Co-reporter:Xu-Min Gong, Gao-Wei Zheng, You-Yan Liu, and Jian-He Xu
Organic Process Research & Development September 15, 2017 Volume 21(Issue 9) pp:1349-1349
Publication Date(Web):July 5, 2017
DOI:10.1021/acs.oprd.7b00194
t-Butyl-6-cyano-(3R,5R)-dihydroxyhexanoate is an advanced chiral precursor for the synthesis of the side chain pharmacophore of cholesterol-lowering drug atorvastatin. Herein, a robust carbonyl reductase (LbCR) was newly identified from Lactobacillus brevis, which displays high activity and excellent diastereoselectivity toward bulky t-butyl 6-cyano-(5R)-hydroxy-3-oxo-hexanoate (7). The engineered Escherichia coli cells harboring LbCR and glucose dehydrogenase (for cofactor regeneration) were employed as biocatalysts for the asymmetric reduction of substrate 7. As a result, as much as 300 g L–1 of water-insoluble substrate was completely converted to the corresponding chiral diol with >99.5% de in a space–time yield of 351 g L–1 d–1, indicating a great potential of LbCR for practical synthesis of the very bulky and bi-chiral 3,5-dihydroxy carboxylate side chain of best-selling statin drugs.
Co-reporter:Yun-Peng Bai, Xiao-Jing Luo, Yu-Lian Zhao, Chun-Xiu Li, Dian-Sheng Xu, and Jian-He Xu
Journal of Agricultural and Food Chemistry October 18, 2017 Volume 65(Issue 41) pp:9094-9094
Publication Date(Web):September 26, 2017
DOI:10.1021/acs.jafc.7b03405
The biodegradation of pesticides by organophosphorus hydrolases (OPHs) requires an efficient enzyme production technology in industry. Herein, a Pichia pastoris strain was constructed for the extracellular expression of PoOPHM9, an engineered malathion-degrading enzyme. After optimization, the maximum titer and yield of fermentation reached 50.8 kU/L and 4.1 gprotein/L after 3 days, with the highest space-time yield (STY) reported so far, 640 U L–1 h–1. PoOPHM9 displayed its high activity and stability in the presence of 0.1% (w/w) plant-derived detergent. Only 0.04 mg/mL enzyme could completely remove 0.15 mM malathion in aqueous solution within 20 min. Furthermore, 12 μmol malathion on apples and cucumbers surfaces was completely removed by 0.05 mg/mL PoOPHM9 in tap water after 35 min washing. The efficient production of the highly active PoOPHM9 has cleared a major barrier to biodegradation of pesticide residues in food industry.Keywords: biodegradation; extracellular expression; malathion; organophosphorus hydrolase; Pichia pastoris;
Co-reporter:Hao Li, Ping Tian, Jian-He Xu, and Gao-Wei Zheng
Organic Letters June 16, 2017 Volume 19(Issue 12) pp:
Publication Date(Web):June 8, 2017
DOI:10.1021/acs.orglett.7b01274
A new imine reductase from Stackebrandtia nassauensis (SnIR) was identified, which displayed over 25- to 1400-fold greater catalytic efficiency for 1-methyl-3,4-dihydroisoquinoline (1-Me DHIQ) compared to other imine reductases reported. Subsequently, an efficient SnIR-catalyzed process was developed by simply optimizing the amount of cosolvent, and up to 15 g L–1 1-Me DHIQ was converted completely without a feeding strategy. Furthermore, the reaction proceeded well for a panel of dihydroisoquinolines, affording the corresponding tetrahydroisoquinolines (mostly in S-configuration) in good yields (up to 81%) and with moderate to excellent enantioselectivities (up to 99% ee).
Co-reporter:Ying Jiang;Yue-Peng Shang;Hao Li;Chao Zhang;Jiang Pan
Bioresources and Bioprocessing 2017 Volume 4( Issue 1) pp:
Publication Date(Web):
DOI:10.1186/s40643-017-0168-2
Co-reporter:Chao Zhang, Jiang Pan, Chun-Xiu Li, Yun-Peng Bai, Jian-He Xu
Catalysis Communications 2017 Volume 102(Volume 102) pp:
Publication Date(Web):1 December 2017
DOI:10.1016/j.catcom.2017.08.023
•A new carbonyl reductase, named SmCR, was successfully overexpressed in E. coli.•SmCR can asymmetrically reduce 4-oxo- and 5-oxodecanoic acids with high enantioselectivity.•(R)-γ-decalactone in 99% ee and (R)-δ-decalactone in 95% ee with 72–79% yields were obtained.A novel carbonyl reductase from Serratia marcescens, SmCR, was successfully cloned and overexpressed in Escherichia coli. SmCR could catalyze the asymmetric reduction of long-chain keto acids/esters containing remote carbonyl groups, such as 4-oxo- and 5-oxodecanoic acids, yielding chiral γ- and δ-decalactones with high enantiopurity (up to 99% ee). This is the first report of enzymatic synthesis of (R)-γ- and (R)-δ-decalactones starting from γ-, δ-keto acids using free enzymes.Download high-res image (106KB)Download full-size image
Co-reporter:Ke-Cai Chen;Ming-Min Zheng;Jiang Pan
Applied Biochemistry and Biotechnology 2017 Volume 183( Issue 2) pp:543-554
Publication Date(Web):01 August 2017
DOI:10.1007/s12010-017-2543-z
The lipase isolated from Serratia marcescens (LipA) is a useful biocatalyst for kinetic resolution of a pharmaceutically relevant epoxyester, (±)-3-(4′-methoxyphenyl) glycidic acid methyl ester [(±)-MPGM], to afford optically pure (−)-MPGM, a key intermediate for the synthesis of diltiazem hydrochloride. Two mutants, LipAL315S and LipAS271F, were identified from the combinatorial saturation mutation library of 14 amino acid residues lining the substrate-binding pocket. LipAL315S, LipAS271F, and their combination LipAL315S/S271F showed 2.6-, 2.2-, and 4.6-fold improvements in their specific activities towards para-nitrophenyl butyrate (pNPB), respectively. Among these positive mutants, LipAS271F displayed a 3.5-fold higher specific activity towards the pharmaco substrate (±)-MPGM. Kinetic study showed that the improvement in catalytic efficiency of LipAS271F against (±)-MPGM was mainly resulted from the enhanced affinity between substrate and enzyme, as indicated by the decrease of Km. Furthermore, to address the insoluble expression issue in Escherichia coli, the homologous expression of LipA gene in S. marcescens was achieved by introducing it into an expression vector pUC18, resulting in ca. 20-fold higher lipase production. The significantly improved volumeric production and specific activity of S. marcescens lipase make it very attractive as a new-generation biocatalyst for more efficient and economical manufacturing of (−)-MPGM.
Co-reporter:Ming-Min ZhengKe-Cai Chen, Ru-Feng Wang, Hao Li, Chun-Xiu Li, Jian-He Xu
Journal of Agricultural and Food Chemistry 2017 Volume 65(Issue 6) pp:
Publication Date(Web):January 24, 2017
DOI:10.1021/acs.jafc.6b05428
Ursodeoxycholic acid (UDCA) is the main active ingredient of natural bear bile powder with multiple pharmacological functions. 7β-Hydroxysteroid dehydrogenase (HSDH) is a key biocatalyst for the synthesis of UDCA. However, all the 7β-HSDHs reported commonly suffer from poor activity and thermostability, resulting in limited productivity of UDCA. In this study, a multiobjective directed evolution (MODE) strategy was proposed and applied to improve the activity, thermostability, and pH optimum of a 7β-HSDH. The best variant (V3–1) showed a specific activity 5.5-fold higher than and a half-life 3-fold longer than those of the wild type. In addition, the pH optimum of the variant was shifted to a weakly alkaline value. In the cascade reaction, the productivity of UDCA with V3–1 increased to 942 g L–1 day–1, in contrast to 141 g L–1 day–1 with the wild type. Therefore, this study provides a useful strategy for improving the catalytic efficiency of a key enzyme that significantly facilitated the bioproduction of UDCA.Keywords: 7β-hydroxysteroid dehydrogenase; biocatalysis; cascade reaction; multiobjective directed evolution; ursodeoxycholic acid;
Co-reporter:Jin-Gang Yin, Yi Gong, Xiao-Yan Zhang, Gao-Wei Zheng and Jian-He Xu
Catalysis Science & Technology 2016 vol. 6(Issue 16) pp:6305-6310
Publication Date(Web):27 May 2016
DOI:10.1039/C6CY00786D
A novel non-heme chloroperoxidase (SvGL) with promiscuous (−)-γ-lactamase activity towards Vince lactam was identified from Streptomyces viridochromogenes by genome data-mining. SvGL possesses high activity and excellent thermal stability and enantioselectivity. Furthermore, it is able to tolerate extremely high substrate concentrations (4.0 M, 436.5 g L−1). Using the newly discovered (−)-γ-lactamase as a biocatalyst, an efficient and environmentally benign process for the production of (+)-γ-lactam was developed. The process allowed an enantioselective resolution of 436.5 g L−1 racemic γ-lactam with only 0.2 g L−1 lyophilized cell-free extract, affording an extremely high substrate/catalyst ratio of 2183 (g g−1), a space-time yield of 458 g L−1 d−1, and a very low E factor (environmental factor) of 5.7 (kg waste per kg product) even when the process water is included.
Co-reporter:Yi Gong, Guo-Chao Xu, Qi Chen, Jin-Gang Yin, Chun-Xiu Li and Jian-He Xu
Catalysis Science & Technology 2016 vol. 6(Issue 7) pp:2370-2376
Publication Date(Web):09 Nov 2015
DOI:10.1039/C5CY01723H
Structure-based directed evolution has been successfully applied to BSEV4, a variant of Bacillus subtilis esterase, for enantioselective hydrolysis of DL-menthyl esters with elevated thermostability. BSEV4 displayed only 90% enantiomeric excess (ee) in preparing L-menthol from DL-menthyl benzoate, whereas the quadruple mutant BSEV7, produced by iterative saturation mutagenesis, showed >99% ee. Partial deconvolution of BSEV7 by generating the four respective single mutants indicated that each of them only improved the enantioselectivity slightly, implying pronounced synergy when the mutations act together. BSEV9 and BSEV11, produced by site-directed mutagenesis and random mutagenesis, respectively, showed 2.5- and 20-fold higher activities than BSEV7 while retaining high E-values. With merely 0.1 g L−1 of BSEV11 loading (cell-free extract), 130 g L−1 of DL-menthyl benzoate was asymmetrically hydrolyzed within 6 h, resulting in an enantiopurity of >99% ee and a space-time yield of 138 g L−1 d−1. This suggests that it is feasible to establish an efficient bioprocess by simultaneously addressing multiple issues of biocatalyst performance using the iterative multi-target evolution approach.
Co-reporter:Zheng-Jiao Luan, Hui-Lei Yu, Bao-Di Ma, Yi-Ke Qi, Qi Chen, and Jian-He Xu
Industrial & Engineering Chemistry Research 2016 Volume 55(Issue 47) pp:
Publication Date(Web):November 9, 2016
DOI:10.1021/acs.iecr.6b02440
Whole-protein random mutation and substrate tunnel evolution have recently been applied to the pharmaceutically relevant esterase RhEst1 for the synthesis of a cilastatin precursor. The mutant RhEst1M1 (=RhEst1A147I/V148F/G254A) was identified from a large library consisting of 1.5 × 104 variants. Though the activity of this mutant was improved 5-fold, the enantioselectivity for biohydrolysis decreased at the same time. Herein a smart library (3.0 × 103) focused on the cap domain of RhEst1 was constructed to improve its catalytic performance comprehensively. As a result, a variant designated as RhEst1M2 (=RhEst1M1-A143T), showed a 6-fold increase in specific activity compared with the wild type. Meanwhile, the decreased enantioselectivity for enzymatic resolution was recovered to the native enzyme level. The melting temperature of RhEst1M2 was nearly 11 °C higher than that of the wild type. This work provides detailed insight into the vital role of α/β hydrolase cap domains in influencing all aspects of enzyme characteristics. Furthermore, the commercial resin ESR-1 with free amino groups was used for enzyme immobilization to enhance the operational performance of RhEst1M2. No obvious activity loss was observed when the immobilized enzyme was incubated at 30 °C for 200 h. The immobilized enzyme could be repeatedly used for up to 20 batches, and the total turnover number (TTN) reached up to 8.0 × 105.
Co-reporter:Guo-Chao Xu, Yue-Peng Shang, Hui-Lei Yu and Jian-He Xu
Chemical Communications 2015 vol. 51(Issue 86) pp:15728-15731
Publication Date(Web):03 Sep 2015
DOI:10.1039/C5CC06796K
Key residues of Debaryomyces hansenii carbonyl reductase in the determination of the reducing activity towards aryl haloketones were identified through combinatorial mutation of conserved residues. This study provides a green and efficient biocatalyst for the synthesis of (S)-aryl halohydrins.
Co-reporter:Xue-Cheng Jiao, Jiang Pan, Guo-Chao Xu, Xu-Dong Kong, Qi Chen, Zhi-Jun Zhang and Jian-He Xu
Catalysis Science & Technology 2015 vol. 5(Issue 8) pp:4048-4054
Publication Date(Web):29 May 2015
DOI:10.1039/C5CY00537J
A novel 2-deoxyribose-5-phosphate aldolase (LbDERA) was identified from Lactobacillus brevis, with high activity, excellent thermostability and high tolerance against aldehyde substrates. The half-lives of LbDERA incubated in 300 mM acetaldehyde and chloroacetaldehyde were 37.3 and 198 min, respectively, which are 2- and 7-fold higher than those of EcDERA from Escherichia coli. The crystal structure of LbDERA determined at 1.95 Å resolution revealed a stable quaternary structure which might account for its excellent aldehyde tolerance. A single mutation, E78K, was introduced to LbDERA through a consensus sequence approach, resulting in significant improvements of both thermostability and aldehyde tolerance. According to the crystal structure of LbDERAE78K, two additional hydrogen bonds and one salt bridge were introduced compared with wild-type LbDERA. As a result of its high substrate tolerance, LbDERAE78K could efficiently catalyze a sequential aldol condensation with 0.7 M chloroacetaldehyde and 1.4 M acetaldehyde, affording a key chiral precursor of statins, (3R,5S)-6-chloro-2,4,6-trideoxyhexapyranoside, with an unprecedented space-time yield of 792.5 g L−1 d−1 and only 2.5 g L−1 of catalyst loading.
