Patrick H. Vaccaro

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Name: Vaccaro, Patrick H.
Organization: Yale University , USA
Department: Department of Chemistry
Title: (PhD)

TOPICS

Co-reporter:Priyanka Lahiri, Kenneth B. Wiberg, and Patrick H. Vaccaro
The Journal of Physical Chemistry A 2015 Volume 119(Issue 30) pp:8311-8327
Publication Date(Web):June 29, 2015
DOI:10.1021/acs.jpca.5b05177
The dispersive optical activity of (R)-(−)-glycidyl methyl ether (R-GME) has been interrogated under ambient vapor-phase and solution-phase conditions, with quantum-chemical analyses built on density functional (B3LYP and CAM-B3LYP) and coupled-cluster (CCSD) implementations of linear-response theory exploited to interpret experimental findings. Inherent flexibility of the heavy atom skeleton leads to nine low-lying structural isomers that possess distinct chiroptical and physicochemical properties, as evinced by marked changes in the magnitude and the sign of rotatory powers observed in various media. These species are interconverted by independent motion along two large-amplitude torsional coordinates and are stabilized differentially by interaction with the surroundings, thereby reapportioning their relative contributions to the collective response evoked from a thermally equilibrated ensemble. The intrinsic behavior exhibited by isolated (vapor-phase) R-GME molecules was calculated through use of both conformer-averaging and restricted vibrational-averaging procedures, the former affording moderately good agreement with measurements of optical rotatory dispersion (ORD) and the latter providing strong evidence for sizable effects arising from vibrational degrees of freedom. A similar conformer-averaging ansatz based on the polarizable-continuum model (PCM) for implicit solvation was deployed to elucidate R-GME specific-rotation parameters acquired for six dilute solutions. This approach gave reasonable predictions for sodium D-line (589.3 nm) experiments performed in the extremes of solvent polarity represented by cyclohexane and acetonitrile but failed to reproduce the overall shape of ORD profiles and suggested more complex processes might be involved in the case of an aromatic medium.
Co-reporter:Priyanka Lahiri; Kenneth B. Wiberg; Patrick H. Vaccaro;Dr. Marco Caricato; T. Daniel Crawford
Angewandte Chemie International Edition 2014 Volume 53( Issue 5) pp:1386-1389
Publication Date(Web):
DOI:10.1002/anie.201306339

Abstract

The anomalously large chiroptical response of (1R,4R)-norbornenone has been probed under complementary vapor-phase and solution-phase conditions to assess the putative roles of environmental perturbations. Measurements of the specific rotation for isolated (gas-phase) molecules could not be reproduced quantitatively by comprehensive quantum-chemical calculations based on density-functional or coupled-cluster levels of linear-response theory, which suggests that higher-order treatments may be needed to accurately predict such intrinsic behavior. A substantial, yet unexpected, dependence of the dispersive optical activity on the nature (phase) of the surrounding medium has been uncovered, with the venerable Lorentz local-field correction reproducing solvent-mediated trends in rotatory dispersion surprisingly well, whereas more modern polarizable continuum models for implicit solvation performed less satisfactorily.

Co-reporter:Priyanka Lahiri; Kenneth B. Wiberg; Patrick H. Vaccaro;Dr. Marco Caricato; T. Daniel Crawford
Angewandte Chemie 2014 Volume 126( Issue 5) pp:1410-1413
Publication Date(Web):
DOI:10.1002/ange.201306339

Abstract

The anomalously large chiroptical response of (1R,4R)-norbornenone has been probed under complementary vapor-phase and solution-phase conditions to assess the putative roles of environmental perturbations. Measurements of the specific rotation for isolated (gas-phase) molecules could not be reproduced quantitatively by comprehensive quantum-chemical calculations based on density-functional or coupled-cluster levels of linear-response theory, which suggests that higher-order treatments may be needed to accurately predict such intrinsic behavior. A substantial, yet unexpected, dependence of the dispersive optical activity on the nature (phase) of the surrounding medium has been uncovered, with the venerable Lorentz local-field correction reproducing solvent-mediated trends in rotatory dispersion surprisingly well, whereas more modern polarizable continuum models for implicit solvation performed less satisfactorily.

