Eelco Ruijter

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Organization: VU University Amsterdam , Belgium
Department: Department of Chemistry and Pharmaceutical Sciences
Title: (PhD)

TOPICS

Co-reporter:Răzvan C. Cioc, Peter Schuckman, Hans D. Preschel, Tjøstil Vlaar, Eelco Ruijter, and Romano V. A. Orru
Organic Letters 2016 Volume 18(Issue 15) pp:3562-3565
Publication Date(Web):July 12, 2016
DOI:10.1021/acs.orglett.6b01481
Cyanohydrins are versatile intermediates toward valuable organic compounds like α-hydroxy carboxylic acids, α-amino acids, and β-amino alcohols. Numerous protocols are available for synthesis of (O-protected) cyanohydrins, but all procedures invariably rely on the use of toxic cyanide sources. A novel cyanide-free synthesis of O-trityl protected cyanohydrins via a catalytic Passerini-type reaction involving aldehydes and trityl isocyanide is reported. The feasibility of a catalytic asymmetric reaction is demonstrated using chiral phosphoric acid catalysis.
Co-reporter:Pieter Mampuys, Yanping Zhu, Sergey Sergeyev, Eelco Ruijter, Romano V. A. Orru, Sabine Van Doorslaer, and Bert U. W. Maes
Organic Letters 2016 Volume 18(Issue 12) pp:2808-2811
Publication Date(Web):June 8, 2016
DOI:10.1021/acs.orglett.6b01023
A new method for the synthesis of secondary thiocarbamates from readily available isocyanides and thiosulfonates with broad functional group tolerance is reported. The reaction proceeds under mild reaction conditions in isopropanol and is catalyzed by inexpensive sodium iodide.
Co-reporter:Gydo van der Heijden, J. A. W. (Sjaak) Jong, Eelco Ruijter, and Romano V. A. Orru
Organic Letters 2016 Volume 18(Issue 5) pp:984-987
Publication Date(Web):February 5, 2016
DOI:10.1021/acs.orglett.6b00091
The development of 2-isocyanopyridines as novel convertible isocyanides for multicomponent chemistry is reported. Comparison of 12 representatives of this class revealed 2-bromo-6-isocyanopyridine as the optimal reagent in terms of stability and synthetic efficiency. It combines sufficient nucleophilicity with good leaving group capacity of the resulting amide moiety under both basic and acidic conditions. To demonstrate the practical utility of this reagent, an efficient two-step synthesis of the potent opioid carfentanil is presented.
Co-reporter:Corien deGraaff;Barry Oppelaar;Olivier Péruch;Christophe M. L. VeVelde;Beatrice Bechi;Nicholas J. Turner;Romano V. A. Orru
Advanced Synthesis & Catalysis 2016 Volume 358( Issue 10) pp:1555-1560
Publication Date(Web):
DOI:10.1002/adsc.201600038
Co-reporter:Sanne Bouwman, Romano V. A. Orru and Eelco Ruijter  
Organic & Biomolecular Chemistry 2015 vol. 13(Issue 5) pp:1317-1321
Publication Date(Web):02 Dec 2014
DOI:10.1039/C4OB02317J
We describe the conjugate addition of lithiated difluoromethanephosphonates to a diverse range of nitroglycals as a convenient method for the highly stereoselective synthesis of fluorinated aminoglycosyl phosphonates. Our approach provides opportunities to produce hydrolytically stable mimics of biologically important aminoglycosyl phosphates.
Co-reporter:Corien deGraaff;Lisa Bensch;Sjoerd J. Boersma;R&x103;zvan C. Cioc;Matthijs J. vanLint;Elwin Janssen;Dr. Nicholas J. Turner;Dr. Romano V. A. Orru;Dr. Eelco Ruijter
Angewandte Chemie 2015 Volume 127( Issue 47) pp:14339-14342
Publication Date(Web):
DOI:10.1002/ange.201507041

Abstract

The interrupted Fischer indole synthesis of arylhydrazines and biocatalytically generated chiral bicyclic imines selectively affords either tetracyclic pyrroloindolines or tricyclic tryptamine analogues depending on the reaction conditions. We demonstrate that the reaction is compatible with a variety of functional groups. The products are obtained in high optical purity and in reasonable to good yield. We present a plausible reaction mechanism to explain the observed reaction outcome depending on the stoichiometry of the acid mediator. To demonstrate the synthetic utility of our method, pharmaceutically relevant examples of both product classes were synthesized in highly efficient reaction sequences, including a phenserine analogue as a potential cholinesterase inhibitor and constrained tryptamine derivatives as selective inhibitors of the 5-HT6 serotonin receptor and the TRPV1 ion channel.

