Co-reporter:Mayumi Kudo;Daniel Carbajo López;Victor Maurizot;Hyuma Masu;Ivan Huc
European Journal of Organic Chemistry 2016 Volume 2016( Issue 14) pp:2457-2466
Publication Date(Web):
DOI:10.1002/ejoc.201600229
Abstract
The incorporation of flexible aliphatic units into otherwise rigid aromatic foldamer sequences may result in different outcomes. The flexible units may have conformational preferences of their own that can be expressed orthogonally to those of the aromatic units. Alternatively, the latter may dictate their folding behavior onto the former. Hybrid aliphatic–aromatic peptidic oligomers combining oxazole-based (O) and quinoline-based (Q) amino acids have been synthesized, and their folding behavior has been investigated in solution by NMR spectroscopy and CD spectroscopy, and in the solid state by X-ray crystallography. Sequences based on the OQQ repeat motif were shown to fold into a canonical aromatic helix motif dominated by the preferences of the quinoline, whereas sequences based on OQ repetitions preferred to fold into a herringbone helix in which the conformational preference of the oxazole units is also expressed.
Co-reporter:Marie Kinoshita, Mai Negishi, Haruka Sakai, Tomoya Hirano, Shuichi Mori, Shinya Fujii, Hiroyuki Kagechika, Aya Tanatani
Bioorganic & Medicinal Chemistry 2016 Volume 24(Issue 21) pp:5602-5610
Publication Date(Web):1 November 2016
DOI:10.1016/j.bmc.2016.09.020
Progesterone is involved in multiple physiological processes, including female reproduction, via binding to the progesterone receptor (PR). We have developed 6-arylcoumarins such as 5 and 6 as non-steroidal PR antagonists with receptor-binding-dependent fluorescence. In this study, we investigated the structure–activity relationships and fluorescence properties of coumarin derivatives bearing a heterocyclic aromatic moiety. Among these derivatives, 7c (IC50: 34 nM) and 10b (IC50: 24 nM) showed more potent PR-antagonistic activity than lead compounds 5 (IC50: 500 nM) and 6 (IC50: 65 nM) in alkaline phosphatase (AP) assay. Compound 9b showed solvent-dependent fluorescence intensity, exhibiting strong fluorescence in the presence of PR LBD only in buffer solution. On the other hand, 10b showed a solvent-dependent shift of the fluorescence maximum wavelength in the presence of PR LBD. These results indicate that 6-arylcoumarin will be a useful scaffold for PR antagonists and fluorescent probes targeting PR.
Co-reporter:Kazumi Inoue, Ko Urushibara, Misae Kanai, Kei Yura, Shinya Fujii, Mari Ishigami-Yuasa, Yuichi Hashimoto, Shuichi Mori, Emiko Kawachi, Mio Matsumura, Tomoya Hirano, Hiroyuki Kagechika, Aya Tanatani
European Journal of Medicinal Chemistry 2015 Volume 102() pp:310-319
Publication Date(Web):18 September 2015
DOI:10.1016/j.ejmech.2015.08.002
•A series of 4-benzyl-1-(2H)-phthalazinone derivatives were synthesized.•4-Benzyl-1-(2H)-phthalazinone with ortho-substituent was a novel scaffold of AR antagonist.•Compound 11c exhibited potent AR antagonistic activity towards both wt and T877A-mutated ARs.•Docking simulation suggested the AR binding feature and mechanism of AR antagonism of 11c.The androgen receptor (AR) plays important roles in multiple physiological functions, including differentiation, growth, and maintenance of male reproductive organs, and also has effects on hair and skin. In this paper, we report the synthesis of nonsteroidal AR antagonists having a 4-benzyl-1-(2H)-phthalazinone skeleton. Among the synthesized compounds, 11c with two ortho-substituents on the phenyl group potently inhibited SC-3 cell proliferation (IC50: 0.18 μM) and showed high wt AR-binding affinity (IC50: 10.9 μM), comparable to that of hydroxyflutamide (3). Compound 11c also inhibited proliferation of LNCaP cells containing T877A-mutated AR. Docking study of 11c with the AR ligand-binding domain indicated that the benzyl group is important for the antagonism. These phthalazinone derivatives may be useful for investigating potential clinical applications of AR antagonists.
Co-reporter:Mayumi Kudo and Aya Tanatani
New Journal of Chemistry 2015 vol. 39(Issue 5) pp:3190-3196
Publication Date(Web):08 Jan 2015
DOI:10.1039/C4NJ01885K
The use of N,N′-dialkylation of aromatic ureas and guanidines to achieve consecutive stereochemical switching from (trans,trans) to (cis,cis) conformations provides an elegant methodology for constructing ladder-like multi-layered aromatic oligoureas and oligoguanidines. Here, we highlight the structural properties and functions of these stable, flexible oligomers, which are candidate backbone structures for novel functional materials including electronic devices, chiral recognition, and bioactive substances.