Co-reporter:Zheng-Jiao Luan, Fu-Long Li, Shuai Dou, Qi Chen, Xu-Dong Kong, Jiahai Zhou, Hui-Lei Yu and Jian-He Xu
Catalysis Science & Technology 2015 vol. 5(Issue 5) pp:2622-2629
Publication Date(Web):10 Feb 2015
DOI:10.1039/C5CY00085H
The esterase RhEst1 from Rhodococcus sp. ECU1013 has been reported for the enantioselective hydrolysis of ethyl (S)-(+)-2,2-dimethylcyclopropane carboxylate, producing the building block of cilastatin. In this work, error-prone PCR and site-directed saturation mutagenesis were applied to RhEst1 for activity improvement, with the pH-indicator assay as a high-throughput screening method. As a result, RhEst1A147I/V148F/G254A, with mutations surrounding the substrate access channel, showed a 5-fold increase in its specific activity compared with the native enzyme, as well as a 4-fold increase in protein solubility. Combined with the determination of protein structures and computational analysis, this work shows that the amino acids around the substrate channel play a more important role in the activity evolution of RhEst1 than those in the active site.
Co-reporter:Qi Chen, Zheng-Jiao Luan, Xiaolin Cheng, and Jian-He Xu
Biochemistry 2015 Volume 54(Issue 9) pp:1841-1848
Publication Date(Web):February 25, 2015
DOI:10.1021/bi5015612
A recombinant carboxylesterase, cloned from Pseudomonas putida and designated as rPPE, is capable of catalyzing the bioresolution of racemic 2-acetoxy-2-(2′-chlorophenyl)acetate (rac-AcO-CPA) with excellent (S)-enantioselectivity. Semirational design of the enzyme showed that the W187H variant could increase the activity by ∼100-fold compared to the wild type (WT) enzyme. In this study, we performed all-atom molecular dynamics (MD) simulations of both apo-rPPE and rPPE in complex with (S)-AcO-CPA to gain insights into the origin of the increased catalysis in the W187H mutant. Our results show differential binding of (S)-AcO-CPA in the WT and W187H enzymes, especially the interactions of the substrate with the two active site residues Ser159 and His286. The replacement of Trp187 by His leads to considerable structural rearrangement in the active site of W187H. Unlike in the WT rPPE, the cap domain in the W187 mutant shows an open conformation in the simulations of both apo and substrate-bound enzymes. This open conformation exposes the catalytic triad to the solvent through a water accessible channel, which may facilitate the entry of the substrate and/or the exit of the product. Binding free energy calculations confirmed that the substrate binds more strongly in W187H than in WT. On the basis of these computational results, we further predicted that the mutations W187Y and D287G might also be able to increase the substrate binding and thus improve the enzyme’s catalytic efficiency. Experimental binding and kinetic assays on W187Y and D287G show improved catalytic efficiency over WT, but not W187H. Contrary to our prediction, W187Y shows slightly decreased substrate binding coupled with a 100-fold increase in turnover rate, while in D287G the substrate binding is 8 times stronger but with a slightly reduced turnover rate. Our work provides important molecular-level insights into the binding of the (S)-AcO-CPA substrate to carboxylesterase rPPEs, which will help guide future development of more efficient rPPE variants.
Co-reporter:Guo-Chao Xu, Hui-Lei Yu, Yue-Peng Shang and Jian-He Xu
RSC Advances 2015 vol. 5(Issue 29) pp:22703-22711
Publication Date(Web):09 Feb 2015
DOI:10.1039/C4RA16779A
Two robust stereocomplementary carbonyl reductases (DhCR and CgCR) were identified through rescreening the carbonyl reductase toolbox. Five reductases were returned through the activity and enantioselectivity assay for α-chloro-1-acetophenone and ethyl 4-chloro-3-oxo-butanate (COBE). Three reductases were stable at elevated substrate loading. Enzymatic characterization revealed that DhCR and CgCR were more thermostable. As much as 330 g COBE in 1 L biphasic reaction mixture was reduced to (S)- and (R)-3-hydroxy-4-chlorobutyrate by DhCR and CgCR (coexpressed with glucose dehydrogenase), with 92.5% and 93.0% yields, >99% ee, and total turnover numbers of 53800 and 108000, respectively. Six other α-halohydrins were asymmetrically reduced to optically pure forms at a substrate loading of 100 g L−1. Our results indicate the potential of these two stereocomplementary reductases in the synthesis of valuable α-halohydrins for pharmaceuticals.
Co-reporter:Qi Chen, Zheng-Jiao Luan, Hui-Lei Yu, Xiaolin Cheng, Jian-He Xu
Journal of Molecular Graphics and Modelling 2015 Volume 62() pp:319-324
Publication Date(Web):November 2015
DOI:10.1016/j.jmgm.2015.10.015
•MD simulations provide a molecular-level explanation for the increased activity.•Six mutants were rational designed according to MD simulations and SVM based method.•Two predicted mutants show higher catalytic efficiency and confirmed by experiment.A new carboxylic esterase RhEst1 which catalyzes the hydrolysis of (S)-(+)-2,2-dimethylcyclopropanecarboxylate (S-DmCpCe), the key chiral building block of cilastatin, was identified and subsequently crystallized in our previous work. Mutant RhEst1A147I/V148F/G254A was found to show a 5-fold increase in the catalytic activity. In this work, molecular dynamic simulations were performed to elucidate the molecular determinant of the enzyme activity. Our simulations show that the substrate binds much more strongly in the A147I/V148F/G254A mutant than in wild type, with more hydrogen bonds formed between the substrate and the catalytic triad and the oxyanion hole. The OH group of the catalytic residue Ser101 in the mutant is better positioned to initiate the nucleophilic attack on S-DmCpCe. Interestingly, the “170–179” loop which is involved in shaping the catalytic sites and facilitating the product release shows remarkable dynamic differences in the two systems. Based on the simulation results, six residues were identified as potential “hot-spots” for further experimental testing. Consequently, the G126S and R133L mutants show higher catalytic efficiency as compared with the wild type. This work provides molecular-level insights into the substrate binding mechanism of carboxylic esterase RhEst1, facilitating future experimental efforts toward developing more efficient RhEst1 variants for industrial applications.
Co-reporter:Jia-Yan Liu;Han-Ping Bian;Yun Tang
Applied Microbiology and Biotechnology 2015 Volume 99( Issue 4) pp:1701-1708
Publication Date(Web):2015 February
DOI:10.1007/s00253-014-5992-0
Bacillus amyloliquefaciens esterase (BAE) was applied to produce (R)-1-(3′,4′-methylenedioxyphenyl)ethanol, a chiral drug intermediate. In this study, we improved the enantioselectivity of BAE by protein engineering instead of process engineering as used in our previous work. Saturation mutagenesis was carried out on eight positions of BAE based on structure modeling and substrate docking. A double substituted variant V10 (K358D/A396C) showed an excellent enantioselectivity without decreasing the activity. The functions of these two mutations (K358D and A396C) were investigated, revealing a synergic effect on the BAE enantioselectivity. Using the variant V10, enantiopure (R)-1-(3′,4′-methylenedioxyphenyl)ethanol could be readily prepared in >97 % ee, affording a high space-time yield (123 g L−1 day−1) and a high ratio of substrate/catalyst (40 g g−1) in 1-L reaction.
Co-reporter:Ru-Feng Wang;Ming-Min Zheng;Yue-De Cao;Hao Li
Applied Microbiology and Biotechnology 2015 Volume 99( Issue 8) pp:3433-3442
Publication Date(Web):2015 April
DOI:10.1007/s00253-015-6446-z
An eco-friendly and convenient preparation method for notoginsenoside ST-4 has been established by completely transforming vina-ginsenoside R7 using a recombinant glycosidase hydrolyzing enzyme (HaGH03) from Herpetosiphon aurantiacus. This enzyme specifically hydrolyzed the glucose at the C-20 position but not the external xylose or two inner glucoses at position C-3. Protein sequence BLAST revealed that HaGH03, composed of 749 amino acids and presumptively listed as a member of the family 3 glycoside hydrolases, has highest identity (48 %) identity with a thermostable β-glucosidase B, which was not known of any functions for ginsenoside transformation. The steady state kinetic parameters for purified HaGH03 measured against p-nitrophenyl β-D-glucopyranoside and vina-ginsenoside R7 were KM = 5.67 ± 0.24 μM and 0.59 ± 0.23 mM, and kcat = 69.2 ± 0.31/s and 2.15 ± 0.46/min, respectively. HaGH03 converted 2.5 mg/mL of vina-ginsenoside R7 to ST-4 with a molar yield of 100 % and a space-time yield of 104 mg/L/h in optimized conditions. These results underscore that HaGH03 has much potential for the effective preparation of target ginsenosides possessing valuable pharmacological activities. This is the first report identifying an enzyme that has the ability to transform vina-ginsenoside R7 and provides an approach to preparing rare notoginsenoside ST-4.
Co-reporter:Jin-Gang Yin;Guo-Chao Xu;Gao-Wei Zheng
Applied Biochemistry and Biotechnology 2015 Volume 176( Issue 4) pp:1102-1113
Publication Date(Web):2015 June
DOI:10.1007/s12010-015-1632-0
A new esterase gene abmbh, encoding a benzoate hydrolase which can enantioselectively hydrolyze l-menthyl benzoate to l-menthol, was recently identified from the genomic library of a soil isolate Acinetobacter sp. ECU2040. The abmbh gene contains a 1080-bp open reading frame encoding a protein of 360 amino acids with a calculated molecular mass of 40.7 kDa. The corresponding enzyme AbMBH was functionally expressed in Escherichia coli BL21 (DE3), purified, and characterized. The AbMBH displayed the maximum activity towards p-nitrophenyl butyrate at 50 °C, and an optimum pH of 8.5. A KM of 2.6 mM and a kcat of 0.26 s−1 were observed towards dl-menthyl benzoate. The AbMBH exhibited a moderate enantioselectivity (E = 27.5) towards dl-menthyl benzoate. It can also catalyze the enantioselective hydrolysis of a variety of racemic menthyl esters, including dl-menthyl acetate, dl-menthyl chloroacetate, and dl-menthyl butyrate.
Co-reporter:Bao-Di Ma, Xu-Dong Kong, Hui-Lei Yu, Zhi-Jun Zhang, Shuai Dou, Yan-Peng Xu, Yan Ni, and Jian-He Xu
ACS Catalysis 2014 Volume 4(Issue 3) pp:1026
Publication Date(Web):February 17, 2014
DOI:10.1021/cs401183e
Optically pure α-hydroxy acids and their derivatives are versatile chiral building blocks in the pharmaceutical industry. In this study, the potential of a recombinant Pseudomonas putida esterase (rPPE01) for the enzymatic resolution of α-acetoxy acids was significantly improved by combinatorial engineering of both the biocatalyst and substrate. Semirational design based on homologous modeling and molecular docking provided a single-point variant, W187H, whose kcat/KM for sodium 2-acetoxy-2-(2′-chlorophenyl)acetate (Ac-CPA-Na) was increased 100-fold, from 0.0611 to 6.20 mM–1 s–1, while retaining its excellent enantioselectivity and broad substrate spectrum. Biocatalyst deactivation under the operating conditions was decreased by using the potassium salt of Ac-CPA instead of Ac-CPA-Na. With 0.5 g L–1 of lyophilized cells containing rPPE01-W187H, 500 mM (R,S)-Ac-CPA-K was selectively deacylated with 49.9% conversion within 15 h, giving satisfactory enantiomeric excesses (ee) for both the S product (>99% ee) and the remaining R substrate (98.7% ee). Consequently, the amount of (S)-2-hydroxy-2-(2′-chlorophenyl)acetate prepared per unit weight of lyophilized cells was improved by a factor of 18.9 compared with the original productivity of the wild-type esterase. Further enzymatic resolution of other important hydroxy acids at the 100 mL scale demonstrated that the rPPE01-W187H-based bioprocess is versatile and practical for the large-scale preparation of chiral α-hydroxy acids.Keywords: catalyst productivity; deacylation; enzymatic resolution; product:catalyst ratio; semirational design; α-hydroxy acid
Co-reporter:Hieu-Huy Nguyen-Tran, Gao-Wei Zheng, Xu-Hong Qian and Jian-He Xu
Chemical Communications 2014 vol. 50(Issue 22) pp:2861-2864
Publication Date(Web):27 Jan 2014
DOI:10.1039/C3CC48590K
A new bacterial nitroreductase has been identified and used as a biocatalyst for the controllable reduction of a variety of nitroarenes with an electron-withdrawing group to the corresponding N-arylhydroxylamines under mild reaction conditions with excellent selectivity (>99%). This method therefore represents a green and efficient method for the synthesis of arylhydroxylamines.
