manas K. Haldar, Sumathra Manokaran, Sanku Mallik and D. K. Srivastava
Chemical Communications 2007(Issue 26) pp:NaN2725-2725
Publication Date(Web):2007/04/20
DOI:10.1039/B701421J
We report the synthesis and fluorescence properties of naphthalenesulfonamide derivatives as active site probes for carbonic anhydrases.