Co-reporter:Ulrich Hintermair ; Stafford W. Sheehan ; Alexander R. Parent ; Daniel H. Ess ; David T. Richens ; Patrick H. Vaccaro ; Gary W. Brudvig ;Robert H. Crabtree
Journal of the American Chemical Society 2013 Volume 135(Issue 29) pp:10837-10851
Publication Date(Web):July 3, 2013
DOI:10.1021/ja4048762
We present evidence for Cp* being a sacrificial placeholder ligand in the [Cp*IrIII(chelate)X] series of homogeneous oxidation catalysts. UV–vis and 1H NMR profiles as well as MALDI-MS data show a rapid and irreversible loss of the Cp* ligand under reaction conditions, which likely proceeds through an intramolecular inner-sphere oxidation pathway reminiscent of the reductive in situ elimination of diolefin placeholder ligands in hydrogenation catalysis by [(diene)MI(L,L′)]+ (M = Rh and Ir) precursors. When oxidatively stable chelate ligands are bound to the iridium in addition to the Cp*, the oxidized precursors yield homogeneous solutions with a characteristic blue color that remain active in both water- and CH-oxidation catalysis without further induction period. Electrophoresis suggests the presence of well-defined Ir-cations, and TEM-EDX, XPS, 17O NMR, and resonance-Raman spectroscopy data are most consistent with the molecular identity of the blue species to be a bis-μ-oxo di-iridium(IV) coordination compound with two waters and one chelate ligand bound to each metal. DFT calculations give insight into the electronic structure of this catalyst resting state, and time-dependent simulations agree with the assignments of the experimental spectroscopic data. [(cod)IrI(chelate)] precursors bearing the same chelate ligands are shown to be equally effective precatalysts for both water- and CH-oxidations using NaIO4 as chemical oxidant.
Co-reporter:Kenneth B. Wiberg;Marco Caricato;Yi-Gui Wang
Chirality 2013 Volume 25( Issue 10) pp:606-616
Publication Date(Web):
DOI:10.1002/chir.22184

ABSTRACT

It has been recognized that quantum-chemical predictions of dispersive (nonresonant) chiroptical phenomena are exquisitely sensitive to the periphery of the electronic wavefunction. To further elaborate and potentially exploit this assertion, linear-response calculations of specific optical rotation were performed within the framework of density-functional theory (DFT) by augmenting small basis sets (e.g., STO - 3G and 3 - 21G) for the core and valence electrons with diffuse functions taken from substantially larger bases (e.g., aug-cc-pVXZ where X = D, T, or Q). Of particular interest was the ability of such computationally efficient (augmented small-basis) model chemistries to reproduce results derived from more expensive (canonical large-basis) schemes. The results appear to be quite promising, with the augmented minimal-basis ansatz often yielding wavelength-resolved rotatory powers close to those deduced from standard DFT(B3LYP)/aug-cc-pVXZ treatments. Analogous linear-response analyses were performed by means of coupled-cluster singles and doubles (CCSD) theory, once again leading to augmented small-basis estimates of specific rotation in reasonable accord with their large-basis counterparts. Although CCSD predictions were deemed to be slightly worse than those obtained from DFT, they still were of sufficient quality for such reduced-basis calculations to be considered viable for exploratory work. Chirality 25:606–616, 2013. © 2013 Wiley Periodicals, Inc.