Co-reporter:Lei Huang;Hong-Min Ma;Hui-Lei Yu
Advanced Synthesis & Catalysis 2014 Volume 356( Issue 9) pp:1943-1948
Publication Date(Web):
DOI:10.1002/adsc.201300775
Co-reporter:Jiang Pan, Gao-Wei Zheng, Qin Ye, and Jian-He Xu
Organic Process Research & Development 2014 Volume 18(Issue 6) pp:739-743
Publication Date(Web):June 3, 2014
DOI:10.1021/op500088w
Ethyl 4-chloro-3-oxobutanoate (COBE) was asymmetrically reduced with Escherichia coli cells expressing a reductase (ScCR) from Streptomyces coelicolor to afford enantiopure ethyl (S)-4-chloro-3-hydroxybutanoate [(S)-CHBE], which is an important precursor for preparing the drug atorvastatin. The substrate load was fixed at 100 g/L, and the concentration of coenzyme NAD+ was limited to 0.1 mM based on cost considerations. Under these conditions, the other reaction parameters were optimized as 25 °C and pH 6.5, with a biocatalyst dose of 10 kU/L in the presence of isopropanol (1.5 equiv of COBE), which acted as a cosubstrate for regenerating NADH. The reaction was performed in a toluene–aqueous biphasic system (1:1, v/v), with agitation at the maximal linear rate of 0.88 m/s. Finally, the bioreaction was performed on a pilot scale using a 50 L thermostated stirred-tank-reactor, affording (S)-CHBE in 85.4% yield and 99.9% ee, and a total turnover number (TTN) of 6060 for the cofactor NAD+. The specific production was calculated to be 36.8 gproduct/gdcw, which is the highest value reported to date among the whole-cell-mediated processes for producing (S)-CHBE.
Co-reporter:Xu-Dong Kong;Qian Ma;Jiahai Zhou;Bu-Bing Zeng
Angewandte Chemie International Edition 2014 Volume 53( Issue 26) pp:6641-6644
Publication Date(Web):
DOI:10.1002/anie.201402653
Abstract
Microtuning of the enzyme active pocket has led to a smart library of epoxide hydrolase variants with an expanded substrate spectrum covering a series of typical β-blocker precursors. Improved activities of 6- to 430-fold were achieved by redesigning the active site at two predicted hot spots. This study represents a breakthrough in protein engineering of epoxide hydrolases and resulted in enhanced activity toward bulky substrates.
Co-reporter:Lin Li;Xu-Dong Kong;She Chen;Shuguang Yuan;Jiahai Zhou
PNAS 2014 Volume 111 (Issue 44 ) pp:15717-15722
Publication Date(Web):2014-11-04
DOI:10.1073/pnas.1404915111
Optically pure epoxides are essential chiral precursors for the production of (S)-propranolol, (S)-alprenolol, and other β-adrenergic receptor blocking drugs. Although the enzymatic production of these bulky epoxides has
proven difficult, here we report a method to effectively improve the activity of BmEH, an epoxide hydrolase from Bacillus megaterium ECU1001 toward α-naphthyl glycidyl ether, the precursor of (S)-propranolol, by eliminating the steric hindrance near the potential product-release site. Using X-ray crystallography, mass
spectrum, and molecular dynamics calculations, we have identified an active tunnel for substrate access and product release
of this enzyme. The crystal structures revealed that there is an independent product-release site in BmEH that was not included in other reported epoxide hydrolase structures. By alanine scanning, two mutants, F128A and M145A,
targeted to expand the potential product-release site displayed 42 and 25 times higher activities toward α-naphthyl glycidyl
ether than the wild-type enzyme, respectively. These results show great promise for structure-based rational design in improving
the catalytic efficiency of industrial enzymes for bulky substrates.
Co-reporter:Rui-Jie Chen, Gao-Wei Zheng, Yan Ni, Bu-Bing Zeng, Jian-He Xu
Tetrahedron: Asymmetry 2014 Volume 25(Issue 23) pp:1501-1504
Publication Date(Web):15 December 2014
DOI:10.1016/j.tetasy.2014.10.011
A new NADH-dependent carbonyl reductase RhCR capable of efficiently reducing the ε-ketoester ethyl 8-chloro-6-oxooctanoate (ECOO) to give ethyl (S)-8-chloro-6-hydroxyoctanoate [(S)-ECHO], an important chiral precursor for the synthesis of (R)-α-lipoic acid, was identified from Rhodococcus sp. ECU1014. Using recombinant Escherichia coli cells expressing RhCR and glucose dehydrogenase used for the regeneration of cofactor, 440 g L−1 (2 M) of ECOO were stoichiometrically converted to (S)-ECHO in a space–time yield of 1580 g L−1 d−1 without the external addition of any expensive cofactor.Ethyl (S)-8-chloro-6-hydroxyoctanoateC10H19ClO3[α]D22 = +19.8 (c 1.0, CHCl3)Source of chirality: enzymatic reductionAbsolute configuration: (S)
Co-reporter:Su-Xia Li;Qiang Ma;Kang Lin;Jiao-Jiao Wu
Applied Biochemistry and Biotechnology 2014 Volume 172( Issue 6) pp:2945-2954
Publication Date(Web):2014 March
DOI:10.1007/s12010-013-0690-4
A novel lipase lipB from Serratia marcescens ECU1010 is highly stable in the presence of organic solvents. By sequence and structure comparison with homologous lipase lipA, three amino acid residues were found to be different between them. To identify the residues which increase the organic solvent stability of lipB, residues that potentially provide this stability were mutated to the ones of lipA at equivalent positions. The replacement of Gly at position 33 by Asp obviously decreased its stability in organic solvents. Molecular modeling and structural analysis also suggested that the Gly33 residue is important for the organic solvent stability of lipB.
Co-reporter:Jia-Yan Liu;Gao-Wei Zheng;Tadayuki Imanaka
Biotechnology and Bioprocess Engineering 2014 Volume 19( Issue 3) pp:442-448
Publication Date(Web):2014 June
DOI:10.1007/s12257-013-0559-y
Optically pure 1-(3’,4’-methylenedioxyphenyl) ethanol is a key chiral intermediate for the synthesis of Steganacin and Salmeterol. A para-nitrobenzyl esterase cloned from Bacillus amyloliquefaciens (BAE) was employed to hydrolyze 1-(3’,4’-methylenedioxyphenyl) ethyl ester for the production of (R)-1-(3’,4’-methylenedioxyphenyl)ethanol. Initially, a moderate enantioselectivity (E = 35) only was obtained at 30°C. Some reaction conditions such as reaction temperature and additive approach were investigated in order to improve the enantioselectivity of the BAEcatalyzed reaction.. As a result, the enantioselectivity was improved significantly to 140 under addition of Tween-80 and a decreasing reaction temperature to 0°C. The result was confirmed in a decagram-scale preparative bioresolution also. The optimized enzymatic hydrolysis conditions provide a more effective process for the (R)-1-(3’,4’-methylenedioxyphenyl) ethanol bioproduction.
Co-reporter:Yu-Cai He;Zhen-Xing Yang;Dan-Ping Zhang
Applied Biochemistry and Biotechnology 2014 Volume 173( Issue 8) pp:2042-2053
Publication Date(Web):2014 August
DOI:10.1007/s12010-014-1001-4
The reductase (PgCR) from recombinant Escherichia coli CCZU-Y10 displayed high reductase activity and excellent stereoselectivity for the reduction of ethyl 4-chloro-3-oxobutanoate (COBE) into ethyl (S)-4-chloro-3-hydroxybutanoate ((S)-CHBE). To efficiently synthesize (S)-CHBE (>99 % enantiomeric excess (ee)), the highly stereoselective bioreduction of COBE into (S)-CHBE with the whole cells of E. coli CCZU-Y10 was successfully demonstrated in a dibutyl phthalate-water biphasic system. The appropriate ratio of the organic phase to water phase was 1:1 (v/v). The optimum reaction temperature, reaction pH, cosubstrate, NAD+, and cell dosage of the biotransformation of 100 mM COBE in this biphasic system were 30 °C, 7.0, mannitol (2.5 mmol/mmol COBE), 0.1 μmol/(mmol COBE), and 0.1 g (wet weight)/mL, respectively. Moreover, COBE at a high concentration of (1,000 mM) could be asymmetrically reduced to (S)-CHBE in a high yield (99.0 %) and high enantiometric excess value (>99 % ee). Significantly, E. coli CCZU-Y10 shows high potential in the industrial production of (S)-CHBE (>99 % ee).
Co-reporter:Ke Hu;Chun-Xiu Li;Jiang Pan;Yan Ni
Applied Biochemistry and Biotechnology 2014 Volume 172( Issue 3) pp:1215-1226
Publication Date(Web):2014 February
DOI:10.1007/s12010-013-0484-8
A new thermostable β-1,4-mannanase (DtManB) cloned from Dictyoglomus thermophilum CGMCC 7283 showed the maximum activity towards hydroxypropyl guar gum at 80 °C, with a half-life of 46 h. DtManB exhibited good compatibility with various additives of fracturing fluid, retaining more than 50 % activity in all the cases tested. More importantly, premature degradation could be alleviated significantly when using DtManB as breaker, because at 27 and 50 °C it displayed merely 3.7 and 18.5 % activities compared to those at 80 °C. In a static test, 0.48 mg DtManB could break 200 mL borax cross-linked fracturing fluid dramatically at 80 °C, and merely 18 mPa s of the viscosity was detected even after the broken fluid was cooled down and only 161.4 mg L−1 of the residue was left after the enzymatic reaction. All these positive features demonstrate the great potential of this mannanase as a new enzyme breaker for application in enhanced recovery of petroleum oil.
Co-reporter:Qing-Qing Zhu;Wan-Hong He;Xu-Dong Kong
Applied Microbiology and Biotechnology 2014 Volume 98( Issue 1) pp:207-218
Publication Date(Web):2014 January
DOI:10.1007/s00253-013-4845-6
Two native epoxide hydrolases (EHs) were previously discovered from mung bean powder (Vigna radiata), both of which can catalyze the enantioconvergent hydrolysis of p-nitrostyrene oxide (pNSO). In this study, the encoding gene of VrEH1 was successfully cloned from the cDNA of V. radiata by RT-PCR and rapid amplification of cDNA ends (RACE) technologies. High homologies were found to two putative EHs originated from Glycine max (80 %) and Medicago truncatula (79 %). The vreh1 gene constructed in pET28a(+) vector was then heterologously overexpressed in Escherichia coli BL21(DE3), and the encoded protein was purified to homogeneity by nickel affinity chromatography. It was shown that VrEH1 has an optimum activity at 45 °C and is very thermostable with an inactivation energy of 468 kJ mol-1. The enzyme has no apparent requirement of metal ions for activity, and its activity was strongly inhibited by 1 mM of Ni2+, Cu2+, Fe2+, or Co2+. By adding 0.1 % Triton X-100, the enzyme activity could be significantly increased up to 340 %. VrEH1 shows an unusual ability of enantioconvergent catalysis for the hydrolysis of racemic pNSO, affording (R)-p-nitrophenyl glycol (pNPG). It displays opposite regioselectivity toward (S)-pNSO (83 % to Cα) in contrast to (R)-pNSO (87 % to Cβ). The KM and kcat of VrEH1 were determined to be 1.4 mM and 0.42 s-1 for (R)-pNSO and 5.5 mM and 6.2 s-1 for (S)-pNSO. This thermostable recombinant VrEH1 with enantioconvergency is considered to be a promising biocatalyst for the highly productive preparation of enantiopure vicinal diols and also a good model for understanding the mechanism of EH stereoselectivity.
Co-reporter:Zhi-Jun Zhang;Jiang Pan;Chun-Xiu Li;Hui-Lei Yu
Bioprocess and Biosystems Engineering 2014 Volume 37( Issue 7) pp:1241-1248
Publication Date(Web):2014 July
DOI:10.1007/s00449-013-1096-y
Recombinant Escherichia coli cells expressing Alcaligenes sp. nitrilase were simply immobilized by direct cross-linking using glutaraldehyde. About 85 % of the total nitrilase activity was recovered under the optimal cross-linking conditions. The thermal stabilities of the cross-linked cells measured at 30, 40 and 50 °C were 4.5-, 5.3-, and 5.1-fold those of the free cells, respectively. The concentration of (R)-(−)-mandelic acid reached 280 mM after merely 2 h transformation with the immobilized cells using 300 mM mandelonitrile as substrate, affording an extremely high productivity of 510.7 g L−1 d−1. In addition, operational stability of the immobilized cells was obviously superior to that of free cells, without significant activity loss after 15 cycles of batch reactions or 8 cycles of repeated fed-batch reactions. Therefore, the easy preparation and robust characteristics of the immobilized biocatalyst make it a very promising biocatalyst for high-performance and low-cost production of optically pure (R)-(−)-mandelic acid.
Co-reporter:Guo-Chao Xu, Hui-Lei Yu, Zhi-Jun Zhang, and Jian-He Xu
Organic Letters 2013 Volume 15(Issue 21) pp:5408-5411
Publication Date(Web):October 21, 2013
DOI:10.1021/ol402733y
α-Ethylation is competing with the biocatalytic reduction of aromatic β-ketonitriles in a whole-cell system. Use of two newly mined robust and stereocomplementary carbonyl reductases in a biphasic system has completely eliminated the competing byproduct. For the first time, both enantiomers of fluoroxetine precursors were obtained at 0.5 M with >99% ee and excellent chemoselectivity, without addition of any external cofactors.
Co-reporter:Wen-Xia Zhang, Guo-Chao Xu, Lei Huang, Jiang Pan, Hui-Lei Yu, and Jian-He Xu
Organic Letters 2013 Volume 15(Issue 19) pp:4917-4919
Publication Date(Web):September 19, 2013
DOI:10.1021/ol402269k
A new keto reductase (ArQR), identified from Agrobacterium radiobacter ECU2556, can efficiently reduce 3-quinuclidinone in excellent enantioselectivity and high space–time yield for the synthesis of (R)-3-quinuclidinol, a chiral building block of many antimuscarinic agents. This is the first time that a high yield of (R)-3-quinuclidinol up to 916 g L–1 d–1 using a bioreduction approach is reported.