Co-reporter:Shuichi Mori, Yuki Takeuchi, Aya Tanatani, Hiroyuki Kagechika, Shinya Fujii
Bioorganic & Medicinal Chemistry 2015 Volume 23(Issue 4) pp:803-809
Publication Date(Web):15 February 2015
DOI:10.1016/j.bmc.2014.12.047
Nonsteroidal progesterone receptor (PR) full antagonists are needed as tools for elucidating the physiological functions of PR and as candidates for treatment of various diseases. We designed and synthesized 1,3-diphenyladamantane derivatives, and investigated their PR-antagonistic activity in comparison with our recently developed boron cluster-based PR antagonists. Among the synthesized adamantane derivatives, compound 9a exhibited the most potent PR-antagonistic activity (IC50: 25 nM) and showed high binding affinity for the PR ligand-binding domain, comparable with that of the boron cluster-based PR antagonists. These results suggest that disubstituted adamantane, like the boron cluster m-carborane, is a promising hydrophobic pharmacophore for further structural development of nonsteroidal PR antagonists.
Co-reporter:Shizuka Nishiyama;Ko Urushibara;Hyuma Masu;Isao Azumaya;Hiroyuki Kagechika
Chirality 2015 Volume 27( Issue 8) pp:487-491
Publication Date(Web):
DOI:10.1002/chir.22476
Abstract
Cyclic triamides 4 bearing amidino groups at the meta position of the phenyl rings were synthesized, and their conformational properties in the crystal and in solution were examined. Compound 4a exists as a capsule-type dimer of the enantiomers with a bowl-shaped syn conformation in the crystal state. Compound 4 exists mainly in the syn form in solution, and chiral induction was observed upon addition of a chiral acid to a solution of 4a. Chirality 27:487–491, 2015. © 2015 Wiley Periodicals, Inc.
Co-reporter:Mayumi Kudo ; Victor Maurizot ; Brice Kauffmann ; Aya Tanatani ;Ivan Huc
Journal of the American Chemical Society 2013 Volume 135(Issue 26) pp:9628-9631
Publication Date(Web):June 13, 2013
DOI:10.1021/ja404656z
Control of the spatial organization of proteinogenic side chains is critical for the development of protein mimics with selective recognition properties toward target protein surfaces. We present a novel methodology for producing a linear array of proteinogenic residues based on the incorporation of α-amino acids into sequences of rigid, helically folded oligoamides of 8-amino-2-quinolinecarboxylic acid (Q). When l-leucine (L) was alternated with dimer Q2, the resulting sequence adopted a right-handed helical conformation, as deduced in solution from the CD spectra of l-(LQ2)n (n = 2, 4) and in the solid state from X-ray crystallographic analysis of (±)-(LQ2)4. Each LQ2 segment spanned just one helix turn (pitch of 3.5 Å), and consequently, the four leucine side chains of (LQ2)4 formed a linear array. In solution, NMR analysis showed that both l-(LQ2)2 and l-(LQ2)4 exist as a mixture of two slowly equilibrating folded conformers, the proportion of which strongly varies with the solvent.
Co-reporter:Mio Matsumura, Aya Tanatani, Isao Azumaya, Hyuma Masu, Daisuke Hashizume, Hiroyuki Kagechika, Atsuya Muranaka and Masanobu Uchiyama
Chemical Communications 2013 vol. 49(Issue 23) pp:2290-2292
Publication Date(Web):19 Nov 2012
DOI:10.1039/C2CC37583D
N,N′-Bis(2,3,7,8,12,13,17,18-octaethylporphyrin-5-yl)urea (3) exhibits cis–trans conformational switching depending on the solvent properties, and can adopt the cofacial porphyrin dimer structure under certain conditions. The conformational preference can be switched by electrochemical stimulus.
Co-reporter:Mio Matsumura, Aya Tanatani, Tomoyo Kaneko, Isao Azumaya, Hyuma Masu, Daisuke Hashizume, Hiroyuki Kagechika, Atsuya Muranaka, Masanobu Uchiyama
Tetrahedron 2013 69(51) pp: 10927-10932
Publication Date(Web):
DOI:10.1016/j.tet.2013.10.069
Co-reporter:Noriko Fujimoto, Mio Matsumura, Isao Azumaya, Shizuka Nishiyama, Hyuma Masu, Hiroyuki Kagechika and Aya Tanatani
Chemical Communications 2012 vol. 48(Issue 40) pp:4809-4811
Publication Date(Web):22 Feb 2012
DOI:10.1039/C2CC18177K
Chiral properties of bowl-shaped cyclic triamides bearing functional groups with hydrogen-bonding ability were examined. Chiral induction of cyclic triamide3a was observed by addition of chiral amine in solution, and chiral separation was achieved by simple crystallization to afford chiral capsule-type dimer structure of 4a.