Co-reporter:Kathryn Chew, Deacon J. Nemchick, and Patrick H. Vaccaro
The Journal of Physical Chemistry A 2013 Volume 117(Issue 29) pp:6126-6142
Publication Date(Web):March 18, 2013
DOI:10.1021/jp400160z
The origin band of the Ã1B2–X̃1A1 (π* ← π) absorption system in monodeuterated tropolone (TrOD) has been probed with near-rotational resolution by applying the frequency-domain techniques of polarization-resolved degenerate four-wave mixing (DFWM) spectroscopy under ambient, bulk-gas conditions. Judicious selection of polarization geometries for the incident and detected electromagnetic waves alleviated intrinsic spectral congestion and facilitated dissection of overlapping transitions, thereby enabling refined rotational-tunneling parameters to be extracted for the Ã1B2(π*π) manifold. A tunneling-induced bifurcation of Δ0Ã = 2.241(14) cm–1 was measured for the zero-point level of electronically excited TrOD, reflecting the presence of a substantial barrier along the O–D···O ↔ O···D–O reaction coordinate and representing nearly a 10-fold decrease in magnitude over the analogous quantity in the parent (TrOH) isotopologue. Observed trends in hydron-migration rates are discussed in light of the changes in the potential-surface topology sustained from the π* ← π electron promotion and the dynamical effects incurred by selective isotopic modification of the nuclear framework, with similar considerations being applied to interpret rotational constants and inertial defects. Simultaneous analyses performed on an interloping sequence band built upon ν38(b1) gave an excited-state tunneling splitting of Δν38Ã = 1.217(61) cm–1, highlighting the ability of this symmetric, out-of-plane normal mode to inhibit the unimolecular tautomerization process.
Co-reporter:Priyanka Lahiri, Kenneth B. Wiberg, and Patrick H. Vaccaro
The Journal of Physical Chemistry A 2013 Volume 117(Issue 47) pp:12382-12400
Publication Date(Web):October 24, 2013
DOI:10.1021/jp4089194
The optical rotatory dispersion of two monocyclic ketones, (R)-3-methylcyclopentanone [R-3MCP] and (R)-3-methylcyclohexanone [R-3MCH], has been investigated under isolated and solvated conditions to explore the role of ring size/morphology and to elucidate the impact of environmental perturbations. Vapor-phase measurements of specific rotation, [α]λT, were performed at 355/633 nm by means of cavity ring-down polarimetry while complementary solution-phase work employed a canonical discrete-wavelength polarimeter to probe five distinct solvents. The magnitude of [α]λT was found to increase upon solvation, albeit to different extents for the two species of interest, with the attendant sign switching between the solution and vapor phases for λ ≥ 510.7 nm in the case of R-3MCH. Quantum-chemical analyses suggest two low-lying conformers to exist for each ketone, distinguished by an equatorial or axial arrangement of the methyl substituent. Linear-response calculations built upon density-functional [DFT(B3LYP)/aug-cc-pVTZ] and coupled-cluster [CCSD/aug-cc-pVDZ] frameworks gave antagonistic chiroptical parameters for these isomers, which were combined with various energy metrics in a conformer-averaging ansatz to simulate the response for a thermally equilibrated ensemble. The intrinsic behavior of R-3MCP was reproduced best by averaging DFT optical-activity predictions according to relative populations deduced from free-energy differences; however, less satisfactory agreement was realized for isolated R-3MCH molecules. The sizable circular birefringence of R-3MCP can be attributed to inherent chirality of its twisted carbon ring whereas the more modest response of R-3MCH stems mainly from the lone stereogenic center. The implicit polarizable continuum model treated solvation effects in R-3MCP with moderate success, but failed to replicate solvent-dependent trends in R-3MCH. The relationship of dispersive optical activity to bulk characteristics of the surrounding medium, including dielectric constant, refractive index, and polarizability, is discussed with the goal of bridging the gap between isolated and solvated chiroptical properties.
Co-reporter:Priyanka Lahiri, Kenneth B. Wiberg, and Patrick H. Vaccaro
The Journal of Physical Chemistry A 2012 Volume 116(Issue 38) pp:9516-9533
Publication Date(Web):August 13, 2012
DOI:10.1021/jp303270d
The specific rotation for two isomeric members of the terpene family, (S)-(+)-2-carene and (S)-(+)-3-carene, has been investigated under complementary solvated and isolated conditions, where the latter vapor-phase work has been performed at excitation wavelengths of 355 and 633 nm by means of ultrasensitive cavity ring-down polarimetry (CRDP). Linear-response computations of dispersive optical activity built upon analogous density-functional (B3LYP/aug-cc-pVTZ) and coupled-cluster (CCSD/aug-cc-pVDZ) levels of theory have been enlisted to unravel the structural and electronic origins of observed behavior. The six-membered portion of the bicyclic skeleton in the nominally rigid 3-carene system is predicted to be near-planar in nature, with calculated and measured rotatory powers for the isolated (gas-phase) species shown to be in excellent agreement. In contrast, the inherent flexibility of 2-carene gives rise to two quasidegenerate conformations that are interconnected by a large-amplitude ring-puckering motion and exhibit antagonistic chiroptical properties. Various approaches to simulate the intrinsic response evoked from a thermally equilibrated ensemble of gaseous (S)-(+)-2-carene molecules have been considered, including implicit averaging over independent conformers and explicit (albeit restricted) averaging over nuclear degrees of freedom. A polarizable continuum model for implicit solvation was found to describe solvent-dependent trends reasonably well in the case of (S)-(+)-2-carene, but failed to reproduce the specific-rotation patterns emerging from polarimetric studies of (S)-(+)-3-carene.