Co-reporter:Guochao Xu;Huilei Yu;Jianhe Xu
Chinese Journal of Chemistry 2013 Volume 31( Issue 3) pp:349-354
Publication Date(Web):
DOI:10.1002/cjoc.201201119
Abstract
Chiral secondary alcohols with additional functional groups are frequently required as important and valuable synthons for pharmaceuticals, agricultural and other fine chemicals. With the advantages of environmentally benign reaction conditions, broad reaction scope, and high stereoselectivity, biocatalytic reduction of prochiral ketones offers significant potential in the synthesis of optically active alcohols. A CmCR homologous carbonyl reductase from Pichia guilliermondii NRRL Y-324 was successfully overexpressed. Substrate profile characterization revealed its broad substrate specificity, covering aryl ketones, aliphatic ketones and ketoesters. Furthermore, a variety of ketone substrates were asymmetrically reduced by the purified enzyme with an additionally NADPH regeneration system. The reduction system exhibited excellent enantioselectivity (>99% ee) in the reduction of all the aromatic ketones and ketoesters, except for 2-bromoacetophenone (93.5% ee). Semi-preparative reduction of six ketones was achieved with high enantioselectivity (>99% ee) and isolation yields (>80%) within 12 h. This study provides a useful guidance for further application of this enzyme in the asymmetric synthesis of chiral alcohol enantiomers.
Co-reporter:Dong-Jie Zhou;Jiang Pan;Hui-Lei Yu
Applied Microbiology and Biotechnology 2013 Volume 97( Issue 14) pp:6293-6300
Publication Date(Web):2013 July
DOI:10.1007/s00253-012-4435-z
A new strain, Enterobacter sp. ECU1107, was identified among over 200 soil isolates using a two-step screening strategy for the enantioselective synthesis of (2S,3R)-3-phenylglycidate methyl ester (PGM), a key intermediate for production of a potent anticancer drug Taxol®. An organic–aqueous biphasic system was employed to reduce spontaneous hydrolysis of the substrate PGM and isooctane was found to be the most suitable organic solvent. The temperature and pH optima of the whole cell-mediated bioreaction were 40 °C and 6.0, respectively. Under these reaction conditions, the enantiomeric excess (ees) of (2S,3R)-PGM recovered was greater than 99 % at approximately 50 % conversion. The total substrate loading in batch reaction could reach 600 mM. By using whole cells of Enterobacter sp. ECU1107, (2S,3R)-PGM was successfully prepared in decagram scale in a 1.0-l mechanically stirred reactor, affording the chiral epoxy ester in >99 % ees and 43.5 % molar yield based on the initial load of racemic substrate.
Co-reporter:Chao-Hong Liu;Jiang Pan;Qin Ye
Applied Microbiology and Biotechnology 2013 Volume 97( Issue 17) pp:7659-7667
Publication Date(Web):2013 September
DOI:10.1007/s00253-013-5038-z
(S)-(+)-2,2-Dimethylcyclopropane carboxylic acid [(S)-(+)-DMCPA] is a key chiral intermediate for production of Cilastatin, an excellent renal dehydropeptidase-I inhibitor. In this study, a new method for preparation of (S)-(+)-DMCPA with microbial esterases was investigated. A microbial screening program obtained six esterase-producing isolates that could display relatively high activities and enantioselectivities using racemic ethyl 2,2-dimethylcyclopropane carboxylate (DMCPE) as screening substrate, aiming at forming optically pure (S)-(+)-DMCPA. Further selection was carried out with substrates having different alcohol moieties, including methyl, ethyl, and 2-chloroethyl esters. Finally, one of these strains, numbered ECU1013, with high enantioselectivity toward the hydrolytic resolution of methyl 2,2-dimethylcyclopropane carboxylate (DMCPM), afforded the (S)-product in 92 % ee, and was later identified as Rhodococcus sp. According to our research, there were several active esterases to DMCPM in cells of Rhodococcus sp. ECU1013; however, (S)-preferential esterase was selectively enriched based on the time-dependent profile of esterases biosynthesis, thereby the enantiomeric excess of biotransformation product (eep) was constantly increased, finally maintained at 95 % (S). To improve the yield, various organic solvents were employed for better dispersion of the hydrophobic substrate. As a result, (±)-DMCPM of up to 400 mM in the organic phase of isooctane was enantioselectively hydrolyzed into (S)-(+)-DMCPA, with an isolation yield of 38 % and a further increase of eep to 99 %.
Co-reporter:Li-Ming Ouyang;Jia-Ying Liu;Ming Qiao
Applied Biochemistry and Biotechnology 2013 Volume 169( Issue 1) pp:15-28
Publication Date(Web):2013 January
DOI:10.1007/s12010-012-9949-4
Environmental DNA from soil and water samples was extracted to construct a plasmid library and a fosmid library containing 19,500 and 20,400 clones, respectively. Two esterases (EstP2K and EstF4K) were finally isolated from each library based on activity screening, and both of them were characterized in this study. The esterase EstF4K consists of 396 amino acids with an SMTK motif which belongs to family VIII esterase/lipase. The amino acid sequence of EstF4K showed 83 % identity with that of EstA3, a reported esterase isolated from uncultured organisms of soil. EstP2K is composed of 224 amino acids in size and shows only 37 % identity with a putative lipase of Neisseria elongata subsp. The purified EstF4K was optimally active at pH 8.0 and 50 °C. It was remarkably active and very stable in the presence of 30 % dimethyl sulfoxide. Activity fingerprint of EstF4K displayed a higher level of activity toward short-chain fatty acid p-nitrophenyl (pNP) esters, while EstP2K preferred bias for pNP caprylate ester. The optimum reaction temperature and pH for EstP2K are 45 °C and 7.5, respectively, and the enzyme exhibited strong tolerance in the presence of 30 % methanol. EstF4K and EstP2K showed opposite enantioselectivity for methyl 3-phenylglycidate, a chiral synthon for the synthesis of Taxol® side chain.
Co-reporter:Minh-Thu Ngo-Thi;Jin-Gang Yin;Jiang Pan
Applied Biochemistry and Biotechnology 2013 Volume 170( Issue 8) pp:1974-1981
Publication Date(Web):2013 August
DOI:10.1007/s12010-013-0355-3
Production of l-menthol by bioprocesses attracts increasing attention nowadays. Herein, we attempted to develop a bioresolution process for production of l-menthol through enantioselective hydrolysis of dl-menthyl benzoate using a newly isolated bacterium from soil samples. Among 129 active soil isolates screened rapidly by thin-layer chromatography, an outstanding bacterial strain numbered ECU2040, which was subsequently identified as Acinetobacter species, was finally selected as our target enzyme producer due to its highest activity and the best enantioselectivity toward l-substrate as confirmed by chiral gas chromatography. The catalytic performance of the cell-free extract from Acinetobacter sp. ECU2040 was preliminarily examined, indicating that its optimal pH and temperature for the reaction were 7.5 and 37 °C, respectively. Under the optimal conditions, the enzymatic reaction was performed on a 1-L scale, affording l-menthol in 48 % yield and 71 % ee.
Co-reporter:Guo-Chao Xu, Hui-Lei Yu, Xiao-Yan Zhang, and Jian-He Xu
ACS Catalysis 2012 Volume 2(Issue 12) pp:2566
Publication Date(Web):November 1, 2012
DOI:10.1021/cs300430g
By genome data mining, a carbonyl reductase tool box was designed and developed for chiral alcohol synthesis. On the basis of systematic comparison of the specific activity and substrate tolerance toward α-chloroacetophenone among reductases in this tool box, KtCR, a highly substrate-/product-tolerant carbonyl reductase from Kluyveromyces thermotolerans, was identified. The reduction of a series of substituted aryl ketones was investigated using this newly mined biocatalyst. Almost all of the ketones tested were asymmetrically reduced into corresponding chiral alcohols in 99% ee. Substrates with substituents adjacent to the carbonyl group or those with substituents on the para position of the phenyl ring were easier to reduce. For α-choloacetophenone as a representative substrate, as much as 154 g/L (1.0 M) of the substrate was asymmetrically reduced within merely 12 h by lyophilized cells of Escherichia coli/pET28-KtCR, resulting in an isolated yield of 92%, an enantiopurity of >99% ee, and a total turnover number of 5000, which was five times higher than the highest record reported so far. These results indicate the great potential of KtCR in practical synthesis of valuable aryl halohydrins as versatile chiral synthons.Keywords: aryl halohydrin; asymmetric hydrogen transfer; carbonyl reductase; genome data mining; Kluyveromyces thermotolerans; substrate/product tolerance
Co-reporter:Nai-Dong Shen, Yan Ni, Hong-Min Ma, Li-Juan Wang, Chun-Xiu Li, Gao-Wei Zheng, Jie Zhang, and Jian-He Xu
Organic Letters 2012 Volume 14(Issue 8) pp:1982-1985
Publication Date(Web):April 5, 2012
DOI:10.1021/ol300397d
A new reductase, CgKR2, with the ability to reduce ethyl 2-oxo-4-phenylbutyrate (OPBE) to ethyl (R)-2-hydroxy-4-phenylbutyrate ((R)-HPBE), an important chiral precursor for angiotensin-converting enzyme (ACE) inhibitors, was discovered. For the first time, (R)-HPBE with >99% ee was produced via bioreduction of OPBE at 1 M without external addition of cofactors. The space-time yield (700 g·L–1·d–1) was 27 times higher than the highest record.
Co-reporter:Hongmin Ma;Linlin Yang;Yan Ni;Jie Zhang;Chun-Xiu Li;Gao-Wei Zheng;Huaiyu Yang
Advanced Synthesis & Catalysis 2012 Volume 354( Issue 9) pp:1765-1772
Publication Date(Web):
DOI:10.1002/adsc.201100366
Abstract
In order to search for oxidoreductases suitable for the preparation of methyl (R)-o-chloromandelate [(R)-CMM], the key intermediate for clopidogrel, the homologous proteins of Gre2p were expressed in Escherichia coli, among which CgKR1 showed the most satisfactory activity and stereoselectivity towards methyl o-chlorobenzoylformate (CBFM). Using the crude enzyme of CgKR1 and glucose dehydrogenase (GDH), as much as 300 g⋅L−1 of CBFM was almost stoichiometrically converted to (R)-CMM with excellent enantiomeric excess (98.7% ee). More importantly, the reaction could be performed without external addition of an expensive cofactor. The substrate profile indicates that keto esters serve as the most suitable substrate, which was confirmed by gram-scale preparations. Homology modeling and docking analysis revealed the molecular basis for the high stereoselectivity of CgKR1. These demonstrate not only the feasibility of in silico mining of novel enzymes based on sequence homology but also the applicability of this new reductase for the practical production of optically active (R)-CMM.
Co-reporter:Yan Ni, Jiang Pan, Hong-Min Ma, Chun-Xiu Li, Jie Zhang, Gao-Wei Zheng, Jian-He Xu
Tetrahedron Letters 2012 Volume 53(Issue 35) pp:4715-4717
Publication Date(Web):29 August 2012
DOI:10.1016/j.tetlet.2012.06.097
Biocatalytic reduction of methyl o-chlorobenzoylformate (CBFM) provides a green and direct access to methyl (R)-o-chloromandelate [(R)-CMM], an intermediate for a platelet aggregation inhibitor named clopidogrel. As much as 500 g L−1 of CBFM was stoichiometrically converted into enantiopure (R)-CMM at 20 °C by using a whole-cell catalyst coexpressing an aldo-keto reductase from Bacillus sp. and a glucose dehydrogenase (GDH). In addition to the high productivity of 812 g L−1 d−1, this new whole-cell reduction is attractive by eliminating the need of an added external cofactor.
Co-reporter:Dan Wang;Jie Sun;Hui-Lei Yu;Chun-Xiu Li
Applied Biochemistry and Biotechnology 2012 Volume 166( Issue 1) pp:176-186
Publication Date(Web):2012 January
DOI:10.1007/s12010-011-9414-9
Either the natural biodegradation process or the industrial hydrolytic process requires synergistic interactions between various cellulases. However, it is sometimes impeded by low hydrolytic rate of existing cellulases and the lack of accessory enzymes. Herein, the ability of a commercial cellulase (Spezyme CP, from Genencor) to degrade steam explosion-pretreated corn stover was significantly improved. Firstly, a fungal cellulase producer, Aspergillus fumigatus ECU0811, was isolated from hundreds of soil samples. A 96-deep-well microscale-based platform was developed here to reduce the labor-intensive screening work and proved to be consistent with macroscale screening work. After optimization of fermentation, 3% corn cob could induce A. fumigatus ECU0811 to yield the highest cellulase production. Based on the high activities of β-glucosidase and xylanase by A. fumigatus ECU0811, 0.91 and 125 U/mg protein, respectively, an enzyme cocktail was composed with a fixed dosage of Spezyme CP (CPCel) at 14.2 filter paper units (FPU)/g glucan and varied dosages of A. fumigatus cellulase (AFCel). Consequently, the glucan-to-glucose conversion of corn stover was increased from 25.6% in the presence of CPCel at a dosage of 14.2 FPU/g glucan to 99.5% in the presence of the enzyme cocktail (14.2 FPU CPCel plus 1.21 FPU AFCel per gram of glucan). On the other side, it reduced the total protein amount of CPCel by as much as tenfold, which extremely improved the hydrolytic rate of Spezyme CP and reduced its dosage.
Co-reporter:Xin Ju;Hui-Lei Yu;Jiang Pan
Bioprocess and Biosystems Engineering 2012 Volume 35( Issue 3) pp:323-331
Publication Date(Web):2012 March
DOI:10.1007/s00449-011-0570-7
We optimized culture medium and batch-fed fermentation conditions to enhance production of an acetyl esterase from Pseudomonas sp. ECU1011 (PSAE). This enzyme enantioselectively deacetylates α-acetoxyphenylacetic acid. The medium was redesigned by single-factor and statistical optimization. The addition of ZnSO4 enhanced enzyme production by 37%. Yeast extract concentration was directly associated with the enzyme production. The fermentation was scaled up in a 5-l fermenter with the optimized medium, and the correlations between enzyme production and dissolved oxygen, pH, and feeding strategy were investigated. The fermentation process was highly oxygen-demanding, pH sensitive and mandelic acid-inducible. The fermentation pH was controlled at 7.5 by a pH and dissolved oxygen feedback strategy. Feeding mandelic acid as both a pH regulator and an enzyme inducer increased the enzyme production by 23%. The results of the medium redesign experiments were confirmed and explained in fed-batch culture experiments. Mathematical models describing the fermentation processes indicated that the enzyme production was strongly associated with cell growth. The optimized pH and dissolved oxygen stat fed-batch process resulted high volumetric production of PSAE (4166 U/l, 7.2-fold higher than the initial) without enantioselectivity decline. This process has potential applications for industrial production of chiral mandelic acid or its derivatives.
