Lin Yuan

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Name: 袁林; Yuan, Lin
Organization: Hunan University , China
Department: College of Chemistry and Chemical Engineering
Title: Lecturer(PhD)
Co-reporter:Dan Cheng, Yue Pan, Lu Wang, Zebing ZengLin Yuan, Xiaobing ZhangYoung-Tae Chang
Journal of the American Chemical Society 2016 Volume 139(Issue 1) pp:285-292
Publication Date(Web):December 5, 2016
DOI:10.1021/jacs.6b10508
Peroxynitrite (ONOO–) is a kind of reactive oxygen species (ROS) with super activity of oxidization and nitration, and overproduction of ONOO– is associated with pathogenesis of many diseases. Thus, accurate detection of ONOO– with high sensitivity and selectivity is imperative for elucidating its functions in health or disease states. Herein we for the first time present a new two-photon ratiometric fluorescent ONOO– probe (MITO-CC) based on FRET mechanism by combining rational design strategy and dye-screening approach. MITO-CC, with fast response rate (within 20 s), excellent sensitivity (detection limit = 11.30 nM) and outstanding selectivity toward ONOO–, was successfully applied to ratiometric detection of endogenous ONOO– produced by HepG2/RAW264.7 cells and further employed for imaging oxidative stress in an inflamed mouse model. Therefore, probe MITO-CC could be a potential biological tool to explore the roles of ONOO– under different physiological and pathological settings.
Co-reporter:Juanjuan Peng;Chai Lean Teoh;Xiao Zeng;Animesh Samanta;Lu Wang;Wang Xu;Dongdong Su;Xiaogang Liu;Young-Tae Chang
Advanced Functional Materials 2016 Volume 26( Issue 2) pp:191-199
Publication Date(Web):
DOI:10.1002/adfm.201503715

Hydrogen sulfide (H2S) has been recognized as one of most important gaseous signaling molecules mediated by a variety of physiological and pathological processes. Yet, its functions remain largely elusive due to the lack of potent monitoring methods. Hereby this issue is addressed with a powerful new platform—dye-assembled upconversion nanoparticles (UCNPs). A series of chromophores with different absorption bands and fast responses towards H2S is combined with UCNPs and results in a library of H2S sensors with responsive emission signals ranging from the visible to the near-infrared (NIR) region. These nanoprobes demonstrate highly selective and rapid responses to H2S in vitro and in cells. Furthermore, H2S levels in blood can be detected using the developed nanoprobes. Hence the reported H2S sensing platform can serve as a powerful diagnostic tool to research H2S functions and to investigate H2S-related diseases.

Co-reporter:Yanfen Wei, Dan Cheng, Tianbing Ren, Yinhui Li, Zebing Zeng, and Lin Yuan
Analytical Chemistry 2016 Volume 88(Issue 3) pp:1842
Publication Date(Web):January 5, 2016
DOI:10.1021/acs.analchem.5b04169
The real-time monitoring of key biospecies in the living systems has received thrusting attention during the past decades. Specifically, fluorescent detection based on near-infrared (NIR) fluorescent probes is highly favorable for live cells, live tissues, and even animal imaging, owing to the substantial merits of the NIR window, such as minimal phototoxicity, deep penetration into tissues, and low autofluorescence background. Nevertheless, developing potent NIR fluorescent probes still poses serious challenges to the chemists because traditional NIR fluorophores are less tunable than visible-wavelength fluorophores. To address this issue, here we report a set of novel NIR hybrid fluorophores, namely, the hybrid chromenylium-cyanine fluorophore (CC-Fluor), in which both the fluorescence intensity and the emission wavelength can be easily adjusted by the conformational changes and substitution groups. Compared to known NIR fluorophores, the new CC-Fluors are substantially advantageous for NIR probe development: (1) CC-Fluors display tunable and moderate Stokes shifts and quantum yields; (2) the fluorophores are stable at physiological conditions after long-term incubation; (3) the absorption maxima of CC-Fluors coincide with the common laser spectral lines in mainstream in vivo imaging systems; (4) most importantly, CC-Fluors can be easily modified to prepare NIR probes targeting various biospecies. To fully demonstrate the practical utility of CC-Fluors, we report two innovative NIR probes, a ratiometric pH probe and a turn-on Hg2+ probe, both are successfully employed in live animal imaging. Hence, the detailed studies allow us to confirm that CC-Fluors can work as an excellent platform for developing NIR probes for the detection of species in living systems.
Co-reporter:Jun-Bin Li, Qian-Qian Wang, Lin Yuan, Yong-Xiang Wu, Xiao-Xiao Hu, Xiao-Bing Zhang and Weihong Tan  
Analyst 2016 vol. 141(Issue 11) pp:3395-3402
Publication Date(Web):14 Apr 2016
DOI:10.1039/C6AN00473C
Formaldehyde (FA) plays an important role in living systems as a reactive carbonyl species (RCS). An abnormal degree of FA is known to induce neurodegeneration, cognitive decrease and memory loss owing to the formation of strong cross-link DNA and protein and other molecules. The development of efficient methods for biological FA detection is of great biomedical importance. Although a few one-photon FA fluorescent probes have been reported for imaging in living cells, probes excited by two photons are more suitable for bio-imaging due to their low background fluorescence, less photobleaching, and deep penetration depth. In this study, a two-photon fluorescent probe FATP1 for FA detection and bio-imaging in living cells and tissues was reported. The detection is based on the 2-aza-Cope sigmatropic rearrangement followed by elimination to release the fluorophore, resulting in both one- and two-photon excited fluorescence increase. The probe FATP1 showed a high sensitivity to FA with a detection limit of 0.2 μM. Moreover, FATP1 enabled the two-photon bio-imaging of FA in live HEK-293 cells and tissues with tissue-imaging depths of 40–170 μm. Furthermore, FATP1 could be applied for the monitoring of endogenous FA in live MCF-7 cells, presaging its practical applications in biological systems.
Co-reporter:Lu Wang;Dr. Lin Yuan;Xian Zeng;Dr. Juanjuan Peng;Dr. Yong Ni;Jun Cheng Er;Wang Xu;Bikram Keshari Agrawalla;Dr. Dongdong Su;Dr. Beomsue Kim;Dr. Young-Tae Chang
Angewandte Chemie International Edition 2016 Volume 55( Issue 5) pp:1773-1776
Publication Date(Web):
DOI:10.1002/anie.201510003