Co-reporter:Daniel Murdock, Lori A. Burns and Patrick H. Vaccaro  
Physical Chemistry Chemical Physics 2010 vol. 12(Issue 29) pp:8285-8299
Publication Date(Web):21 Jun 2010
DOI:10.1039/C003140B
The vibrational dependence of large-amplitude proton transfer taking place in the ground electronic state (1A1) of tropolone has been explored by implementing a coherent variant of the stimulated emission pumping (SEP) technique within the framework of two-color resonant four-wave mixing (TC-RFWM) spectroscopy. The lowest 1700 cm−1 portion of this potential surface has been interrogated under ambient bulk-gas conditions, enabling rotationless term energies (Tv+) and tunneling-induced bifurcations to be extracted for 43 assigned vibrational features of a1 and b2 symmetry. The resulting values of reflect the state-specificity long attributed to the hydron-migration pathways of tropolone and range in magnitude from 0.0 cm−1 to 17.8 cm−1, where the former implies essentially complete quenching of unimolecular dynamics whilst the latter represents nearly a twenty-fold increase in reaction rate over that of the zero-point level. This vibrational mediation of tunneling behavior is discussed in terms of attendant atomic displacements and permutation-inversion symmetries, with choreographed motion of the five-member reaction site () found to exert the most significant influence on the efficacy of proton transfer.
Co-reporter:Chandrima Chatterjee, Christopher D. Incarvito, Lori A. Burns and Patrick H. Vaccaro
The Journal of Physical Chemistry A 2010 Volume 114(Issue 24) pp:6630-6640
Publication Date(Web):May 27, 2010
DOI:10.1021/jp101224e
The ground electronic state (X̃1A1) of hexafluoroacetylacetone (HFAA) has been subjected to synergistic experimental and theoretical investigations designed to resolve controversies surrounding the nature of intramolecular hydrogen bonding for the enol tautomer. Cryogenic (93K) X-ray diffraction studies were conducted on single HFAA crystals grown in situ by means of the zone-melting technique, with the resulting electron density maps affording clear evidence for distinguishable O1−H and H···O2 bonds that span an interoxygen distance of 2.680 ± 0.003 Å. Such laboratory findings have been corroborated by a variety of quantum chemical methods including Hartree−Fock (HF), density functional [DFT (B3LYP)], Møller−Plesset perturbation (MPn), and coupled cluster [CCSD, CCSD(T)] treatments built upon extensive sets of correlation-consistent basis functions. Geometry optimizations performed at the CCSD(T)/aug-cc-pVDZ level of theory predict an asymmetric (Cs) equilibrium configuration characterized by an O···O donor−acceptor separation of 2.628 Å. Similar analyses of the transition state for proton transfer reveal a symmetric (C2v) structure that presents a potential barrier of 21.29 kJ/mol (1779.7 cm−1) height. The emerging computational description of HFAA is in reasonable accord with crystallographic measurements and suggests a weakening of hydrogen-bond strength relative to that of the analogous acetylacetone molecule.
Co-reporter:Daniel Murdock, Lori A. Burns and Patrick H. Vaccaro
The Journal of Physical Chemistry A 2009 Volume 113(Issue 47) pp:13184-13198
Publication Date(Web):August 11, 2009
DOI:10.1021/jp903970d
A synergistic theoretical and experimental investigation of stimulated emission pumping (SEP) as implemented in the coherent framework of two-color resonant four-wave mixing (TC-RFWM) spectroscopy is presented, with special emphasis directed toward the identification of polarization geometries that can distinguish spectral features according to their attendant changes in rotational quantum numbers. A vector-recoupling formalism built upon a perturbative treatment of matter-field interactions and a state-multipole expansion of the density operator allowed the weak-field signal intensity to be cast in terms of a TC-RFWM response tensor, RQ(K)(ε4*ε3ε2*ε1;Jg,Je,Jh,Jf), which separates the transverse characteristics of the incident and generated electromagnetic waves (ε4*ε3ε2*ε1) from the angular momentum properties of the PUMP and DUMP resonances (Jg,Je,Jh,Jf). For an isolated SEP process induced in an isotropic medium, the criteria needed to discriminate against subsets of rovibronic structure were encoded in the roots of a single tensor element, R0(0)(ε4*ε3ε2*ε1;Jg,Je,Jh,Je). By assuming all optical fields to be polarized linearly and invoking the limit of high quantum numbers, specific angles of polarization for the detected signal field were found to suppress DUMP resonances selectively according to the nature of their rotational branch and the rotational branch of the meshing PUMP line. These predictions were corroborated by performing SEP measurements on the ground electronic potential energy surface of tropolone in two distinct regimes of vibrational excitation, with the near-ultraviolet Ã1B2−X̃1A1 (π* ← π) absorption system affording the requisite PUMP and DUMP transitions.
Co-reporter:Shaun M. Wilson;Kenneth B. Wiberg;Michael J. Murphy
Chirality 2008 Volume 20( Issue 3-4) pp:357-369
Publication Date(Web):
DOI:10.1002/chir.20448

