Co-reporter:Judith Reichenbach, Stuart A. Ruddell, Mario González-Jiménez, Julio Lemes, David A. Turton, David J. France, and Klaas Wynne
Journal of the American Chemical Society May 31, 2017 Volume 139(Issue 21) pp:7160-7160
Publication Date(Web):May 16, 2017
DOI:10.1021/jacs.7b03036
Gigahertz- to terahertz-frequency infrared and Raman spectra contain a wealth of information concerning the structure, intermolecular forces, and dynamics of ionic liquids. However, these spectra generally have a large number of contributions ranging from slow diffusional modes to underdamped librations and intramolecular vibrational modes. This makes it difficult to isolate effects such as the role of Coulombic and hydrogen-bonding interactions. We have applied far-infrared and ultrafast optical Kerr effect spectroscopies on carefully selected ions with a greater or lesser degree of symmetry in order to isolate spectral signals of interest. This has allowed us to demonstrate the presence of longitudinal and transverse optical phonon modes and a great similarity of alkylammonium-based protic ionic liquids to liquid water. The data show that such phonon modes will be present in all ionic liquids, requiring a reinterpretation of their spectra.
Co-reporter:Gopakumar Ramakrishnan, Mario González-Jiménez, Adrian J. Lapthorn, and Klaas Wynne
The Journal of Physical Chemistry Letters July 6, 2017 Volume 8(Issue 13) pp:2964-2964
Publication Date(Web):June 14, 2017
DOI:10.1021/acs.jpclett.7b01127
Water dynamics in the solvation shell of solutes plays a very important role in the interaction of biomolecules and in chemical reaction dynamics. However, a selective spectroscopic study of the solvation shell is difficult because of the interference of the solute dynamics. Here we report on the observation of heavily slowed down water dynamics in the solvation shell of different solutes by measuring the low-frequency spectrum of solvation water, free from the contribution of the solute. A slowdown factor of ∼50 is observed even for relatively low concentrations of the solute. We go on to show that the effect can be generalized to different solutes including proteins.
Co-reporter:Gordon Hithell;Mario González-Jiménez;Gregory M. Greetham;Paul M. Donaldson;Michael Towrie;Anthony W. Parker;Glenn A. Burley;Neil T. Hunt
Physical Chemistry Chemical Physics 2017 vol. 19(Issue 16) pp:10333-10342
Publication Date(Web):2017/04/19
DOI:10.1039/C7CP00054E
Changes in the structural and solvation dynamics of a 15mer AT DNA duplex upon melting of the double-helix are observed by a combination of ultrafast two-dimensional infrared (2D-IR) and optical Kerr-effect (OKE) spectroscopies. 2D-IR spectroscopy of the vibrational modes of the DNA bases reveal signature off-diagonal peaks arising from coupling and energy transfer across Watson–Crick paired bases that are unique to double-stranded DNA (ds-DNA). Spectral diffusion of specific base vibrational modes report on the structural dynamics of the duplex and the minor groove, which is predicted to contain a spine of hydration. Changes in these dynamics upon melting are assigned to increases in the degree of mobile solvent access to the bases in single-stranded DNA (ss-DNA) relative to the duplex. OKE spectra exhibit peaks that are assigned to specific long-range phonon modes of ds- and ss-DNA. Temperature-related changes in these features correlate well with those obtained from the 2D-IR spectra although the melting temperature of the ds-DNA phonon band is slightly higher than that for the Watson–Crick modes, suggesting that a degree of long-range duplex structure survives the loss of Watson–Crick hydrogen bonding. These results demonstrate that the melting of ds-DNA disrupts helix-specific structural dynamics encompassing length scales ranging from mode delocalisation in the Watson–Crick base pairs to long-range phonon modes that extend over multiple base pairs and which may play a role in molecular recognition of DNA.
Co-reporter:Joanna Mosses, David A. Turton, Leo Lue, Jan Sefcik and Klaas Wynne
Chemical Communications 2015 vol. 51(Issue 6) pp:1139-1142
Publication Date(Web):28 Nov 2014
DOI:10.1039/C4CC07880B
Controlled induction of crystal nucleation is a highly desirable but elusive goal. Attempts to speed up crystallization, such as high super saturation or working near a liquid–liquid critical point, always led to irregular and uncontrollable crystal growth. Here, we show that under highly nonequilibrium conditions of spinodal decomposition, water crystals grow as thin wires in a template-less formation of “Haareis”. This suggests that such nonequilibrium conditions may be employed more widely as mechanisms for crystal growth control.
