Co-reporter:Naoki Kanoh;Toshitaka Okamura;Takahiro Suzuki;Yoshiharu Iwabuchi
Organic & Biomolecular Chemistry 2017 vol. 15(Issue 34) pp:7190-7195
Publication Date(Web):2017/08/30
DOI:10.1039/C7OB01587A
A two-step method for introducing a propargyl group in aromatic bioactive small molecules has been developed. This method features propargylation of aromatic groups using a cationic propargyl hexacarbonyl complex in the presence of cesium carbonate, and decomplexation of the resultant cobalt complexes using 2,2,6,6-tetramethylpiperidine-1-oxoammonium tetrafluoroborate. These reactions proceed under mild conditions, and thus are applicable for acid- and/or oxidant-sensitive aromatic bioactive small molecules.
Co-reporter:Naoki Kanoh
Natural Product Reports 2016 vol. 33(Issue 5) pp:709-718
Publication Date(Web):24 Feb 2016
DOI:10.1039/C5NP00117J
Covering: up to the end of 2015
A photo-cross-linked small-molecule affinity matrix is a unique platform for identifying targets for bioactive small molecules. It utilises a photogenerated carbene species to immobilise a variety of bioactive small molecules on an affinity matrix in a chemo- and site-nonselective manner. Although this platform would seem to run counter to the more typical approach of small-molecule immobilisation on an affinity matrix (i.e., selective coupling), it has been successfully utilised in the past decade to screen protein targets for many bioactive small molecules. This review describes the status of the photo-cross-linking methodology while providing a useful tutorial for academic and industrial chemical biologists who are involved or interested in drug target identification.
Co-reporter:Tomohiro Itagaki, Ayano Kawamata, Miho Takeuchi, Keisuke Hamada, Yoshiharu Iwabuchi, Tadashi Eguchi, Fumitaka Kudo, Takeo Usui and Naoki Kanoh
The Journal of Antibiotics 2016 69(4) pp:287-293
Publication Date(Web):January 27, 2016
DOI:10.1038/ja.2015.148
Unified synthesis of FD-891 analogs and their structure–activity relationship are described. By using stereoselective allylation/crotylation and Evans aldol chemistry, six side-chain fragments having different length and terminus were synthesized. These fragments were coupled with a macrolactone fragment, improved synthesis of which was also developed here, to generate FD-891 and five truncated analogs. These synthetic compounds as well as three analogs obtained from fermentation of gene-disrupted Streptomyces graminofaciens mutants were tested for in vitro cytotoxic activity against HeLa cells. As a result, coexistence of the C8–C9 epoxide and side-chain terminus was found to be critical for the cytotoxic activity.
Co-reporter:Dr. Naoki Kanoh;Shunya Itoh;Kohei Fujita;Dr. Kohei Sakanishi;Ryosuke Sugiyama;Yuta Terajima;Dr. Yoshiharu Iwabuchi;Dr. Shinichi Nishimura;Dr. Hideaki Kakeya
Chemistry - A European Journal 2016 Volume 22( Issue 25) pp:8586-8595
Publication Date(Web):
DOI:10.1002/chem.201600569
Abstract
Heronamides are biosynthetically related metabolites isolated from marine-derived actinomycetes. Heronamide C shows potent antifungal activity by targeting membrane phospholipids possessing saturated hydrocarbon chains with as-yet-unrevealed modes of action. In spite of their curious hypothesized biosynthesis and fascinating biological activities, there have been conflicts in regard to the reported stereochemistries of heronamides. Here, we describe the asymmetric total synthesis of the originally proposed and revised structures of heronamide C, which unambiguously confirmed the chemical structure of this molecule. We also demonstrated nonenzymatic synthesis of heronamides A and B from heronamide C, which not only proved the postulated biosynthesis, but also confirmed the correct structures of heronamides A and B. Investigation of the structure–activity relationship of synthetic and natural heronamides revealed the importance of both long-range stereochemical communication and the 20-membered macrolactam ring for the biological activity of these compounds.
Co-reporter:Takahiro Suzuki, Toshitaka Okamura, Takenori Tomohiro, Yoshiharu Iwabuchi, and Naoki Kanoh
Bioconjugate Chemistry 2015 Volume 26(Issue 3) pp:389
Publication Date(Web):February 10, 2015
DOI:10.1021/bc500559e
The third generation of photoactivatable beads designed to capture bioactive small molecules in a chemo- and site-nonselective manner upon irradiation at 365 nm of UV light and release them as coumarin conjugates after exposure to UV light of 302 nm is described. These photoactivatable and photocleavable beads enable quantification of the amount and distribution of immobilized small molecules prior to the pull-down experiments to identify target protein(s) for the immobilized small molecules. The newly developed system was then used to analyze the functional group compatibility of the photo-cross-linking technology as well as the preferable nature of small molecules to be immobilized. As a result, compounds having a hydroxyl group, carboxylic acid, or aromatic ring were shown to give multiple conjugates, indicating that these compounds are well compatible with the photoactivatable beads system.