Co-reporter:Corien deGraaff;Lisa Bensch;Sjoerd J. Boersma;R&x103;zvan C. Cioc;Matthijs J. vanLint;Elwin Janssen;Dr. Nicholas J. Turner;Dr. Romano V. A. Orru;Dr. Eelco Ruijter
Angewandte Chemie International Edition 2015 Volume 54( Issue 47) pp:14133-14136
Publication Date(Web):
DOI:10.1002/anie.201507041

Abstract

The interrupted Fischer indole synthesis of arylhydrazines and biocatalytically generated chiral bicyclic imines selectively affords either tetracyclic pyrroloindolines or tricyclic tryptamine analogues depending on the reaction conditions. We demonstrate that the reaction is compatible with a variety of functional groups. The products are obtained in high optical purity and in reasonable to good yield. We present a plausible reaction mechanism to explain the observed reaction outcome depending on the stoichiometry of the acid mediator. To demonstrate the synthetic utility of our method, pharmaceutically relevant examples of both product classes were synthesized in highly efficient reaction sequences, including a phenserine analogue as a potential cholinesterase inhibitor and constrained tryptamine derivatives as selective inhibitors of the 5-HT6 serotonin receptor and the TRPV1 ion channel.

Co-reporter:Răzvan C. Cioc, Eelco Ruijter and Romano V. A. Orru  
Green Chemistry 2014 vol. 16(Issue 6) pp:2958-2975
Publication Date(Web):19 Feb 2014
DOI:10.1039/C4GC00013G
Sustainable or green chemistry has established firm ground providing essential design criteria for the development of efficient chemical syntheses of complex, high added value molecules. On the other hand, multicomponent reactions have only recently been recognized as major expansion of the synthetic chemist's toolbox. There is still little awareness, however, of the practical value of these type of reactions for meeting many of the criteria set by the green chemistry philosophy to guide organic chemists and process chemists in the design, synthesis and further development of truly sustainable manufacturing processes of medicines, food additives, catalysts or advanced materials. In this perspective we highlight the utility of multicomponent reactions as methods for green synthesis.
Co-reporter:Verónica Estévez, Gitte Van Baelen, Babette H. Lentferink, Tjøstil Vlaar, Elwin Janssen, Bert U. W. Maes, Romano V. A. Orru, and Eelco Ruijter
ACS Catalysis 2014 Volume 4(Issue 1) pp:40
Publication Date(Web):November 25, 2013
DOI:10.1021/cs400926z
A new synthetic approach to 4-aminopyrido[2,3-d]pyrimidines and 4-aminopyrido[3,2-d]pyrimidines based on palladium-catalyzed reaction of isocyanides with readily available N-(bromopyridyl)amidines is reported. The target heterocycles were obtained in generally good to excellent yield. For the two regioisomeric pyrimidopyrimidines, we compared our approach involving oxidative addition with the analogous C–H activation protocol because both methods have been reported for the synthesis of 4-aminoquinazolines. We found that the C–H activation protocol does not allow one to obtain the target pyridopyrimidines, but the imidoylative cross-coupling protocol provided a new entry to the synthesis of these medicinally important scaffolds.Keywords: cross-coupling; heterocycles; homogeneous catalysis; insertion reactions; isocyanides; palladium
Co-reporter:Tjøstil Vlaar;Lisa Bensch;Jasper Kraakman;Christophe M. L. VeVelde;Bert U. W. Maes;Romano V. A. Orru
Advanced Synthesis & Catalysis 2014 Volume 356( Issue 6) pp:1205-1209
Publication Date(Web):
DOI:10.1002/adsc.201301129
Co-reporter:Pieter Mampuys;Dr. Yanping Zhu;Dr. Tjøstil Vlaar;Dr. Eelco Ruijter;Dr. Romano V. A. Orru;Dr. Bert U. W. Maes
Angewandte Chemie International Edition 2014 Volume 53( Issue 47) pp:12849-12854
Publication Date(Web):
DOI:10.1002/anie.201406717