Abstract

The vapor-phase optical rotation (or circular birefringence) of (S)-1,2-epoxybutane, (S)-epichlorohydrin, and (S)-epifluorohydrin has been measured at the nonresonant excitation wavelengths of 355 nm and 633 nm by means of Cavity Ring-Down Polarimetry (CRDP). Complementary solution-phase studies were performed in a wide variety of dilute solvent media to highlight the pronounced influence of solute–solvent interactions. Density functional theory calculations of optical activity have been enlisted to unravel the structural and electronic provenance of experimental observations. Three stable, low-lying conformers have been identified and characterized for each of the targeted chiral species, with thermal (relative population weighted) averaging of their antagonistic chiroptical properties allowing specific rotation values to be predicted under both isolated and solvated conditions. For (S)-epichlorohydrin and (S)-epifluorohydrin, a self-consistent isodensity polarizable continuum model (SCI-PCM) has been exploited to gain further insight into the underlying nature of solvation effects. Chirality, 2008. © 2007 Wiley-Liss, Inc.

Co-reporter:F. Pérez-Bernal, L.F. Santos, P.H. Vaccaro, F. Iachello
Chemical Physics Letters 2005 Volume 414(4–6) pp:398-404
Publication Date(Web):14 October 2005
DOI:10.1016/j.cplett.2005.07.119

Abstract

An algebraic scheme is proposed to explore the influence of nonrigidity upon spectroscopic (infrared/Raman) transitions. Application of this approach to large amplitude bending motion relies upon a Hamiltonian that embodies both rigidly-linear and rigidly-bent behavior, with the attendant U(3) dynamical algebra uniformly describing all pertinent operators. The bending mode supported by the quasilinear carbon trimer (C3) is investigated, yielding algebraic predictions for vibrational energy level patterns and infrared transition matrix elements that are in reasonable accord with their ab initio counterparts. A coherent state formalism is employed to extract dependence of potential energy and dipole moment functions on C3 bending coordinate.

