Co-reporter:Tian Tian; Yanyan Song; Jiaqi Wang; Boshi Fu; Zhiyong He; Xianqun Xu; Anling Li; Xin Zhou; Shaoru Wang;Xiang Zhou
Journal of the American Chemical Society 2016 Volume 138(Issue 3) pp:955-961
Publication Date(Web):January 7, 2016
DOI:10.1021/jacs.5b11532
The fine control of enzyme activity is essential for the regulation of many important cellular and organismal functions. The light-regulation of proteins serves as an important method for the spatiotemporal control over the production and degradation of an enzyme product. This area is of intense interest for researchers. To the best of our knowledge, the use of small molecules as light-triggered molecular switches to reversibly control enzyme activity at the protein level has not yet been studied. In the present study, we demonstrate the light-controlled reversible regulation of the enzyme using a small-molecule-triggered switch, which is based on molecular recognition between an azobenzene derivative and telomere DNA. This molecule interconverts between the trans and cis states under alternate 365 nm UV and visible light irradiation, which consequently triggers the compaction and extension of telomere DNA. We further provide direct evidence for this structural switch using a circular dichroism study. Furthermore, our strategy has been successfully used to effectively control blood clotting in human plasma.
Co-reporter:Boshi Fu, Jinguo Huang, Yuqi Chen, Yafen Wang, Tianrui Xue, GuoHua Xu, Shaoru Wang and Xiang Zhou
Chemical Communications 2016 vol. 52(Issue 65) pp:10052-10055
Publication Date(Web):14 Jul 2016
DOI:10.1039/C6CC04866H
Herein, we report two distinct G-quadruplex conformations of the same G-rich oligonucleotide, regulated by a small molecule. This is the first report in which both right- and left-handed G-quadruplex conformations have been obtained from the same sequence. We discriminated these two distinct conformations and investigated their kinetics and thermodynamics.
Co-reporter:Tian Tian, Heng Xiao, Xiaolian Zhang, Shuang Peng, Xiaoe Zhang, Shan Guo, Shaoru Wang, Songmei Liu, Xin Zhou, Craig Meyers and Xiang Zhou
Chemical Communications 2013 vol. 49(Issue 1) pp:75-77
Publication Date(Web):05 Nov 2012
DOI:10.1039/C2CC36728A
We reported an efficient strategy based on a strand displacement amplification for serum miRNA detection. In such a system, a multiplexed, sensitive and quick detection of miRNAs could be achieved through a combination of fluorescence labeled probes, a common primer and a polymerase. This could be potentially used in the clinical field to achieve early disease diagnosis and prognosis.
Co-reporter:Tian Tian, Shuang Peng, Heng Xiao, Xiaoe Zhang, Shan Guo, Shaoru Wang, Xiang Zhou, Songmei Liu and Xin Zhou
Chemical Communications 2013 vol. 49(Issue 26) pp:2652-2654
Publication Date(Web):11 Feb 2013
DOI:10.1039/C3CC38818B
The present study demonstrated a highly sensitive strategy for measuring telomerase activity in cell extracts. Furthermore, we applied the new strategy for in situ detection of telomerase at the cellular level in cancer cells, together with a normal cell as the negative control.
Co-reporter:Tian Tian, Xiaoe Zhang, Boshi Fu, Yuelin Long, Shuang Peng, Shaoru Wang, Xiang Zhou and Xin Zhou
Chemical Communications 2013 vol. 49(Issue 85) pp:9968-9970
Publication Date(Web):20 Aug 2013
DOI:10.1039/C3CC45423A
We have conducted the first systematic investigation of DNAs with modified cytosines, including 5-methylcytosine (5mC), 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC) and 5-carboxylcytosine (5caC), under hot alkali treatment.
Co-reporter:Tian Tian, Shuang Peng, Heng Xiao, Yuelin Long, Boshi Fu, Xiaoe Zhang, Shan Guo, Shaoru Wang, Xiang Zhou, Songmei Liu and Xin Zhou
Chemical Communications 2013 vol. 49(Issue 86) pp:10085-10087
Publication Date(Web):05 Sep 2013
DOI:10.1039/C3CC44017F
Here, we first demonstrated that 5-MedCTP could be incorporated into the synthetic DNA template by the exonuclease deficient Klenow fragment with a much higher efficiency than dCTP and 5-hydroxymethyl-dCTP. Further, we first conducted a comparable study of primer extension reaction using templates containing deoxycytidine (dC) or 5-methyldeoxycytidine (5-mdC) for incorporating different triphosphates. Based on our findings, 5-methyldeoxycytidine could enhance the substrate activity of the Klenow fragment (exo-) and this feature could potentially be used in DNA methylation analysis.