Co-reporter:Joanna Mosses; Christopher D. Syme
The Journal of Physical Chemistry Letters 2015 Volume 6(Issue 1) pp:38-43
Publication Date(Web):December 5, 2014
DOI:10.1021/jz5022763
Liquid–liquid transitions (LLTs) between amorphous phases of a single (chemically unchanged) liquid were predicted to occur in most molecular liquids but have only been observed in triphenyl phosphite (TPP) and n-butanol, and even these examples have been dismissed as “aborted crystallization”. One of the foremost reasons that LLTs remain so controversial is the lack of an obvious order parameter, that is, a physical parameter characterizing the phase transition. Here, using the technique of fluorescence lifetime imaging, we show for the first time that the LLT in TPP is characterized by a change in polarity linked to changes in molecular ordering associated with crystal polymorphs. We conclude that the LLT in TPP is a phase transition associated with frustrated molecular clusters, explaining the paucity of examples of LLTs seen in nature.
Co-reporter:Klaas Wynne and Neil T. Hunt
Physical Chemistry Chemical Physics 2012 vol. 14(Issue 18) pp:6154-6155
Publication Date(Web):12 Apr 2012
DOI:10.1039/C2CP90065C
A graphical abstract is available for this content
Co-reporter:Klaas Wynne and Neil T. Hunt
Physical Chemistry Chemical Physics 2012 - vol. 14(Issue 18) pp:NaN6155-6155
Publication Date(Web):2012/04/12
DOI:10.1039/C2CP90065C
Co-reporter:Joanna Mosses, David A. Turton, Leo Lue, Jan Sefcik and Klaas Wynne
Chemical Communications 2015 - vol. 51(Issue 6) pp:NaN1142-1142
Publication Date(Web):2014/11/28
DOI:10.1039/C4CC07880B
Controlled induction of crystal nucleation is a highly desirable but elusive goal. Attempts to speed up crystallization, such as high super saturation or working near a liquid–liquid critical point, always led to irregular and uncontrollable crystal growth. Here, we show that under highly nonequilibrium conditions of spinodal decomposition, water crystals grow as thin wires in a template-less formation of “Haareis”. This suggests that such nonequilibrium conditions may be employed more widely as mechanisms for crystal growth control.
Co-reporter:Gordon Hithell, Mario González-Jiménez, Gregory M. Greetham, Paul M. Donaldson, Michael Towrie, Anthony W. Parker, Glenn A. Burley, Klaas Wynne and Neil T. Hunt
Physical Chemistry Chemical Physics 2017 - vol. 19(Issue 16) pp:NaN10342-10342
Publication Date(Web):2017/04/06
DOI:10.1039/C7CP00054E
Changes in the structural and solvation dynamics of a 15mer AT DNA duplex upon melting of the double-helix are observed by a combination of ultrafast two-dimensional infrared (2D-IR) and optical Kerr-effect (OKE) spectroscopies. 2D-IR spectroscopy of the vibrational modes of the DNA bases reveal signature off-diagonal peaks arising from coupling and energy transfer across Watson–Crick paired bases that are unique to double-stranded DNA (ds-DNA). Spectral diffusion of specific base vibrational modes report on the structural dynamics of the duplex and the minor groove, which is predicted to contain a spine of hydration. Changes in these dynamics upon melting are assigned to increases in the degree of mobile solvent access to the bases in single-stranded DNA (ss-DNA) relative to the duplex. OKE spectra exhibit peaks that are assigned to specific long-range phonon modes of ds- and ss-DNA. Temperature-related changes in these features correlate well with those obtained from the 2D-IR spectra although the melting temperature of the ds-DNA phonon band is slightly higher than that for the Watson–Crick modes, suggesting that a degree of long-range duplex structure survives the loss of Watson–Crick hydrogen bonding. These results demonstrate that the melting of ds-DNA disrupts helix-specific structural dynamics encompassing length scales ranging from mode delocalisation in the Watson–Crick base pairs to long-range phonon modes that extend over multiple base pairs and which may play a role in molecular recognition of DNA.