Co-reporter:F. Iachello, F. Pérez-Bernal, P.H. Vaccaro
Chemical Physics Letters 2003 Volume 375(3–4) pp:309-320
Publication Date(Web):3 July 2003
DOI:10.1016/S0009-2614(03)00851-0
An algebraic scheme for describing nonrigid polyatomic molecules is introduced and used to characterize bending motion in ‘floppy’ triatomic/tetratomic species. The salient features of quasi-linear and quasi-bent molecules are classified systematically. In particular, the (ν5) bending vibration supported by the ground electronic state of fulminic acid (HCNO/DCNO) is shown to exhibit the predicted behavior for nonrigidity. Likewise, the (ν2) bending motion of magnesium hydroxide (MgOH/MgOD) demonstrates quantitative application of this novel approach to problems of spectroscopic interest. Effective potential energy functions for these large-amplitude degrees of freedom are extracted by exploiting the method of coherent states.
Co-reporter:H. Ishikawa, H. Toyosaki, N. Mikami, F. Pérez-Bernal, P.H. Vaccaro, F. Iachello
Chemical Physics Letters 2002 Volume 365(1–2) pp:57-68
Publication Date(Web):28 October 2002
DOI:10.1016/S0009-2614(02)01419-7
Emission spectra obtained from bulk-gas methinophosphide (HCP) have been interpreted by means of a Lie algebraic theory that describes explicit non-rigidity of the molecular framework. Fluorescence accompanying selective excitation of vibronic bands was dispersed under moderate resolution, with substantial activity of the ν2 H–C–P bending mode reflecting the bent-from-linear nature of the transition. Aside from furnishing an economical parameterization for energy level patterns, the algebraic treatment permits Franck–Condon intensities to be evaluated quantitatively. The equilibrium structure deduced for the state is in good accord with quantum chemistry calculations except for substantially less than predicted elongation of the C–P bond upon electron promotion.
Co-reporter:T. Müller, P.H. Vaccaro, F. Pérez-Bernal, F. Iachello
Chemical Physics Letters 2000 Volume 329(3–4) pp:271-282
Publication Date(Web):20 October 2000
DOI:10.1016/S0009-2614(00)01004-6
Cavity ring-down spectroscopy (CRDS) has been employed to probe the absorption system of jet-cooled disulfur monoxide (S2O) molecules. Vibronically resolved features possessing up to 8 quanta of excitation in the ν2′ S–S stretching mode of the C̃ state have been characterized, with the onset of rapid predissociation for v2′⩾4 being manifest in the widths of band contours. Measured vibronic intensities are in good accord with predictions derived from a Lie algebraic (or vibron) treatment of Franck–Condon factors for the corresponding S2O emission spectrum.
Co-reporter:Daniel Murdock, Lori A. Burns and Patrick H. Vaccaro
Physical Chemistry Chemical Physics 2010 - vol. 12(Issue 29) pp:NaN8299-8299
Publication Date(Web):2010/06/21
DOI:10.1039/C003140B
The vibrational dependence of large-amplitude proton transfer taking place in the ground electronic state (1A1) of tropolone has been explored by implementing a coherent variant of the stimulated emission pumping (SEP) technique within the framework of two-color resonant four-wave mixing (TC-RFWM) spectroscopy. The lowest 1700 cm−1 portion of this potential surface has been interrogated under ambient bulk-gas conditions, enabling rotationless term energies (Tv+) and tunneling-induced bifurcations to be extracted for 43 assigned vibrational features of a1 and b2 symmetry. The resulting values of reflect the state-specificity long attributed to the hydron-migration pathways of tropolone and range in magnitude from 0.0 cm−1 to 17.8 cm−1, where the former implies essentially complete quenching of unimolecular dynamics whilst the latter represents nearly a twenty-fold increase in reaction rate over that of the zero-point level. This vibrational mediation of tunneling behavior is discussed in terms of attendant atomic displacements and permutation-inversion symmetries, with choreographed motion of the five-member reaction site () found to exert the most significant influence on the efficacy of proton transfer.
3-Penten-2-one, 1,1,1,5,5,5-hexafluoro-4-hydroxy-, (3Z)-
2-PYRIDIN-2-YL-PROPAN-2-OL
Bicyclo[2.2.1]heptan-2-ol, 2-acetate, (1R,2R,4S)-rel-
Bicyclo[2.2.1]heptan-2-ol, (1R,2R,4S)-
2,3-Pentadiene, (2S)- (9CI)
Bicyclo[2.2.1]hept-5-en-2-one, (1R,4R)-
Cyclopentanone,3-methyl-, (3R)-
Bicyclo[4.1.0]hept-2-ene,3,7,7-trimethyl-, (1S,6R)-
Bicyclo[2.2.1]hept-2-en-7-one