Co-reporter:Chen-Sheng Zhang;Zhi-Jun Zhang;Chun-Xiu Li
Applied Microbiology and Biotechnology 2012 Volume 95( Issue 1) pp:91-99
Publication Date(Web):2012 July
DOI:10.1007/s00253-012-3993-4
(R)-o-Chloromandelic acid is the key precursor for the synthesis of Clopidogrel®, a best-selling cardiovascular drug. Although nitrilases are often used as an efficient tool in the production of α-hydroxy acids, there is no practical nitrilase specifically developed for (R)-o-chloromandelic acid. In this work, a new nitrilase from Labrenzia aggregata (LaN) was discovered for the first time by genomic data mining, which hydrolyzed o-chloromandelonitrile with high enantioselectivity, yielding (R)-o-chloromandelic acid in 96.5% ee. The LaN was overexpressed in Escherichia coli BL21 (DE3), purified, and its catalytic properties were studied. When o-chloromandelonitrile was used as the substrate, the Vmax and Km of LaN were 2.53 μmol min−1 mg−1 protein and 0.39 mM, respectively, indicating its high catalytic efficiency. In addition, a study of substrate spectrum showed that LaN prefers to hydrolyze arylacetonitriles. To relieve the substrate inhibition and to improve the productivity of LaN, a biphasic system of toluene–water (1:9, v/v) was adopted, in which o-chloromandelonitrile of 300 mM (apparent concentration, based on total volume) could be transformed by LaN in 8 h, giving an isolated yield of 94.5%. The development of LaN makes it possible to produce (R)-o-chloromandelic acid by deracemizing o-chloromandelonitrile with good ee value and high substrate concentration.
Co-reporter:Jiao-Jiao Shangguan;Li-qiang Fan;Xin Ju
Applied Biochemistry and Biotechnology 2012 Volume 168( Issue 7) pp:1820-1833
Publication Date(Web):2012 December
DOI:10.1007/s12010-012-9899-x
A 1,080-bp cDNA (CGMCC 2873) encoding of a cold-active lipase of Aspergillus fumigatus (AFL67) was cloned and expressed in Escherichia coli for the first time. The new lipase, AFL67, was one-step purified by 8.30 folds through Ni–NTA affinity chromatography with a recovery of 86.8 %. The specific activity of purified AFL67 was 449 U mg−1 on p-NP hexanoate. AFL67 preferentially hydrolyzed p-nitrophenyl esters of short- and medium-chain fatty acids, with p-nitrophenyl hexanoate the maximum. The optimum temperature and pH was 15 °C and 7.5, respectively. The purified AFL67 was stable at 10–25 °C for 30 min, and in the pH range of 6.0–9.0 for 16 h (at 4 °C). Its activity was increased by 47 and 50 %, in the presence of 10 % (v/v) ethanol and isopropanol, respectively. The new lipase AFL67 highly enantioselectively deacylated (S)-α-acetoxyphenylacetic acid (APA) and o-Cl-APA, m-Cl-APA, and p-Cl-APA to (S)-mandelic acid and its derivates. These features render this cold-active novel lipase AFL67 attractive for biotechnological applications in the field of enantioselective synthesis of chiral mandelic acids, o-acylated mandelic acids, and their derivates and detergent additives.
Co-reporter:Jing Zhao;Yan-Yan Chu;Ai-Tao Li;Xin Ju;Xu-Dong Kong;Jiang Pan;Yun Tang
Advanced Synthesis & Catalysis 2011 Volume 353( Issue 9) pp:1510-1518
Publication Date(Web):
DOI:10.1002/adsc.201100031
Abstract
A novel epoxide hydrolase (BMEH) with unusual (R)-enantioselectivity and very high activity was cloned from Bacillus megaterium ECU1001. Highest enantioselectivities (E>200) were achieved in the bioresolution of ortho-substituted phenyl glycidyl ethers and para-nitrostyrene oxide. Worthy of note is that the substrate structure remarkably affected the enantioselectivities of the enzyme, as a reversed (S)-enantiopreference was unexpectedly observed for the ortho-nitrophenyl glycidyl ether. As a proof-of-concept, five enantiopure epoxides (>99% ee) were obtained in high yields, and a gram-scale preparation of (S)-ortho-methylphenyl glycidyl ether was then successfully performed within a few hours, indicating that BMEH is an attractive biocatalyst for the efficient preparation of optically active epoxides.
Co-reporter:Yan Ni;Chun-Xiu Li;Jie Zhang;Nai-Dong Shen;Uwe T. Bornscheuer
Advanced Synthesis & Catalysis 2011 Volume 353( Issue 8) pp:1213-1217
Publication Date(Web):
DOI:10.1002/adsc.201100132
Abstract
A β-ketoacyl-ACP reductase (FabG) gene from Bacillus sp. ECU0013 was heterologously overexpressed in Escherichia coli and the encoded protein was purified to homogeneity. The recombinant reductase could reduce a broad spectrum of prochiral ketones including aromatic ketones and keto esters and showed the highest activity in the asymmetric reduction of ethyl 2-oxo-4-phenylbutyrate (OPBE). Using E. coli cells coexpressing both FabG and glucose dehydrogenase (GDH) genes, as much as 620 g⋅L−1 of OPBE was almost stoichiometrically converted to ethyl (S)-2-hydroxy-4-phenylbutyrate [(S)-HPBE] with excellent (>99%) enantiomeric excess. More importantly, the process could be performed smoothly without external addition of an expensive cofactor as usually done and could be scaled up very easily. All these positive features demonstrate the applicability of this reductase for the large-scale production of optically active α-hydroxy acids/esters.
Co-reporter:Yan Ni, Chun-Xiu Li, Li-Juan Wang, Jie Zhang and Jian-He Xu
Organic & Biomolecular Chemistry 2011 vol. 9(Issue 15) pp:5463-5468
Publication Date(Web):28 Apr 2011
DOI:10.1039/C1OB05285C
A carbonyl reductase gene (yueD) from Bacillus sp. ECU0013 was heterologously overexpressed in Escherichia coli, and the encoded protein (BYueD) was purified to homogeneity and characterized. The NADPH-dependent reductase showed a broad substrate spectrum towards different aromatic ketones, and α- and β-ketoesters. Although the enantioselectivity was high to moderate for the reduction of α-ketoesters, all the tested β-ketoesters and aromatic ketones were reduced to the corresponding chiral alcohols in enantiomerically pure forms. Furthermore, the practical applicability of this enzyme was evaluated for the reduction of ethyl 4-chloro-3-oxobutanoate (1a). Using Escherichia colicells coexpressing BYueD and glucose dehydrogenase, 215 g L−1 (1.3 M) of 1a was stoichiometrically converted to ethyl (R)-4-chloro-3-hydroxybutanoate ((R)-1b) in an aqueous-toluene biphasic system by using a substrate fed-batch strategy, resulting in an overall hydroxyl product yield of 91.7% with enantiomeric purity of 99.6% ee.
Co-reporter:Jun-Feng Liu;Zhi-Jun Zhang;Ai-Tao Li;Jiang Pan
Applied Microbiology and Biotechnology 2011 Volume 89( Issue 3) pp:665-672
Publication Date(Web):2011 February
DOI:10.1007/s00253-010-2866-y
The production of a recombinant nitrilase expressed in Escherichia coli JM109/pNLE was optimized in the present work. Various culture conditions and process parameters, including medium composition, inducer, induction condition, pH and temperature, were systematically examined. The results showed that nitrilase production in E. coli JM109/pNLE was greatly affected by the pH condition and the temperature in batch culture, and the highest nitrilase production was obtained when the fermentation was carried out at 37°C, initial pH 7.0 without control and E. coli was induced with 0.2 mM isopropyl-β-d-thiogalactoside at 4.0 h. Furthermore, enzyme production could be significantly enhanced by adopting the glycerol feeding strategy with lower flow rate. The enzyme expression was also authenticated by sodium dodecyl phosphate polyacrylamide gel electrophoresis analysis. Finally, under the optimized conditions for fed-batch culture, cell growth, specific activity and nitrilase production of the recombinant E. coli were increased by 9.0-, 5.5-, and 50-fold, respectively.
Co-reporter:Qian-Qian Shi;Jie Sun;Hui-Lei Yu;Chun-Xiu Li
Applied Biochemistry and Biotechnology 2011 Volume 164( Issue 6) pp:819-830
Publication Date(Web):2011 July
DOI:10.1007/s12010-011-9176-4
A fungal strain, marked as ECU0913, producing high activities of both cellulase and xylanase was newly isolated from soil sample collected near decaying straw and identified as Penicillium sp. based on internal transcribed spacer sequence homology. The cultivation of this fungus produced both cellulase (2.40 FPU/ml) and xylanase (241 IU/ml) on a stepwisely optimized medium at 30 °C for 144 h. The cellulase and xylanase from Penicillium sp. ECU0913 was stable at an ambient temperature with half-lives of 28 and 12 days, respectively. Addition of 3 M sorbitol greatly improved the thermostability of the two enzymes, with half-lives increased by 2.3 and 188-folds, respectively. Catalytic performance of the Penicillium cellulase and xylanase was evaluated by the hydrolysis of corn stover pretreated by steam explosion. With an enzyme dosage of 50 FPU/g dry substrate, the conversions of cellulose and hemicellulose reached 77.2% and 47.5%, respectively, without adding any accessory enzyme.
Co-reporter:Jian-Dong Zhang;Ai-Tao Li;Hui-Lei Yu
Journal of Industrial Microbiology & Biotechnology 2011 Volume 38( Issue 5) pp:633-641
Publication Date(Web):2011 May
DOI:10.1007/s10295-010-0809-3
A cytochrome P450 monooxygenase (P450SMO) from Rhodococcus sp. can catalyze asymmetric oxygenation of sulfides to S-sulfoxides. However, P450SMO-catalyzed biotransformations require a constant supply of NAD(P)H, the expense of which constitutes a great hindrance for this enzyme application. In this study, we investigated the asymmetric oxygenation of sulfide to S-sulfoxide using E. coli cells, which co-express both the P450SMO gene from Rhodococcus sp. and the glucose dehydrogenase (GDH) gene from Bacillus subtilis, as a catalyst. The results showed that the catalytic performance of co-expression systems was markedly improved compared to the system lacking GDH. When using recombinant E. coli BL21 (pET28a-P450-GDH) whole cell as a biocatalyst, NADPH was efficiently regenerated when glucose was supplemented in the reaction system. A total conversion of 100% was achieved within 12 h with 2 mM p-chlorothioanisole substrate, affording 317.3 mg/L S-sulfoxide obtained. When the initial sulfide concentration was increased to 5 mM, the substrate conversion was also increased nearly fivefold: S-sulfoxide amounted to 2.5 mM (396.6 mg/L) and the ee value of sulfoxide product exceeded 98%. In this system, the effects of glucose concentration and substrate concentration were further investigated for efficient biotransformation. This system is highly advantageous for the synthesis of optically pure S-sulfoxide.
Co-reporter:Zhi-Jun Zhang;Yu-Cai He
Bioprocess and Biosystems Engineering 2011 Volume 34( Issue 3) pp:315-322
Publication Date(Web):2011 March
DOI:10.1007/s00449-010-0473-z
A nitrilase gene from Alcaligenes sp. ECU0401 was cloned and overexpressed in Escherichia coli BL21 (DE3) in a soluble form. The encoded protein with a His6-tag was purified to nearly homogeneity as revealed by SDS-PAGE with a molecular weight of approximately 38.5 kDa, and the holoenzyme was estimated to be composed of 10 subunits of identical size by size exclusion chromatography. The Vmax and Km parameters were determined to be 27.9 μmol min−1 mg−1 protein and 21.8 mM, respectively, with mandelonitrile as the substrate. The purified enzyme was highly thermostable with a half life of 155 h at 30 °C and 94 h at 40 °C. Racemic mandelonitrile (50 mM) could be enantioselectively hydrolyzed to (R)-(−)-mandelic acid by the purified nitrilase with an enantiomeric excess of 97%. The extreme stability, high activity and enantioselectivity of this nitrilase provide a solid base for its practical application in the production of (R)-(−)-mandelic acid.
Co-reporter:Jiao-Jiao Shangguan;Yu-Qiang Liu;Fu-Jun Wang
Applied Biochemistry and Biotechnology 2011 Volume 165( Issue 3-4) pp:949-962
Publication Date(Web):2011 October
DOI:10.1007/s12010-011-9311-2
A novel lipase gene from Aspergillus fumigatus, afl1-1, was cloned and expressed with a molecular mass of 38 kDa in Escherichia coli for the first time. The recombinant lipase had a preference for short carbon chain p-nitrophenyl esters, especially toward C2 p-nitrophenyl ester and exhibited potent hydrolysis activity that had not been observed. The optimum pH and temperature of this new enzyme were 8.5 and 65 °C, respectively. The recombinant lipase (AFL1-1) is an alkaline enzyme which was stable in the pH range 6.0∼8.5 for 16 h (at 4 °C) and at 30∼50 °C for 1 h. It is an intracellular enzyme which was purified approximately 8.47-fold with an overall yield of 86.1% by single-step Ni-NTA affinity purification, with a very high specific activity of approximately 1.00 × 103 U mg−1 on a standard substrate of p-nitrophenyl acetate. The Michaelis–Menten kinetic parameters Vmax and Km of the lipase were 1.37 mM mg−1 min−1 and 14.0 mM, respectively. Ca2+ and other metal ions could not activate the lipase. According to the homology analysis and site-directed mutagenesis assay, the catalytic triad of the recombinant lipase was identified as Ser-165, Asp-260, and His-290 residues.