Abstract

Multiple applications of isothioureas as fine chemicals (or their precursors) are known, but a general sustainable method for their synthesis was hitherto unavailable. We report a novel general approach towards S-alkyl and S-aryl isothioureas through a copper(I)-catalyzed three-component reaction between amines, isocyanides, and thiosulfonates. The formal synthesis of a superpotent sweetener further illustrates the applicability of our method.

Co-reporter:Tjøstil Vlaar, Romano V. A. Orru, Bert U. W. Maes, and Eelco Ruijter
The Journal of Organic Chemistry 2013 Volume 78(Issue 20) pp:10469-10475
Publication Date(Web):September 24, 2013
DOI:10.1021/jo401924h
Isocyanides have emerged as valuable C1 building blocks in palladium catalysis. Their potential has, however, mainly been exploited for the synthesis of amidines and amidine-containing heterocycles. To illustrate the broader applicability of isocyanides, we have recently developed a novel oxidative coupling of diamines and isocyanides furnishing valuable guanidine-containing heterocycles. We here report the extension of this protocol to the coupling of anthranilic acids and isocyanides leading to medicinally relevant 2-aminobenzoxazinones. This is a particularly challenging substrate class for this reaction due to the possibility of undesired decarboxylative pathways and the susceptibility of the products to nucleophilic attack. Therefore, this work underlines the generality and broad potential of the oxidative coupling of bisnucleophiles and isocyanides, facilitating the further implementation of this chemistry in library design.
Co-reporter:Tjøstil Vlaar, Pieter Mampuys, Madeleine Helliwell, Bert U. W. Maes, Romano V. A. Orru, and Eelco Ruijter
The Journal of Organic Chemistry 2013 Volume 78(Issue 13) pp:6735-6745
Publication Date(Web):June 14, 2013
DOI:10.1021/jo401131p
4-Aminophthalazin-1(2H)-ones (APOs) are underexplored heterocyclic compounds with promising and diverse biological activities. The classical synthesis of these compounds is tedious and does not allow the regioselective introduction of substituents. Here, we present our full studies on the Pd-catalyzed cross-coupling of substituted o-(pseudo)halobenzoates and hydrazines with isocyanide insertion allowing straightforward access to diversely substituted APOs. We illustrate the advantages of this method compared to other approaches and describe solutions for the limitations we encountered. In addition, we have developed efficient diversifications of this heterocyclic scaffold that allow access to more diverse APOs as well as novel heterocyclic scaffolds.
Co-reporter:Tjøstil Vlaar;Dr. Eelco Ruijter;Dr. Bert U. W. Maes;Dr. Romano V. A. Orru
Angewandte Chemie International Edition 2013 Volume 52( Issue 28) pp:7084-7097
Publication Date(Web):
DOI:10.1002/anie.201300942

Abstract

Isocyanides have been important building blocks in organic synthesis since the discovery of the Ugi reaction and related isocyanide-based multicomponent reactions. In the past decade isocyanides have found a new application as versatile C1 building blocks in palladium catalysis. Palladium-catalyzed reactions involving isocyanide insertion offer a vast potential for the synthesis of nitrogen-containing fine chemicals. This Minireview discusses all the achievements in this emerging field.

Co-reporter:Tjøstil Vlaar;Dr. Eelco Ruijter;Dr. Bert U. W. Maes;Dr. Romano V. A. Orru
Angewandte Chemie 2013 Volume 125( Issue 28) pp:7222-7236
Publication Date(Web):
DOI:10.1002/ange.201300942

Abstract

Seit der Entdeckung der Ugi-Reaktion und ähnlicher Isocyanid- basierter Mehrkomponentenreaktionen sind Isocyanide wichtige Bausteine für die organische Synthese. In den letzten zehn Jahren fanden Isocyanide als vielseitige C1-Bausteine in der Palladiumkatalyse eine neue Anwendung. Palladiumkatalysierte Reaktionen, die unter Isocyanidinsertion ablaufen, bieten ein enormes Potenzial für die Synthese stickstoffhaltiger Feinchemikalien. In diesem Kurzaufsatz werden alle erzielten Erfolge auf diesem neu entstehenden Gebiet diskutiert.