Co-reporter:Naoki Kanoh, Ayano Kawamata, Tomohiro Itagaki, Yuta Miyazaki, Kenzo Yahata, Eunsang Kwon, and Yoshiharu Iwabuchi
Organic Letters 2014 Volume 16(Issue 19) pp:5216-5219
Publication Date(Web):September 23, 2014
DOI:10.1021/ol502633j
A concise and unified strategy for the synthesis of C1–C18 macrolactone fragments of FD-891 and FD-892 as well as their analogues is reported. The strategy includes a stereoselective vinylogous Mukaiyama aldol reaction (VMAR) using chiral silyl ketene N,O-acetal to construct C6–C7 stereocenters, an E-selective ring closing metathesis to construct a C12–C13 olefin, and stereodivergent construction of a C8–C9 epoxide.
Co-reporter:Kohei Sakanishi;Shunya Itoh;Ryosuke Sugiyama;Shinichi Nishimura;Hideaki Kakeya;Yoshiharu Iwabuchi
European Journal of Organic Chemistry 2014 Volume 2014( Issue 7) pp:1376-1380
Publication Date(Web):
DOI:10.1002/ejoc.201301487
Abstract
The total synthesis of the proposed structure of heronamide C was accomplished through a Sato–Micalizio reductive alkyne–alkyne coupling strategy and remote-amine controlled stannylcupration. However, the physical data for the synthetic and natural samples differ from each other, which suggests that the proposed structure should be reinvestigated.
Co-reporter:Takashi Moriya, Ayano Kawamata, Yusuke Takahashi, Yoshiharu Iwabuchi and Naoki Kanoh
Chemical Communications 2013 vol. 49(Issue 98) pp:11500-11502
Publication Date(Web):17 Oct 2013
DOI:10.1039/C3CC47264G
We have developed a fluorogenic NAD(P)+ detection method using 2-acetylbenzofuran. The reaction of NAD(P)+ with 2-acetylbenzofuran produced a fluorescent product, allowing the highly-sensitive and quick detection of NAD(P)+. This method was successfully applied to the detection of P450 substrates in the microtiter-plate format.
Co-reporter:Naoki Kanoh, Takahiro Suzuki, Makoto Kawatani, Yasuhiro Katou, Hiroyuki Osada, and Yoshiharu Iwabuchi
Bioconjugate Chemistry 2013 Volume 24(Issue 1) pp:44
Publication Date(Web):December 27, 2012
DOI:10.1021/bc3003666
Methyl gerfelin derivatives, each having an amine-terminated tri(ethylene glycol) linker at the peripheral position, were designed and systematically synthesized. These “TEGylated” derivatives were then subjected to a structure–activity relationship (SAR) study to examine their glyoxalase 1-inhibition activity and binding affinity toward the three binding proteins identified. Among the derivatives synthesized, that with a NH2-TEG linker at the C6-methyl group showed the most potent glyoxalase 1-inhibiting activity and glyoxalase 1 selectivity. These results indicated that derivatization at the C6-methyl group would be suitable for the further development of selective glyoxalase 1 inhibitors.
Co-reporter:Dr. Hayato Fukuda;Yuko Nishiyama;Shiina Nakamura;Yutaro Ohno;Dr. Tadashi Eguchi;Dr. Yoshiharu Iwabuchi;Dr. Takeo Usui;Dr. Naoki Kanoh
Chemistry – An Asian Journal 2012 Volume 7( Issue 12) pp:2872-2881
Publication Date(Web):
DOI:10.1002/asia.201200615
Abstract
We have developed two syntheses of vicenistatin and its analogues. Our first-generation strategy included the rapid and sequential assembly of the macrocyclic lactam by using an intermolecular Horner–Wadsworth–Emmons reaction between the C3–C13 fragment and the C1–C2, C14–C19 fragment, followed by an intramolecular Stille coupling reaction. The second-generation strategy utilized a ring-closing metathesis of a hexaene intermediate to generate the desired 20-membered macrolactam. This second-generation strategy made it possible to prepare synthetic analogues of vicenistatin, including the C20- and/or C23-demethyl analogues. Evaluation of the cytotoxic effect of these analogues indicated the importance of the fixed conformation of aglycon for determining the biological activity of the vicenistatins.
Co-reporter:Dr. Hiroshi Takayama;Dr. Shunji Takahashi;Takashi Moriya; Dr. Hiroyuki Osada; Dr. Yoshiharu Iwabuchi; Dr. Naoki Kanoh
ChemBioChem 2011 Volume 12( Issue 18) pp:2748-2752
Publication Date(Web):
DOI:10.1002/cbic.201100541
Co-reporter:Takashi Moriya, Ayano Kawamata, Yusuke Takahashi, Yoshiharu Iwabuchi and Naoki Kanoh
Chemical Communications 2013 - vol. 49(Issue 98) pp:NaN11502-11502
Publication Date(Web):2013/10/17
DOI:10.1039/C3CC47264G
We have developed a fluorogenic NAD(P)+ detection method using 2-acetylbenzofuran. The reaction of NAD(P)+ with 2-acetylbenzofuran produced a fluorescent product, allowing the highly-sensitive and quick detection of NAD(P)+. This method was successfully applied to the detection of P450 substrates in the microtiter-plate format.