Abstract

Adenosine triphosphate (ATP), commonly produced in mitochondria, is required by almost all the living organisms; thus fluorescent probes for monitoring mitochondrial ATP levels fluctuation are essential and highly desired. Herein, we report a multisite-binding switchable fluorescent probe, ATP-Red 1, which selectively and rapidly responds to intracellular concentrations of ATP. Live-cell imaging indicated that ATP-Red 1 mainly localized to mitochondria with good biocompatibility and membrane penetration. In particular, with the help of ATP-Red 1, we successfully observed not only the decreased mitochondrial ATP levels in the presence of KCN and starvation state, but also the increased mitochondrial ATP levels in the early stage of cell apoptosis. These results indicate that ATP-Red 1 is a useful tool for investigating ATP-relevant biological processes.

Co-reporter:Lu Wang;Dr. Lin Yuan;Xian Zeng;Dr. Juanjuan Peng;Dr. Yong Ni;Jun Cheng Er;Wang Xu;Bikram Keshari Agrawalla;Dr. Dongdong Su;Dr. Beomsue Kim;Dr. Young-Tae Chang
Angewandte Chemie 2016 Volume 128( Issue 5) pp:1805-1808
Publication Date(Web):
DOI:10.1002/ange.201510003

Abstract

Adenosine triphosphate (ATP), commonly produced in mitochondria, is required by almost all the living organisms; thus fluorescent probes for monitoring mitochondrial ATP levels fluctuation are essential and highly desired. Herein, we report a multisite-binding switchable fluorescent probe, ATP-Red 1, which selectively and rapidly responds to intracellular concentrations of ATP. Live-cell imaging indicated that ATP-Red 1 mainly localized to mitochondria with good biocompatibility and membrane penetration. In particular, with the help of ATP-Red 1, we successfully observed not only the decreased mitochondrial ATP levels in the presence of KCN and starvation state, but also the increased mitochondrial ATP levels in the early stage of cell apoptosis. These results indicate that ATP-Red 1 is a useful tool for investigating ATP-relevant biological processes.

Co-reporter:Lin Yuan, Fangping Jin, Zebing Zeng, Chengbin Liu, Shenglian Luo and Jishan Wu  
Chemical Science 2015 vol. 6(Issue 4) pp:2360-2365
Publication Date(Web):28 Jan 2015
DOI:10.1039/C4SC03883E
Two-photon excitation (TPE) probe-based fluorescence imaging has become one of the most attractive diagnostic techniques to investigate biomolecules and biological events in live cells and tissues. At the current stage most of the TPE-based sensing is reflected by fluorescence intensity changes. Nevertheless the mere altering of intensity could be facilely affected by ambient conditions. On the other hand, TPE probes based on an intramolecular charge transfer (ICT) strategy could solve this problem to some extent with a morphology change-induced emission shift. However their applications are yet constrained due to the inherent limitation of ICT, e.g. the high degree of overlap of two emissions bands and shifts of the TPE maxima. To achieve the desired TPE-based sensing and to circumvent the problems stated above, we adapted a Förster resonance energy transfer (FRET) strategy to develop small molecule ratiometric TPE fluorescent probes. Our FRET-based ratiometric TPE fluorescent probe displays a remarkable emission shift (up to 125 nm) with two well-resolved emission bands. Hence the ratio of these two emission bands could enable the measurement of fluorescence changes more accurately, thus further improving imaging in live cells and deep tissues. To the best of our knowledge, the current reported probe has the largest emission shift among all the small molecule ratiometric TPE fluorescent probes while the maximum TPE wavelength remains unchanged. This work has provided a FRET approach to fabricate novel small molecule ratiometric TPE fluorescent probes that improve imaging in deep tissues.
Co-reporter:Wang Xu, Chai Lean Teoh, Juanjuan Peng, Dongdong Su, Lin Yuan, Young-Tae Chang
Biomaterials 2015 56() pp: 1-9
Publication Date(Web):
DOI:10.1016/j.biomaterials.2015.03.038
Co-reporter:Lin Yuan, Qing-Ping Zuo
Sensors and Actuators B: Chemical 2014 196() pp: 151-155
Publication Date(Web):
DOI:10.1016/j.snb.2014.01.118
Co-reporter:Dr. Lin Yuan;Qing-Ping Zuo
Chemistry – An Asian Journal 2014 Volume 9( Issue 6) pp:1544-1549
Publication Date(Web):
DOI:10.1002/asia.201400131