Co-reporter:Corien de Graaff, Eelco Ruijter and Romano V. A. Orru  
Chemical Society Reviews 2012 vol. 41(Issue 10) pp:3969-4009
Publication Date(Web):02 Apr 2012
DOI:10.1039/C2CS15361K
Multicomponent reactions (MCRs) receive increasing attention because they address both diversity and complexity in organic synthesis. Thus, in principle diverse sets of relatively complex structures can be generated from simple starting materials in a single reaction step. The ever increasing need for optically pure compounds for pharmaceutical and agricultural applications as well as for catalysis promotes the development of asymmetric multicomponent reactions. In recent years, asymmetric multicomponent reactions have been applied to the total synthesis of various enantiopure natural products and commercial drugs, reducing the number of required reaction steps significantly. Although many developments in diastereoselective MCRs have been reported, the field of catalytic enantioselective MCRs has just started to blossom. This critical review describes developments in both diastereoselective and catalytic enantioselective multicomponent reactions since 2004. Significantly broadened scopes, new techniques, more environmentally benign methods and entirely novel MCRs reflect the increasingly inventive paths that synthetic chemist follow in this field. Until recently, enantioselective transition metal-catalyzed MCRs represented the majority of catalytic enantioselective MCRs. However, metal contamination is highly undesirable for drug synthesis. The emergence of organocatalysis greatly influences the quest for new asymmetric MCRs.
Co-reporter:Anass Znabet, Sara Blanken, Elwin Janssen, Frans J. J. de Kanter, Madeleine Helliwell, Nicholas J. Turner, Eelco Ruijter and Romano V. A. Orru  
Organic & Biomolecular Chemistry 2012 vol. 10(Issue 5) pp:941-944
Publication Date(Web):16 Nov 2011
DOI:10.1039/C1OB06699D
An efficient combination of MAO-N-catalyzed desymmetrization of cyclic meso-amines with Ugi-Smiles multicomponent chemistry produced optically pure N-aryl proline amides. This method represents the first report of a fully asymmetric Ugi-Smiles process.
Co-reporter:René den Heeten;Léon J. P. van der Boon;Daniël L. J. Broere;Elwin Janssen;Frans J. J. de Kanter, ;Romano V. A. Orru
European Journal of Organic Chemistry 2012 Volume 2012( Issue 2) pp:
Publication Date(Web):
DOI:10.1002/ejoc.201190110
Co-reporter:René den Heeten;Léon J. P. van der Boon;Daniël L. J. Broere;Elwin Janssen;Frans J. J. de Kanter, ;Romano V. A. Orru
European Journal of Organic Chemistry 2012 Volume 2012( Issue 2) pp:275-280
Publication Date(Web):
DOI:10.1002/ejoc.201101170

Abstract

The combination of the recently developed multicomponent construction of highly substituted 3,4-dihydropyridones with subsequent allylation and intramolecular Heck-type cyclization allows the straightforward construction of benzo[a]quinolizines, a class of polycyclic compounds that – despite their interesting pharmacological and photochemical properties – have little precedent in the literature. After optimization of the individual steps, we used this reliable three-step sequence to generate a small library of diversely substituted benzo[a]quinolizines and various heterocyclic analogs.