Co-reporter:Angsuma Wongmayura, Shinya Fujii, Shigeru Ito, Atsushi Kano, Yoshiyuki Taoda, Emiko Kawachi, Hiroyuki Kagechika, Aya Tanatani
Bioorganic & Medicinal Chemistry Letters 2012 Volume 22(Issue 4) pp:1756-1760
Publication Date(Web):15 February 2012
DOI:10.1016/j.bmcl.2011.12.137
Vitamin D receptor (VDR) is a nuclear receptor for 1α,25-dihydroxyvitamin D3 (1α,25(OH)2D3), and is an attractive target for multiple clinical applications. We recently developed novel non-secosteroidal VDR ligands bearing a hydrophobic p-carborane cage, thereby establishing the utility of this spherical hydrophobic core structure for development of VDR ligands. Here, we synthesized two series of novel non-secosteroidal VDR ligands with different spherical hydrophobic cores, that is, bicyclo[2.2.2]octane derivatives and p-carborane derivatives, and compared their biological activities in order to examine the difference between the interactions of the C–H hydrocarbon surface and the B–H carborane surface with the receptor. Carborane derivatives exhibited more potent differentiation-inducing activity toward HL-60 cells than did the corresponding bicyclo[2.2.2]octane derivatives. These results suggest that the hydrophobic carborane cage may interact more efficiently than the hydrocarbons with the hydrophobic surface of VDR. This finding further supports the view that carborane structure is a promising option for drug development.
Co-reporter:Misae Kanai, Tomoya Hirano, Isao Azumaya, Iwao Okamoto, Hiroyuki Kagechika, Aya Tanatani
Tetrahedron 2012 68(13) pp: 2778-2783
Publication Date(Web):
DOI:10.1016/j.tet.2012.02.012
Co-reporter:Mayumi Kudo, Kosuke Katagiri, Isao Azumaya, Hiroyuki Kagechika, Aya Tanatani
Tetrahedron 2012 68(23) pp: 4455-4463
Publication Date(Web):
DOI:10.1016/j.tet.2011.12.038
Co-reporter:Haruka Sakai ; Tomoya Hirano ; Shuichi Mori ; Shinya Fujii ; Hiroyuki Masuno ; Marie Kinoshita ; Hiroyuki Kagechika
Journal of Medicinal Chemistry 2011 Volume 54(Issue 20) pp:7055-7065
Publication Date(Web):September 14, 2011
DOI:10.1021/jm2005404
Various 6-arylcoumarin derivatives were designed and synthesized as candidate nonsteroidal type progesterone antagonists. 6-Bromocoumarin derivatives were prepared from the corresponding 4-substituted 2-acetoxy-5-bromobenzaldehyde by employing the Still–Gennari modification of the Horner–Wadsworth–Emmons olefination reaction and were converted to 6-arylcoumarins by means of Suzuki–Miyaura cross-coupling reactions. The biological activities of these coumarin derivatives were evaluated by means of alkaline phosphatase assay in the T47D human breast carcinoma cell line. Among the synthesized compounds, 36 (IC50 = 0.12 μM) and 38 (IC50 = 0.065 μM), bearing a five-membered heterocycle, showed potent PR antagonist activity. Competitive binding assay showed that compounds 8 and 34 have potent PR binding affinity. The fluorescence of compound 8 was dependent on the solvent properties and was increased in the presence of PR ligand binding domain. This property might be applicable to the development of fluorescence probes for studies on PR.
Co-reporter:Mayumi Kudo;Isao Azumaya;Hiroyuki Kagechika
Chirality 2011 Volume 23( Issue 1E) pp:E84-E90
Publication Date(Web):
DOI:10.1002/chir.21010
Abstract
Aromatic N,N′-dimethylated urea exists in (cis, cis) form, both in the crystal and in solution, and this structure can be utilized to construct intramolecular aromatic multilayered oligomers. These structures show helical conformation with all-R or all-S axis chirality, when the benzene rings are connected at the meta positions. To investigate the dynamic conformational behavior of such aromatic multilayered ureas in various solvents, we synthesized tetra(m-phenylurea) 3 bearing two chiral N-2-(methoxyethoxyethoxy)propyl groups and six N-methoxyethoxyethyl groups. The high solubility of compound 3 enabled its analysis in various solvents, including water. The CD spectra of compound 3 showed broad electronic absorption with high temperature-dependency, owing to the induction of handedness, in acetonitrile, chloroform, and methanol. In water, the CD signals of compound 3 indicated the presence of similar helical structure, but temperature-dependency was not observed. Chirality, 2011. © 2011 Wiley Periodicals, Inc.