Co-reporter:Li-Huan Qiu;Chun-Xiu Li;Jie Sun;Zhilong Wang
Applied Biochemistry and Biotechnology 2011 Volume 165( Issue 7-8) pp:1473-1484
Publication Date(Web):2011 December
DOI:10.1007/s12010-011-9368-y
As one critical enzyme in deconstructing complicated cellulose matrix, endoglucanase (EG) is needed to exhibit high activity and thermostability under severe industrial conditions. Driven by this purpose, EGtf1 (Q08166) and EGtf2 (Q7X2N2), with relatively high specific activities, were selected out of 43 putative EG genes from SWISS-PROT database. These distinguished EGs were successfully overexpressed in Escherichia coli and purified by one-step affinity chromatography. The maximal activity was shown at approximate pH 5.0 and 50 °C. It is worth noting that EGtf1 and EGtf2 displayed outstanding thermostability with a half-life of up to 1,386 h at 50 °C, which is almost 100-fold higher than other reported EGs. Furthermore, the presence of various metal ions (1 mM) or organic solvents (50%, v/v) did not cause significant effect on the activities of EGtf1 and EGtf2 and even showed 2.1- and 2.7-fold enhancement in the case of dodecanol. All these features, especially the excellent thermostability of EGtf1 and EGtf2, enable them to become a good candidate for further protein engineering to realize the ultimate practical application in biomass industry.
Co-reporter:Bing Chen, Hai-Feng Yin, Zhen-Sheng Wang, Jia-Ying Liu and Jian-He Xu
Chemical Communications 2010 vol. 46(Issue 16) pp:2754-2756
Publication Date(Web):25 Feb 2010
DOI:10.1039/B925402A
A new chemo-enzymatic route to both isomers of 2-hydroxy-4-phenylbutyric acid is reported. The key step is the lactonase-catalyzed hydrolysis of cis- and trans-2-hydroxy-4-phenyl-4-butyrolactones followed by hydrogenation over Pd/C to afford optically pure 2-hydroxy-4-phenylbutyric acid.
Co-reporter:Qing Dong, Li-Ming Ouyang, Hui-Lei Yu, Jian-He Xu
Carbohydrate Research 2010 Volume 345(Issue 11) pp:1622-1626
Publication Date(Web):19 July 2010
DOI:10.1016/j.carres.2010.04.025
Uridine diphosphate glucose (UDP-Glc) serves as a glucosyl donor in many enzymatic glycosylation processes. This paper describes a multiple enzyme, one-pot, biocatalytic system for the synthesis of UDP-Glc from low cost raw materials: maltodextrin and uridine triphosphate. Three enzymes needed for the synthesis of UDP-Glc (maltodextrin phosphorylase, glucose-1-phosphate thymidylytransferase, and pyrophosphatase) were expressed in Escherichia coli and then immobilized individually on amino-functionalized magnetic nanoparticles. The conditions for biocatalysis were optimized and the immobilized multiple-enzyme biocatalyst could be easily recovered and reused up to five times in repeated syntheses of UDP-Glc. After a simple purification, approximately 630 mg of crystallized UDP-Glc was obtained from 1 l of reaction mixture, for a moderate yield of around 50% (UTP conversion) at very low cost.Biosynthesis of UDP-Glc by one-pot reaction with multiple enzymes.
Co-reporter:Qing Dong, Li-Ming Ouyang, Hui-Lei Yu, Jian-He Xu, Guo-Qiang Lin
Tetrahedron Letters 2010 Volume 51(Issue 12) pp:1603-1605
Publication Date(Web):24 March 2010
DOI:10.1016/j.tetlet.2010.01.077
A system for the one-pot synthesis of diosgenyl-β-d-glucopyranoside (trillin) using multiple recombinant enzymes is developed. The enzymes maltodextrin phosphorylase (E1), glucose-1-phosphate thymidylyltransferase (E2), inorganic pyrophosphatase (E3), and solanidine glucosyltransferase (E4) involved in the work have been cloned and expressed in Escherichia coli. Under the optimized reaction conditions, the yield of trillin reached 28% (ca. 15.8 mg/l). The recovery yield of trillin after purification was 89%.A biocatalytic one-pot synthesis of trillin using the four recombinant multiple enzymes, maltodextrin phosphorylase (E1), glucose-1-phosphate thymidylyltransferase (E2), inorganic pyrophosphatase (E3), and solanidine glucosyltransferase (E4) in one pot is described.
Co-reporter:Bing Chen, Hai-Feng Yin, Zhen-Sheng Wang, Jian-He Xu
Tetrahedron: Asymmetry 2010 Volume 21(Issue 2) pp:237-240
Publication Date(Web):22 February 2010
DOI:10.1016/j.tetasy.2010.01.021
A new synthesis of harzialactone A together with its stereoisomers was achieved starting from phenyl acetone. The key step of this new route is the kinetic bioresolution of racemic cis- and trans-isomers by recombinant Escherichia coli JM109 cells expressing Fusarium proliferatum lactonase gene (reFPL). Harzialactone A was isolated in excellent ee (>99%), while moderate to good enantioselectivities (80% to >99% ee) were obtained for its isomers.
Co-reporter:Bing Chen;Li-Qiang Fan;Jian Zhao
Applied Biochemistry and Biotechnology 2010 Volume 162( Issue 3) pp:744-756
Publication Date(Web):2010 October
DOI:10.1007/s12010-009-8819-1
The levo-lactonase gene of Fusarium proliferatum ECU2002 (EC3.1.1.25) was cloned and expressed in Escherichia coli JM109 (DE3) for biocatalytic resolution of industrially important chiral lactones, including DL-pantoyl lactone which was a key precursor to calcium d-pantothenate. By increasing the biomass concentration and lowering the inducer (isopropyl-β-d-thiogalactoside) concentration and induction temperature, the lactonase production was significantly enhanced up to 20 kU/L, which was 20 times higher than that of wild-type strain F. proliferatum ECU2002. The recombinant Fusarium lactonase was purified using immobilized metal affinity chromatography, and its SDS-PAGE revealed a molecular mass of 50 kDa for the recombinant protein, suggesting that the enzyme was a simplex protein. Furthermore, biocatalytic properties of the recombinant lactonase were investigated, including kinetic parameters, additive’s effect, and substrate specificity. The results reported in this paper provide a feasible method to make the whole cells of E. coli JM109 (DE3) expressing lactonase gene to be a highly efficient and easy-to-make biocatalyst for asymmetric synthesis of chiral compounds.
Co-reporter:Jin-Huan Su;Zhi-Long Wang
Applied Biochemistry and Biotechnology 2010 Volume 160( Issue 4) pp:1116-1123
Publication Date(Web):2010 February
DOI:10.1007/s12010-009-8570-7
In this study, several nonionic surfactants were tried to improve the enzymatic hydrolysis of ginsenoside Rg3 into Rh2 which was catalyzed at 50 °C and pH 5.0 by a crude glucosidase extracted from Fusarium sp. ECU2042. Among the biocompatible nonionic surfactants, polyethylene glycol 350 monomethyl ether was shown to be the best. After optimizing some influencing factors on the reaction, the conversion of Rg3 (5 g/l) with 10 g/l crude enzyme reached almost 100% in the presence of the nonionic surfactant (7.5%, w/v), which was 25% higher than that in buffer without any surfactant. Furthermore, the enzyme stability was affected faintly by the surfactant.
Co-reporter:Li-Li Zhao;Xiao-Xia Chen
World Journal of Microbiology and Biotechnology 2010 Volume 26( Issue 3) pp:537-543
Publication Date(Web):2010 March
DOI:10.1007/s11274-009-0203-3
Industrial strain improvement plays a central role in the commercial development of microbial fermentation processes. The strain of Serratia marcescens ECU1010, a wild-type lipase-producer capable of stereospecific synthesis of a Diltiazem precursor, was subjected to physical mutation involving treatment by UV-irradiation for 30 s. A mutant strain, no. UV-01, showed enhanced lipase production, but lost the capability of producing red pigment (prodigiosin). The variant strain UV-01 had a 2.3-fold higher activity than the wild type and was stable in its enzyme production for ten serial transfers. For reduction of the fermentation medium cost, dried powder of corn steep liquor was used as an inexpensive substitute for beef extract in the medium. Dextrin as an organic carbon source and Tween-80 as an important element were further optimized, respectively. The high primary biodegradation of the Tween-80 by S. marcescens ECU1010 and its variant demonstrated their potential ability of degrading alkyl polyethoxylates to remove harmful nonionic surfactants from polluted effluents and streams. The optimal cultivation time for lipase biosynthesis was 24 h. These optimized compositions resulted in an economic production of lipase by S. marcescens ECU1010 var. UV-01, with a dramatically reduced cost (1/8–1/7 of the initial one) which is more suitable for industrial application.
Co-reporter:Xiang Liu;Jiang Pan;Jing Zhao
Applied Biochemistry and Biotechnology 2010 Volume 162( Issue 6) pp:1574-1584
Publication Date(Web):2010 November
DOI:10.1007/s12010-010-8939-7
An (S)-enantioselective esterase from Bacillus subtilis ECU0554, named BsE-NP01, has been cloned and over-expressed in a heterologous host Escherichia coli BL21. BsE-NP01 was shown to be a carboxylesterase with a molecular mass of about 32 kDa, and temperature and pH optima at 50 °C and 8.5, respectively. It could catalyze the selective hydrolysis of the (S)-enantiomer of racemic naproxen methyl ester, giving optically pure (S)-naproxen with 98% enantiomeric excess. A mechanic-grinding approach to substrate dispersion was also reported, which was considered to be an alternative to take the place of deleterious surfactants such as Tween-80, with improved performance of the hydrolysis reaction. Batch production of (S)-naproxen was repeatedly carried out in a solid-water biphasic system at 2-L scale, achieving an average total yield of about 85% after ten runs with complete recycling of (R)-substrate.
Co-reporter:Yu-Cai He;Jin-Huan Su;Li Zhou
Applied Biochemistry and Biotechnology 2010 Volume 160( Issue 5) pp:1428-1440
Publication Date(Web):2010 March
DOI:10.1007/s12010-009-8607-y
Alcaligenes sp. ECU0401 has been isolated from soil samples with high nitrilase activity against glycolonitrile using the enrichment culture technique. The preferred carbon/nitrogen sources and metal ions were sodium acetate, a composite of peptone and yeast extract, and Cu2+, respectively. Glycolic acid was obtained in a yield of 96.5% after 14 h of biotransformation from a total of 200 mM glycolonitrile in the mode of sequential addition during the cultivation of Alcaligenes sp. ECU0401 in a 5-L jar fermenter. Fifty micromolars of glycolonitrile could be hydrolyzed in a yield of 94.1% by resting cells after 36 h. The microbial nitrilase system could hydrolyze various nitriles with high activity, and no amidase activity and glycolic acid were observed in hydrolyzing glycolamide. It significantly exhibited high enantioselectivity in the hydrolysis of mandelonitrile and 2-chloromandelonitrile (>99.9% e.e.p). Efficient biocatalyst recycling was achieved as a result of immobilization in glutaraldehyde/polyethylenimine cross-linked carrageenan with immobilized cells exhibiting a biocatalyst productivity of 1,042.2 g glycolic acid per gram dry cell weight after 29 batch recycles.
Co-reporter:Li-Li Zhao;Jiang Pan
Biotechnology and Bioprocess Engineering 2010 Volume 15( Issue 2) pp:199-207
Publication Date(Web):2010 April
DOI:10.1007/s12257-009-0173-1
The lipase from Serratia marcescence ECU1010 (Sml) was capable of enantioselectively catalyzing the synthesis of many chiral drug precursors. This paper investigated the immobilization of Sml on appropriate supporting materials and its performance in bioreactor. Chitosan, Celite 545, and DEAE-cellulose were found to be the ideal supports among 8 carriers tested with respect to enzyme load and activity recovery of lipase. When Sml was immobilized, significant improvements of stability against pH, thermal, and operational deactivation were observed with all the 3 better supports, and the best stability was observed when the lipase was immobilized on glutaraldehyde activated chitosan. As for the effect of organic solvent in the biphasic reaction system, the hydrolytic activity of the immobilized lipase on trans-3-(4′-methoxyphenyl)glycidic acid methyl ester ((±)-MPGM) observed in isopropyl ether was 6 and 3 times higher than those in toluene and methyl tert-butyl ether. The lipasecatalyzed production of (−)-MPGM by enzymatic resolution of (±)-MPGM with chitosan-Sml in isopropyl etherwater biphasic system was carried out in a 2 L stirred-tank reactor. The batch operation was more efficient operation mode for the enantioselective hydrolysis of (±)-MPGM, affording enantiopure (−)-MPGM in 44.3% overall yield, in contrast to 29.3% in a continuous reactor.
Co-reporter:Jian-Dong Zhang;Ai-Tao Li
Bioprocess and Biosystems Engineering 2010 Volume 33( Issue 9) pp:1043-1049
Publication Date(Web):2010 November
DOI:10.1007/s00449-010-0429-3
Escherichia coli BL21 as production strain for the production of cytochrome P450 monooxygenase (P450SMO) from Rhodococcus sp. in high yields was developed. The expression was first optimized with a series of flask experiments testing several key parameters for their influence on the expression level and enzyme activity. The optimal process parameters found in the flask experiments were verified in a cultivation process in a 5-L bioreactor. Glycerol proved to be superior over glucose as carbon source. Low dissolved oxygen (DO) concentration (<10%) during expression was found to be critical for active P450s production, resulting in expression level of 400 nM for P450SMO. Intact cells were used to establish an efficient bioconversion system for the production of sulfoxidation product. With p-chlorothioanisole as a representative substrate, the desired product (S-sulfoxide) was afforded with 99% ee and highest production of 130 mg/L within 12 h.