Co-reporter:Paul Slobbe, Eelco Ruijter and Romano V. A. Orru  
MedChemComm 2012 vol. 3(Issue 10) pp:1189-1218
Publication Date(Web):25 Jul 2012
DOI:10.1039/C2MD20089A
Multicomponent reactions are flexible reactions for the rapid generation of complex molecules with often biologically relevant scaffold structures. Combined with the ease of parallelization and the exploratory power with regard to chemical space, multicomponent reactions have attracted significant attention from the medicinal chemistry community. In this Review, we present an overview of recent literature concerning this topic to provide insight into the applications of multicomponent reactions in this field.
Co-reporter:Tjøstil Vlaar;Razvan C. Cioc;Pieter Mampuys;Dr. Bert U. W. Maes;Dr. Romano V. A. Orru;Dr. Eelco Ruijter
Angewandte Chemie International Edition 2012 Volume 51( Issue 52) pp:13058-13061
Publication Date(Web):
DOI:10.1002/anie.201207410
Co-reporter:Tjøstil Vlaar, Eelco Ruijter, Anass Znabet, Elwin Janssen, Frans J. J. de Kanter, Bert U. W. Maes, and Romano V. A. Orru
Organic Letters 2011 Volume 13(Issue 24) pp:6496-6499
Publication Date(Web):November 15, 2011
DOI:10.1021/ol202784d
Palladium-catalyzed cross-coupling of a wide range of substituted o-(pseudo)halobenzoates and hydrazines with isocyanide insertion followed by lactamization efficiently affords 4-aminophthalazin-1(2H)-ones that are difficult to obtain regioselectively by classical methods.
Co-reporter:Tjøstil Vlaar;Romano V. A. Orru
Advanced Synthesis & Catalysis 2011 Volume 353( Issue 6) pp:809-841
Publication Date(Web):
DOI:10.1002/adsc.201000979

Abstract

The importance of palladium-catalyzed cross coupling reactions in contemporary organic synthesis is undisputed and underlined by the Nobel Prize for Chemistry in 2010. In addition to the highly efficient cross coupling reactions for single CC bond construction, palladium-catalyzed cascade processes involving multiple bond formations have emerged in recent years as valuable tools for the rapid synthesis of complex molecular scaffolds. This review presents an overview of the most relevant developments in this field, with a focus on the generation of diverse poly- and heterocyclic scaffolds. The generally well understood reactivity of palladium has allowed the discovery of many intriguing novel cascade processes, and the creativity of the synthetic community will undoubtedly lead to many more discoveries in the future.

Co-reporter:Dr. Gitte VanBaelen;Ser Kuijer;Luká&x161; Rý&x10d;ek;Dr. Sergey Sergeyev;Elwin Janssen;Dr. Frans J. J. deKanter;Dr. Bert U. W. Maes;Dr. Eelco Ruijter;Dr. Romano V. A. Orru
Chemistry - A European Journal 2011 Volume 17( Issue 52) pp:15039-15044
Publication Date(Web):
DOI:10.1002/chem.201102468

Abstract

Compared with the widespread use of carbonylative Pd-catalyzed cross-coupling reactions, similar reactions involving isocyanide insertion are almost virgin territory. We investigated the intramolecular imidoylative cross-coupling of N-(2-bromoaryl)amidines, leading to 4-aminoquinazolines. After thorough optimization of the reaction with respect to palladium source and loading, ligand, base, temperature, and solvent, a small library of 4-aminoquinazolines was prepared to determine the scope of this method. Various substituents are tolerated on the amidine and the isocyanide, providing efficient access to a broad range of diversely substituted 4-aminoquinazolines of significant pharmaceutical interest.