Co-reporter:Mayumi Kudo, Takayuki Hanashima, Atsuya Muranaka, Hisako Sato, Masanobu Uchiyama, Isao Azumaya, Tomoya Hirano, Hiroyuki Kagechika and Aya Tanatani
The Journal of Organic Chemistry 2009 Volume 74(Issue 21) pp:8154-8163
Publication Date(Web):October 8, 2009
DOI:10.1021/jo901934r
The oligomeric aromatic ureas bearing N,N′-dimethylated urea bonds such as 3 have aromatic multilayered structure, based on the (cis,cis)-urea structure, and also have dynamic helical structure (all-R or all-S axis chirality) when the benzene rings are connected at the meta positions. The absolute helical structure of oligo(m-phenylurea)s were identified by the empirical and theoretical studies on the CD and vibrational CD (VCD) spectra. Thus, each enantiomer of the oligo(m-phenylurea)s 4 bearing a chiral N-2-(methoxyethoxyethoxy)propyl group were synthesized. Intense dispersion-type CD spectra of 4 were observed, which indicated the induction of handedness in the helical structure. In the VCD spectra of 4 in the film state, the signals due to the carbonyl and aromatic ring vibrations were seen with negative and positive values for compounds 4a and 4b, respectively. The calculations of both CD and VCD spectra of oligo(m-phenylurea)s 3 without any chiral N-substituent gave the same assignment about the axis chirality of 4. Thus, the absolute configurations of 4a and 4b are all-R and all-S structures, respectively.
Co-reporter:Ken-ichi Wakabayashi, Keisuke Imai, Hiroyuki Miyachi, Yuichi Hashimoto, Aya Tanatani
Bioorganic & Medicinal Chemistry 2008 Volume 16(Issue 14) pp:6799-6812
Publication Date(Web):15 July 2008
DOI:10.1016/j.bmc.2008.05.063
Various 4-(anilino)pyrrole-2-carboxamides were designed and synthesized as novel androgen receptor (AR) antagonists without steroidal or anilide structure, based on our strategy for developing full antagonists of nuclear receptors. Introduction of a bulky N-alkyl group, such as a cyclohexylmethyl or benzyl group, increased the binding affinity for wild-type AR and the potency for growth inhibition of androgen-dependent SC-3 cells. Among the compounds obtained, N-[4-[(benzyl)(4-nitrophenyl)amino]-1-methylpyrrole-2-carbonyl]pyrrolidine (22) is as potent an AR antagonist as the typical anilide-type AR antagonists hydroxyflutamide and bicalutamide. Further, compound 22 had potent binding affinity for T877A mutated AR, and dose-dependently inhibited the testosterone-induced production of prostate-specific antigen in LNCaP cells bearing T877A AR.Novel 4-(anilino)pyrrole-2-carboxamides were designed and synthesized as non-steroidal/non-anilide type AR antagonists.
Co-reporter:Mayumi Kudo, Victor Maurizot, Hyuma Masu, Aya Tanatani and Ivan Huc
Chemical Communications 2014 - vol. 50(Issue 70) pp:NaN10093-10093
Publication Date(Web):2014/07/08
DOI:10.1039/C4CC03822C
The synthesis and structural investigation of aromatic–aliphatic oligoamide foldamers reveals a zig-zag tape conformation with local conformational variability that precludes long range order.
Co-reporter:Mio Matsumura, Aya Tanatani, Isao Azumaya, Hyuma Masu, Daisuke Hashizume, Hiroyuki Kagechika, Atsuya Muranaka and Masanobu Uchiyama
Chemical Communications 2013 - vol. 49(Issue 23) pp:NaN2292-2292
Publication Date(Web):2012/11/19
DOI:10.1039/C2CC37583D
N,N′-Bis(2,3,7,8,12,13,17,18-octaethylporphyrin-5-yl)urea (3) exhibits cis–trans conformational switching depending on the solvent properties, and can adopt the cofacial porphyrin dimer structure under certain conditions. The conformational preference can be switched by electrochemical stimulus.
Co-reporter:Noriko Fujimoto, Mio Matsumura, Isao Azumaya, Shizuka Nishiyama, Hyuma Masu, Hiroyuki Kagechika and Aya Tanatani
Chemical Communications 2012 - vol. 48(Issue 40) pp:NaN4811-4811
Publication Date(Web):2012/02/22
DOI:10.1039/C2CC18177K
Chiral properties of bowl-shaped cyclic triamides bearing functional groups with hydrogen-bonding ability were examined. Chiral induction of cyclic triamide3a was observed by addition of chiral amine in solution, and chiral separation was achieved by simple crystallization to afford chiral capsule-type dimer structure of 4a.