Abstract

Hydrogen sulfide (H2S) is connected with various physiological and pathological functions. However, understanding the important functions of H2S remains challenging, in part because of the lack of tools for detecting endogenous H2S. Herein, compounds Ratio-H2S 1/2 are the first FRET-based mitochondrial-targetable dual-excitation ratiometric fluorescent probes for H2S on the basis of H2S-promoted thiolysis of dinitrophenyl ether. With the enhancement of H2S concentration, the excitation peak at λ≈402 nm of the phenolate form of the hydroxycoumarin unit drastically increases, whereas the excitation band centered at λ≈570 nm from rhodamine stays constant and can serve as a reference signal. Thus, the ratios of fluorescence intensities at λ=402 and 570 nm (I402/I570) exhibit a drastic change from 0.048 in the absence of H2S to 0.36 in the presence of 180 μM H2S; this is a 7.5-fold variation in the excitation ratios. The favorable properties of the probe include the donor and acceptor excitation bands, which exhibit large excitation separations (up to 168 nm separation) and comparable excitation intensities, high sensitivity and selectivity, and function well at physiological pH. In addition, it is demonstrated that the probe can localize in the mitochondria and determine H2S in living cells. It is expected that this strategy will lead to the development of a wide range of mitochondria-targetable dual-excitation ratiometric probes for other analytes with outstanding spectral features, including large separations between the excitation wavelengths and comparable excitation intensities.

Co-reporter:Lin Yuan, Fangping Jin, Zebing Zeng, Chengbin Liu, Shenglian Luo and Jishan Wu
Chemical Science (2010-Present) 2015 - vol. 6(Issue 4) pp:NaN2365-2365
Publication Date(Web):2015/01/28
DOI:10.1039/C4SC03883E
Two-photon excitation (TPE) probe-based fluorescence imaging has become one of the most attractive diagnostic techniques to investigate biomolecules and biological events in live cells and tissues. At the current stage most of the TPE-based sensing is reflected by fluorescence intensity changes. Nevertheless the mere altering of intensity could be facilely affected by ambient conditions. On the other hand, TPE probes based on an intramolecular charge transfer (ICT) strategy could solve this problem to some extent with a morphology change-induced emission shift. However their applications are yet constrained due to the inherent limitation of ICT, e.g. the high degree of overlap of two emissions bands and shifts of the TPE maxima. To achieve the desired TPE-based sensing and to circumvent the problems stated above, we adapted a Förster resonance energy transfer (FRET) strategy to develop small molecule ratiometric TPE fluorescent probes. Our FRET-based ratiometric TPE fluorescent probe displays a remarkable emission shift (up to 125 nm) with two well-resolved emission bands. Hence the ratio of these two emission bands could enable the measurement of fluorescence changes more accurately, thus further improving imaging in live cells and deep tissues. To the best of our knowledge, the current reported probe has the largest emission shift among all the small molecule ratiometric TPE fluorescent probes while the maximum TPE wavelength remains unchanged. This work has provided a FRET approach to fabricate novel small molecule ratiometric TPE fluorescent probes that improve imaging in deep tissues.
6-Methoxy-1-methyl-1H-indole-3-carbaldehyde
1,6,7,12-PERYLENETETROL
6-(Dimethylamino)-2-naphthaldehyde
2-(1,1,3-trimethyl-1H-benzo[e]indol-2(3H)-ylidene)acetaldehyde
1,12-Perylenedione, 6,7-dihydroxy-
2-(4-chlorophenyl)-1-methyl-1H-perimidine
1-Cyclohexene-1-carboxaldehyde, 2-chloro-3-(hydroxymethylene)-
9H-Carbazole-3-carboxaldehyde
Sodium sulfide(Na2(S2))