Co-reporter:Eelco Ruijter, Romano V.A. Orru
Drug Discovery Today: Technologies (Spring 2013) Volume 10(Issue 1) pp:e15-e20
Publication Date(Web):1 March 2013
DOI:10.1016/j.ddtec.2012.10.012
Multicomponent reactions – reactions that combine three or more starting materials in one pot to give a single product that contains essentially all of the atoms of the reactants – offer many exciting opportunities for medicinal chemistry. Their most obvious application is in the drug discovery phase, where they can provide efficient access to large numbers of analogs for lead discovery or optimization. By contrast, the inherent ‘greenness’ of multicomponent reactions makes them of increasing importance in the sustainable production of pharmaceuticals. We will discuss recent advances in both fields as well as general drivers and barriers for the application of multicomponent reactions in a medicinal chemistry context.
Co-reporter:Corien de Graaff, Eelco Ruijter and Romano V. A. Orru
Chemical Society Reviews 2012 - vol. 41(Issue 10) pp:NaN4009-4009
Publication Date(Web):2012/04/02
DOI:10.1039/C2CS15361K
Multicomponent reactions (MCRs) receive increasing attention because they address both diversity and complexity in organic synthesis. Thus, in principle diverse sets of relatively complex structures can be generated from simple starting materials in a single reaction step. The ever increasing need for optically pure compounds for pharmaceutical and agricultural applications as well as for catalysis promotes the development of asymmetric multicomponent reactions. In recent years, asymmetric multicomponent reactions have been applied to the total synthesis of various enantiopure natural products and commercial drugs, reducing the number of required reaction steps significantly. Although many developments in diastereoselective MCRs have been reported, the field of catalytic enantioselective MCRs has just started to blossom. This critical review describes developments in both diastereoselective and catalytic enantioselective multicomponent reactions since 2004. Significantly broadened scopes, new techniques, more environmentally benign methods and entirely novel MCRs reflect the increasingly inventive paths that synthetic chemist follow in this field. Until recently, enantioselective transition metal-catalyzed MCRs represented the majority of catalytic enantioselective MCRs. However, metal contamination is highly undesirable for drug synthesis. The emergence of organocatalysis greatly influences the quest for new asymmetric MCRs.
Co-reporter:Anass Znabet, Sara Blanken, Elwin Janssen, Frans J. J. de Kanter, Madeleine Helliwell, Nicholas J. Turner, Eelco Ruijter and Romano V. A. Orru
Organic & Biomolecular Chemistry 2012 - vol. 10(Issue 5) pp:NaN944-944
Publication Date(Web):2011/11/16
DOI:10.1039/C1OB06699D
An efficient combination of MAO-N-catalyzed desymmetrization of cyclic meso-amines with Ugi-Smiles multicomponent chemistry produced optically pure N-aryl proline amides. This method represents the first report of a fully asymmetric Ugi-Smiles process.
Co-reporter:Sanne Bouwman, Romano V. A. Orru and Eelco Ruijter
Organic & Biomolecular Chemistry 2015 - vol. 13(Issue 5) pp:NaN1321-1321
Publication Date(Web):2014/12/02
DOI:10.1039/C4OB02317J
We describe the conjugate addition of lithiated difluoromethanephosphonates to a diverse range of nitroglycals as a convenient method for the highly stereoselective synthesis of fluorinated aminoglycosyl phosphonates. Our approach provides opportunities to produce hydrolytically stable mimics of biologically important aminoglycosyl phosphates.
Co-reporter:Jordy M. Saya, Barry Oppelaar, Răzvan C. Cioc, Gydo van der Heijden, Christophe M. L. Vande Velde, Romano V. A. Orru and Eelco Ruijter
Chemical Communications 2016 - vol. 52(Issue 84) pp:NaN12485-12485
Publication Date(Web):2016/09/26
DOI:10.1039/C6CC07459F
We report a highly diastereoselective interrupted Ugi reaction to construct a broad range of structurally congested and stereochemically complex spiroindolines from tryptamine-derived isocyanides. The reaction is facilitated by using fluorinated alcohols (TFE or HFIP) as solvents and tolerates a broad range of amines, aldehydes and 2-isocyanoethylindoles to give polycyclic products in moderate to excellent yields.
6-Oxa-9-azaspiro[4.5]decane
2-Propanol, 1-[(1,1-dimethylethyl)amino]-3-(phenylmethoxy)-
L-Ornithine, N2,N5-diformyl-, ethyl ester
Pyrido[2,3-d]pyrimidin-4-amine, N-(1,1-dimethylethyl)-2-(4-pyridinyl)-
1-Hexen-3-one, 1-[(4S)-2,2-dimethyl-1,3-dioxolan-4-yl]-5-methyl-, (1E)-
3-Nonen-5-one, 2,8-dimethyl-, (3E)-
1-Hepten-3-one, 1-(4-methoxyphenyl)-6-methyl-, (1E)-
3-Decynal
2H-1,3-Thiazine-2-thione, 3,6-dihydro-4,6-diphenyl-