Co-reporter:Dr. Tian Tian;Heng Xiao;Zhengan Zhang;Yuelin Long;Shuang Peng;Dr. Shaoru Wang;Dr. Xiang Zhou;Dr. Songmei Liu; Xin Zhou
Chemistry - A European Journal 2013 Volume 19( Issue 1) pp:92-95
Publication Date(Web):
DOI:10.1002/chem.201203344
Co-reporter:Tian Tian, Heng Xiao, Yuelin Long, Xiaoe Zhang, Shaoru Wang, Xiang Zhou, Songmei Liu and Xin Zhou
Chemical Communications 2012 vol. 48(Issue 80) pp:10031-10033
Publication Date(Web):23 Aug 2012
DOI:10.1039/C2CC35648A
The analysis of DNA methylation and MTase (methyltransferase) activity is important in epigenetic study. We have developed a novel strategy for sensitive analysis of MTase activity based on a hairpin shaped DNAzyme; 8–17 DNAzyme amplicon has been adopted and found to be very effective in such analysis.
Co-reporter:Boshi Fu, Jinguo Huang, Yuqi Chen, Yafen Wang, Tianrui Xue, GuoHua Xu, Shaoru Wang and Xiang Zhou
Chemical Communications 2016 - vol. 52(Issue 65) pp:NaN10055-10055
Publication Date(Web):2016/07/14
DOI:10.1039/C6CC04866H
Herein, we report two distinct G-quadruplex conformations of the same G-rich oligonucleotide, regulated by a small molecule. This is the first report in which both right- and left-handed G-quadruplex conformations have been obtained from the same sequence. We discriminated these two distinct conformations and investigated their kinetics and thermodynamics.
Co-reporter:Tian Tian, Xiaoe Zhang, Boshi Fu, Yuelin Long, Shuang Peng, Shaoru Wang, Xiang Zhou and Xin Zhou
Chemical Communications 2013 - vol. 49(Issue 85) pp:NaN9970-9970
Publication Date(Web):2013/08/20
DOI:10.1039/C3CC45423A
We have conducted the first systematic investigation of DNAs with modified cytosines, including 5-methylcytosine (5mC), 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC) and 5-carboxylcytosine (5caC), under hot alkali treatment.
Co-reporter:Tian Tian, Shuang Peng, Heng Xiao, Yuelin Long, Boshi Fu, Xiaoe Zhang, Shan Guo, Shaoru Wang, Xiang Zhou, Songmei Liu and Xin Zhou
Chemical Communications 2013 - vol. 49(Issue 86) pp:NaN10087-10087
Publication Date(Web):2013/09/05
DOI:10.1039/C3CC44017F
Here, we first demonstrated that 5-MedCTP could be incorporated into the synthetic DNA template by the exonuclease deficient Klenow fragment with a much higher efficiency than dCTP and 5-hydroxymethyl-dCTP. Further, we first conducted a comparable study of primer extension reaction using templates containing deoxycytidine (dC) or 5-methyldeoxycytidine (5-mdC) for incorporating different triphosphates. Based on our findings, 5-methyldeoxycytidine could enhance the substrate activity of the Klenow fragment (exo-) and this feature could potentially be used in DNA methylation analysis.
Co-reporter:Tian Tian, Heng Xiao, Xiaolian Zhang, Shuang Peng, Xiaoe Zhang, Shan Guo, Shaoru Wang, Songmei Liu, Xin Zhou, Craig Meyers and Xiang Zhou
Chemical Communications 2013 - vol. 49(Issue 1) pp:NaN77-77
Publication Date(Web):2012/11/05
DOI:10.1039/C2CC36728A
We reported an efficient strategy based on a strand displacement amplification for serum miRNA detection. In such a system, a multiplexed, sensitive and quick detection of miRNAs could be achieved through a combination of fluorescence labeled probes, a common primer and a polymerase. This could be potentially used in the clinical field to achieve early disease diagnosis and prognosis.
Co-reporter:Tian Tian, Shuang Peng, Heng Xiao, Xiaoe Zhang, Shan Guo, Shaoru Wang, Xiang Zhou, Songmei Liu and Xin Zhou
Chemical Communications 2013 - vol. 49(Issue 26) pp:NaN2654-2654
Publication Date(Web):2013/02/11
DOI:10.1039/C3CC38818B
The present study demonstrated a highly sensitive strategy for measuring telomerase activity in cell extracts. Furthermore, we applied the new strategy for in situ detection of telomerase at the cellular level in cancer cells, together with a normal cell as the negative control.
Co-reporter:Tian Tian, Heng Xiao, Yuelin Long, Xiaoe Zhang, Shaoru Wang, Xiang Zhou, Songmei Liu and Xin Zhou
Chemical Communications 2012 - vol. 48(Issue 80) pp:NaN10033-10033
Publication Date(Web):2012/08/23
DOI:10.1039/C2CC35648A
The analysis of DNA methylation and MTase (methyltransferase) activity is important in epigenetic study. We have developed a novel strategy for sensitive analysis of MTase activity based on a hairpin shaped DNAzyme; 8–17 DNAzyme amplicon has been adopted and found to be very effective in such analysis.