Co-reporter:Xin Ju;Hui-Lei Yu;Jiang Pan;Dong-Zhi Wei
Applied Microbiology and Biotechnology 2010 Volume 86( Issue 1) pp:83-91
Publication Date(Web):2010 March
DOI:10.1007/s00253-009-2286-z
Substrate-directed screening was carried out to find bacteria that could deacylate O-acetylated mandelic acid from environmental samples. From more than 200 soil isolates, we identified for the first time that Pseudomonas sp. ECU1011 biocatalytically deacylated (S)-α-acetoxyphenylacetic acid with high enantioselectivity (E > 200), yielding (S)-mandelic acid with 98.1% enantiomeric excess (ee) at a 45.5% conversion rate. The catalytic deacylation of (S)-α-acetoxyphenylacetic acid by the resting cell was optimized using a single-factor method to yield temperature and pH optima of 30°C and 6.5, respectively. These optima help to reduce the nonselective spontaneous hydrolysis of the racemic substrate. It was found that substrate concentrations up to 60 mM could be used. 2-Propanol was used as a moderate cosolvent to help the substrate disperse in the aqueous phase. Under optimized reaction conditions, the ee of the residual (R)-α-acetoxyphenylacetic acid could be improved further, to greater than 99%, at a 60% conversion rate. Furthermore, using this newly isolated strain of Pseudomonas sp. ECU1011, three kinds of optically pure analogs of (S)-mandelic acid and (R)-α-acetoxyphenylacetic acid were successfully prepared at high enantiomeric purity.
Co-reporter:Jian-Dong Zhang;Ai-Tao Li;Yi Yang
Applied Microbiology and Biotechnology 2010 Volume 85( Issue 3) pp:615-624
Publication Date(Web):2010 January
DOI:10.1007/s00253-009-2118-1
In this study, a 3.7-kb DNA fragment was cloned from Rhodococcus sp. ECU0066, and the sequence was analyzed. It was revealed that the largest one (2,361 bp) of this gene fragment encodes a protein consisting of 787 amino acids, with 73% identity to P450RhF (accession number AF45924) from Rhodococcus sp. NCIMB 9784. The gene of this new P450 monooxygenase (named as P450SMO) was successfully expressed in Escherichia coli BL21 (DE3), and the enzyme was also purified and characterized. In the presence of reduced nicotinamide adenine dinucleotide phosphate, the enzyme showed significant sulfoxidation activity towards several sulfides, with (S)-sulfoxides as the predominant product. The p-chlorothioanisole, p-fluorothioanisole, p-tolyl methyl sulfide, and p-methoxythioanisole showed relatively higher activities than the other sulfides, but the stereoselectivity for p-methoxythioanisole was much lower. The optimal activity of the purified enzyme toward p-chlorothioanisole occurred at pH 7.0 and 30°C. The current study is the first to report a recombinant cytochrome P450 enzyme of Rhodococcus sp. which is responsible for the asymmetric oxidation of sulfides. The new enzymatic activity of P450SMO on the above compounds makes it an attractive biocatalyst for asymmetric synthesis of enantiopure sulfoxides.
Co-reporter:Yu-Cai He;Zhi-Jun Zhang
Journal of Industrial Microbiology & Biotechnology 2010 Volume 37( Issue 7) pp:741-750
Publication Date(Web):2010 July
DOI:10.1007/s10295-010-0720-y
The nitrilase from Alcaligenesfaecalis ECU0401 belongs to the category of arylacetonitrilase, which could hydrolyze 2-chloromandelonitrile, 3,4-dimethoxyphenylacetonitrile, mandelonitrile, and phenylacetonitrile into the corresponding arylacetic acids. To overcome the permeability barrier and prepare whole cell biocatalysts with high activities, permeabilization of Alcaligenesfaecalis ECU0401 in relation to nitrilase activity was optimized by using cetyltrimethylammonium bromide (CTAB) as permeabilizing agent. The nitrilase activity from Alcaligenes faecalis ECU0401 increased 4.5-fold when the cells were permeabilized with 0.3% (w/v) CTAB for 20 min at 25°C and pH 6.5. Consequently, almost all the mandelonitrile was consumed and converted to (R)-(−)-mandelic acid with greater than 99.9% enantiomeric excess (e.e.) by the CTAB-permeabilized cells. The permeability barrier has been significantly reduced in the hydrolysis of mandelonitrile by using CTAB-permeabilized cells and a dynamic resolution was successfully achieved, giving a 100% theoretical yield of (R)-(−)-mandelic acid. Efficient biocatalyst recycling was achieved as a result of cell immobilization in calcium alginate, with a product-to-biocatalyst ratio of 3.82 g (R)-(−)-mandelic acid g−1 dry cell weight (dcw) cell after 20 cycles of repeated use.
Co-reporter:Gao-Wei Zheng;Hui-Lei Yu;Jian-Dong Zhang
Advanced Synthesis & Catalysis 2009 Volume 351( Issue 3) pp:405-414
Publication Date(Web):
DOI:10.1002/adsc.200800412
Co-reporter:Bing Chen;Hai-Feng Yin;Zhen-Sheng Wang;Li-Qiang Fan;Jian Zhao
Advanced Synthesis & Catalysis 2009 Volume 351( Issue 17) pp:2959-2966
Publication Date(Web):
DOI:10.1002/adsc.200900628
Abstract
A facile chemo-enzymatic process has been developed for producing stereoisomers of 4-substituted 2-hydroxy-4-butyrolactones with good to excellent enantioselectivity. This process involves an easy separation of the diastereoisomers by column chromatography and efficient enzymatic resolution by whole cells of Escherichia coli JM109 expressing Fusarium proliferatum lactonase gene. This biocatalyst shows strong tolerance towards different substrate structures and at least three out four possible isomers could be obtained in excellent enantiomeric purity. Different substrate concentrations (10 mM–200 mM) were examined, giving a substrate to catalyst ratio of up to 26:1. This general and efficient enzymatic process provides access to stereoisomers of 4-substituted 2-hydroxy-4-butyrolactones readily and cost-effectively. The stereochemical assignments were conducted systematically based on NMR, X-ray diffraction and circular dichroism, leading to further understanding of the enzyme’s stereoselectivity.
Co-reporter:Jian-He Xu;Jie Bao;Qing Yang
Applied Biochemistry and Biotechnology 2009 Volume 159( Issue 3) pp:
Publication Date(Web):2009 December
DOI:10.1007/s12010-009-8784-8
Co-reporter:Hui-Lei Yu, Jian-He Xu, Yu-Xiao Wang, Wen-Ya Lu and Guo-Qiang Lin
ACS Combinatorial Science 2008 Volume 10(Issue 1) pp:79
Publication Date(Web):December 7, 2007
DOI:10.1021/cc7001606
Glycoconjugates can be artificially synthesized by combinatorial biocatalysis. An example is given in this paper describing the construction of glycoconjugates array by using glycosidase and lipase in nonaqueous media. This array was started from glucose, with three aryl alcohols as the aglycone moiety of glycosides and five acids or esters as acyl donors for combinatorial acylation of glycosides, affording a three-dimensional array containing about 30 members with diverse structures. The array would be more abundant if more aglycones and acyl donors with other structures were filled in. Indeed, diverse classes of carbohydrates besides glucose can also be employed for generating diverse glycoconjugates due to their different roles in numerous physiological responses. The composition and distribution of the demonstration glycoconjugates array was detected and evaluated by HPLC-MS with electrospray ionization. And also, the distribution of the artificial array can be adjusted by changing the molar ratio of the auxiliary materials.
Co-reporter:Ling Ou, Yi Xu, Daniel Ludwig, Jiang Pan, and Jian He Xu
Organic Process Research & Development 2008 Volume 12(Issue 2) pp:192-195
Publication Date(Web):February 7, 2008
DOI:10.1021/op700253t
A process for preparing chiral secondary alcohols by chemoenzymatic deracemization was optimized. First, the transesterification process of 1-indanol and 1-phenylethanol with vinyl acetate as the acyl donor was optimized using lipase Novozym 435 as biocatalyst. The effects of acyl donors, substrate concentration, solvent type, and enzyme amount on activity and enantioselectivity of the said transesterification were investigated. Second,on the basis of the optimized conditions, an efficient biocatalytic resolution system was established with high selectivity, where volumetric productivity of the reaction against (R)-1-indanol and (R)-1-phenylethanol reached 529 and 198 g L−1 d−1, respectively, during reuse of the enzyme in repeated-batch transesterification reactions. After 10 batches of the reaction, the enzyme still remained stable. Finally, (R)-1-indanol and (R)-1-phenylethanol were obtained in 95% and 97% ee and in 67% and 71% isolated yields from the corresponding resolution mixture, through an in situ Mitsunobu inversion of the unreacted alcohols followed by chemical hydrolysis of (R)-acetates.
Co-reporter:Yu-Cai He;Jiang Pan;Li-Ming Ouyang
Bioprocess and Biosystems Engineering 2008 Volume 31( Issue 5) pp:445-451
Publication Date(Web):2008 August
DOI:10.1007/s00449-007-0181-5
An enantioselective mandelate-degrading bacterium, Alcaligenes sp. ECU0401, was newly isolated from soil. By fed-batch culture, (R)-(−)-mandelic acid was successfully prepared in a 5-L fermenter with 32.8% isolated yield and >99.9% enantiomeric excesses (e.e.) from totally 3.04% (w/v) of racemic mandelic acid after 99 h of biotransformation. The optimal reaction pH and temperature were 6.5 and 30 °C, respectively. Using the resting cell as a biocatalyst for asymmetric degradation of racemic mandelic acid and chloro-substituted derivatives thereof, (R)-(−)-mandelic acid, (R)-(−)-o-chloromandelic acid, (S)-(+)-m-chloromandelic acid and (S)-(+)-p-chloromandelic acid were recovered with high analytic yields and excellent enantiomeric excesses (e.e. > 99.9%). (R)-(−)-Mandelic acid could also be obtained after 12 h of biotransformation with 41.5% isolated yield and >99.9% e.e.
Co-reporter:Zhang-De Long;Jiang Pan
Applied Biochemistry and Biotechnology 2007 Volume 142( Issue 2) pp:148-157
Publication Date(Web):2007 August
DOI:10.1007/s12010-007-0023-6
Production of an extracellular lipase from Serratia marcescens ECU1010, which is an industrially important biocatalyst for the stereospecific synthesis of Diltiazem precusor, was carefully optimized in both shake flasks and a fermenter, using Tween-80 as the enzyme inducer. Dextrin and beef extract combined with ammonium sulfate were indicated to be the best carbon and nitrogen sources, respectively. With the increase of Tween-80 from 0 to 10 g l−1, the lipase production was greatly enhanced from merely 250 U l−1 to a maximum of 3,340 U l−1, giving the highest lipase yield of ca 640 U g−1 dry cell mass (DCW), although the maximum biomass (6.0 g DCW l−1) was achieved at 15 g l−1 of Tween-80. When the medium loading in shake flasks was reduced from 20 to 10% (v / v), the lipase production was significantly enhanced. The increase in shaking speed also resulted in an improvement of the lipase production, although the cell growth was slightly repressed, suggesting that the increase of dissolved oxygen (DO) concentration contributed to the enhancements of lipase yield. When the lipase fermentation was carried out in a 5-l fermenter, the lipase production reached a new maximum of 11,060 U l−1 by simply raising the aeration rate from 0.5 to 1.0 vvm, while keeping the dissolved oxygen above 20% saturation via intermittent adjustment of the agitation speed (≥400 rpm), in the presence of a relatively low concentration (2 g l−1) of Tween-80 to prevent a potential foaming problem, which is easy to occur in the intensively aerated fermenter.
Co-reporter:Xian Zhang;Yi Xu;Jiang Pan
Applied Microbiology and Biotechnology 2007 Volume 75( Issue 5) pp:1087-1094
Publication Date(Web):2007 July
DOI:10.1007/s00253-007-0941-9
A fungus strain ECU2002, capable of enantioselectively hydrolyzing chiral lactones to optically pure hydroxy acids, was newly isolated from soil samples through two steps of screening and identified as Fusarium proliferatum (Matsushima) Nirenberg. From the crude extract of F. proliferatum ECU2002, a novel levo-lactonase was purified to homogeneity, with a purification factor of 460-folds and an overall yield of 9.7%, by ultrafiltration, acetone precipitation, and chromatographic separation through DEAE-Toyopearl, Butyl-Toyopearl, Hydroxyapatite, Toyoscreen-Super Q, and TSK-gel columns. The purified enzyme is a monomer; with a molecular mass of ca 68 kDa and a pI of 5.7 as determined by two-dimensional electrophoresis. The catalytic performance of the partially purified levo-lactonase was investigated, giving temperature and pH optima at 50°C and 7.5, respectively, for γ-butyrolactone hydrolysis. The substrate specificity of the partially purified lactonase was also examined using several useful lactones, among which α-hydroxy-γ-butyrolactone was the best substrate, with 448-fold higher lactonase activity as compared to γ-butyrolactone. The F. proliferatum lactonase preferentially hydrolyzed the levo enantiomer of butyrolactones, including β-butyrolactone, α-hydroxy-γ-butyrolactone, α-hydroxy-β,β-dimethyl-γ-butyrolactone (pantolactone), and β-hydroxy-γ-butyrolactone, affording (+)-hydroxy acids in high (94.8∼98.2%) enantiomeric excesses (ee) and good conversions (38.2∼44.2%). A simple immobilization of the crude lactonase with glutaraldehyde cross-linking led to a stable and easy-to-handle biocatalyst for catalytic resolution of chiral lactones. The immobilized lactonase also performed quite well in repeated batch resolution of dl-pantolactone at a concentration of 35% (w/v), retaining 67% of initial activity after ten cycles of reaction (corresponding to a half life of 20 cycles) and affording the product in 94∼97% ee, which can be easily enhanced to >99% ee after the d-hydroxy acid was chemically converted into l-lactone and crystallized.
Co-reporter:Wei Yang, Jian-He Xu, Yan Xie, Yi Xu, Gang Zhao, Guo-Qiang Lin
Tetrahedron: Asymmetry 2006 Volume 17(Issue 12) pp:1769-1774
Publication Date(Web):31 July 2006
DOI:10.1016/j.tetasy.2006.05.019
A broad range of prochiral ketones were efficiently reduced to the corresponding optically active secondary alcohols using resting cells of Rhodotorula sp. AS2.2241. The microbial reduction system exhibited high activity and enantioselectivity in the reduction of various aromatic ketones and acetylpyridines (>97% ee), but moderate to high enantioselectivity in the reduction of α- and β-keto esters. (R)-Nifenalol, a β-adrenergic blocker, was also synthesized using 2-bromo-1(R)-(4-nitrophenyl)ethanol (97% ee) which was prepared through the asymmetric reduction of 2-bromo-1-(4-nitrophenyl)ethanone employing Rhodotorula sp. AS2.2241. The simple preparation and the high activity of the biocatalyst turned this system into a versatile tool for organic synthesis.(S)-(−)-1-PhenylethanolC8H10OEe = 99%[α]D = −59.2 (c 0.658, CHCl3)Absolute configuration: (S)(S)-(−)-1-(4-Nitrophenyl)ethanolC8H9NO3Ee = >99%[α]D = −30.5 (c 1.083, EtOH)Absolute configuration: (S)(S)-(−)-1-(4-Bromophenyl)ethanolC8H9BrOEe = >99%[α]D = −36.0 (c 0.775, CHCl3)Absolute configuration: (S)(S)-(−)-1-(4-Chlorophenyl)ethanolC8H9ClOEe = >99%[α]D = −47.8 (c 0.758, Et2O)Absolute configuration: (S)(S)-(−)-1-(4-Methoxyphenyl)ethanolC9H12O2Ee = >99%[α]D = −56.4 (c 0.442, CHCl3)Absolute configuration: (S)(R)-(−)-2-Bromo-1-phenylethanolC8H9BrOEe = >99%[α]D = −39.5 (c 0.592, CHCl3)Absolute configuration: (R)(R)-(−)-2-Chloro-1-phenylethanolC8H9ClOEe = >99%[α]D = −50.7 (c 0.225, cyclohexane)Absolute configuration: (R)(S)-(−)-Phenyl-1-propanolC9H12OEe = >99%[α]D = −50.8 (c 1.03, CHCl3)Absolute configuration: (S)(R)-(−)-2-Bromo-1-(4-nitrophenyl)ethanolC8H8BrNO3Ee = 97%[α]D = −35.4 (c 0.942, CHCl3)Absolute configuration: (R)(R)-(−)-2-Isopropylamino-1-(4-nitrophenyl)ethanolC11H16N2O3Ee = 97%[α]D = −41.5 (c 0.286, H2O)Absolute configuration: (R)(S)-(−)-2-Pyridyl-1-ethanolC7H9NOEe = >99%[α]D = −25.0 (c 1.39, CHCl3)Absolute configuration: (S)(S)-(−)-3-Pyridyl-1-ethanolC7H9NOEe = 99%[α]D = −47.0 (c 0.625, MeOH)Absolute configuration: (S)(S)-(−)-4-Pyridyl-1-ethanolC7H9NOEe = 97%[α]D = −44.0 (c 1.03, MeOH)Absolute configuration: (S)(R)-(−)-Methyl mandelateC9H10O3Ee = 86%[α]D = −124.8 (c 0.8, MeOH)Absolute configuration: (R)(S)-(−)-3-Hydroxy-3-phenylpropionic acid ethylesterC11H14O3Ee = >99%[α]D = −52.7 (c 1.0, CHCl3)Absolute configuration: (S)(S)-(+)-Ethyl 3-hydroxybutyrateC6H12O3Ee = 74%[α]D = +22.2 (c 0.442, CHCl3)Absolute configuration: (S)(S)-(−)-Ethyl 4-chloro-3-hydroxybutanoateC6H11ClO3Ee = 64%[α]D = −11.4 (c 1.59, CHCl3)Absolute configuration: (S)
Co-reporter:Ai Min Tong, Wen Ya Lu, Jian He Xu, Guo Qiang Lin
Bioorganic & Medicinal Chemistry Letters 2004 Volume 14(Issue 9) pp:2095-2097
Publication Date(Web):3 May 2004
DOI:10.1016/j.bmcl.2004.02.042
A facile method for enzymatic glycosylation of 4-substituted benzyl alcohols and tyrosol with glucose in a monophasic aqueous-dioxane medium was reported, using a crude meal of apple seed as a new catalyst. The corresponding β-d-glucosides were synthesized in moderate yields (13.1–23.1%), among which the salidroside was obtained in 15.8% yield.A facile method for enzymatic glycosylation of 4-substituted benzyl alcohols and tyrosol with glucose in a monophasic aqueous-dioxane medium was reported, using a crude meal of apple seed as a new catalyst. The corresponding β-d-glucosides were synthesized in moderate yields (13.1–23.1%), among which the salidroside was obtained in 15.8% yield.
Co-reporter:Min Li, Zheng Zhou, Zhi-Jun Zhang, Hui-Lei Yu, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (September 2016) Volume 131() pp:47-54
Publication Date(Web):1 September 2016
DOI:10.1016/j.molcatb.2016.06.001
•A new nitrile reductase with a specific activity three times of the highest value was cloned from Pectobacterium carotovorum.•The enzyme was stable and highly active over a wide range of temperatures.•Homology modeling and docking analysis were performed to explain its higher catalytic activity.Nitrile reductase is a newly discovered enzyme class that can catalyze the reduction of nitriles directly to amines, a very important reaction in synthetic organic chemistry. However, little progress has been made towards the application of this biocatalysis reaction for organic synthesis since the initial discovery of nitrile reductase for over ten years. One of the potential reasons may be due to the lack of structural information and biochemical properties, in addition to its inherent narrow substrate scope. Meanwhile, the highly conserved active site residues make it a great challenge to widen the substrate spectrum of nitrile reductase by means of protein engineering approaches. To explore more nitrile reductases with different characteristics (e.g. specific activity, thermostability, etc) for potential synthetic applications, a new nitrile reductase, designated as PcNRed, was discovered from the genome of Pectobacterium carotovorum, with a moderate specific activity of 366 U/g protein towards its natural substrate, preQ0. The PcNRed was subsequently overexpressed in Escherichia coli BL21 (DE3), purified to homogeneity and then its biochemical properties were examined. The optimal reaction temperature and pH were determined to be 40 °C and 7.4, respectively. The thermal deactivation process of PcNRed obeys first-order kinetics, with half-lives of 47.2, 13.6 and 3.9 h measured at 30, 40, and 50 °C, respectively. The kinetic constants were also determined with respect to both of the substrates NADPH and preQ0, giving kcat of 0.025 s−1 and 0.024 s−1, and KM of 0.229 mM and <0.25 μM. To shed some light on the structural information of PcNRed, a homology model was built and compared with its counterparts, which is helpful for further engineering of this novel but less-elucidated enzymes.Download full-size image
Co-reporter:Suxia Li, Huaiyu Pang, Kang Lin, Jianhe Xu, Jian Zhao, Liqiang Fan
Journal of Molecular Catalysis B: Enzymatic (September 2011) Volume 71(Issues 3–4) pp:171-176
Publication Date(Web):1 September 2011
DOI:10.1016/j.molcatb.2011.04.016
Expression of recombinant proteins as inclusion bodies in bacteria is one of the most efficient ways to produce cloned proteins, as long as the inclusion bodies can be successfully refolded. In this study, the different parameters were investigated and optimized on the refolding of denatured lipase. The maximum lipase activity of 5000 U/L was obtained after incubation of denatured enzyme in a refolding buffer containing 20 mM Tris–HCl (pH 7.0), 1 mM Ca2+ at 20 °C. Then, the refolded lipase was purified to homogeneity by anion exchange chromatography. The purified refolded lipase was stable in broad ranges of temperatures and pH values, as well as in a series of water-miscible organic solvents. In addition, some water-immiscible organic solvents, such as petroleum ether and isopropyl ether, could reduce the polarity and increase the nonpolarity of the refolding system. The results of Fourier transform infrared (FT-IR) microspectroscopy were the first to confirm that lipase refolding could be further improved in the presence of organic solvents. The purified refolded lipase could enantioselectively hydrolyze trans-3-(4-methoxyphenyl) glycidic acid methyl ester [(±)-MPGM]. These features render the lipase attraction for biotechnological applications in the field of organic synthesis and pharmaceutical industry.Graphical abstractDownload full-size imageHighlights► Ca2+ activates the lipase activity in refolding buffer. ► Organic solvents assist the correct conformational transformation of the lipase. ► Water-immiscible organic solvents further improve the refolding of the lipase.
Co-reporter:Lei Chang, Li-Ming Ouyang, Yi Xu, Jiang Pan, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (September 2010) Volume 66(Issues 1–2) pp:95-100
Publication Date(Web):1 September 2010
DOI:10.1016/j.molcatb.2010.03.011
A bacterial strain (No. ECU0015), which catalyzes the hydrolysis of phenyl-1,2-ethanediol cyclic carbonates (4-phenyl-1,3-dioxolan-2-one, 1) to (S)-1-phenyl-1,2-ethanediol (2) with high enantioselectivity, was newly isolated from soil samples utilizing the cyclic carbonate as sole carbon and energy source. The bacterium was later identified as Bacillus species by its 16S rDNA sequence and phylogenetic analysis. The optimal reaction temperature and pH for the asymmetric hydrolysis of 1 using whole cells were 35 °C and pH 7.3, respectively. Partial bio-oxidation of the produced (R)-diol was observed, resulting in an increase in the eep (enantiomeric excess of product) of the main product (S)-diol. Under the improved reaction condition, the target product (S)-diol was prepared in gram scale, affording an excellent eep (>99%) with a moderate yield (27.8%) as compared to the maximum theoretical yield of 50% for kinetic resolution. This strain of Bacillus sp. also displayed fairly good activity and enantioselectivity towards some other compounds tested, such as 2-acetoxy-2-phenylacetic acid (3) and its derivatives.
Co-reporter:Xu-Yun Liu, Fei-Fei Chen, Chun-Xiu Li, Xiao-Jing Luo, Qi Chen, Yun-Peng Bai, Jian-He Xu
Enzyme and Microbial Technology (November 2016) Volumes 93–94() pp:11-17
Publication Date(Web):1 November 2016
DOI:10.1016/j.enzmictec.2016.07.005
•An efficient methyl parathion hydrolase was cloned and heterologously expressed.•This hydrolase with a minor sequence-difference exhibited a much higher activity.•Engineering the enzyme based on consensus approach further enhanced its activity.•The enhanced polar contacts of T64N is assumed to account for the improved activity.A methyl parathion hydrolase (MPH) gene, bjmpd, was cloned from a newly isolated MP-degrading bacterial strain, Burkholderia jiangsuensis MP-1T and heterologously expressed in Escherichia coli BL21 (DE3). Although the amino acid sequence of the bjmpd-encoded enzyme, named BjMPH, differed from that of MPH from Pseudomonas sp. WBC-3 (PsMPH) in only three residues, Ser132, Val247 and Ala267, a significantly higher specific activity towards MP was exhibited by BjMPH than PsMPH. Among them, Ala267 was identified as a key site affecting the catalytic efficiency, and it was rather conservative (Ala or Ser) in homologous proteins, suggesting that a simple substitution of the residue in conservative site with another conservative residue based on the consensus sequence approach might possibly enhance the catalytic efficiency of the MP-degrading enzyme. Inspired by such an observation, we identified a new mutant, BjMPHT64N, exhibiting 3.78-fold higher catalytic efficiency (kcat/KM) towards MP than its wild-type, reaching 4.20 × 106 M−1 s−1. The mutant BjMPHT64N also displayed enhanced reactivities (kcat/KM) towards other organophosphorus pesticides. Homology-modelling analysis indicates that enhanced polar contacts of the 64th residue in this mutant may contribute to stabilizing the structure of the enzyme and promote the interactions between enzyme and substrate. This study generated an efficient MP-degrading enzyme, and provides useful information for enhancing the catalytic efficiency of MPHs via conservative residue substitution based on the consensus approach.
Co-reporter:Yi Gong, Guo-Chao Xu, Gao-Wei Zheng, Chun-Xiu Li, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (November 2014) Volume 109() pp:1-8
Publication Date(Web):1 November 2014
DOI:10.1016/j.molcatb.2014.07.014
•Thermostability of BSE was successfully enhanced by random mutagenesis.•Increased T5015 value and optimum temperature of up to 4.5 and 5.0 °C.•The total turn-over number of BSEV4 was 1.1–1.5 folds higher with 1.0 M of substrate loading for each batch.•Increased ionic bonds, hydrogen bonds and hydrophobic interactions contribute to stabilize the protein.Bacillus subtilis esterase (BSE) exhibits high activity, extraordinary substrate/product tolerance and excellent enantioselectivity in the production of l-menthol through enantioselective hydrolysis of dl-menthyl acetate. However, rapid inactivation of wild-type BSE at elevated temperatures often hampers its applications. In this work, directed evolution was used to create thermostable mutants of BSE. After screening and recombination of beneficial mutations, BSEV4 was chose for the best mutant. The BSEV4 had half-lives of 462, 248 and 0.34 h at 30, 40 and 50 °C, respectively, which were 5.6, 4.1 and 2.0 folds longer than those of BSEWT. Moreover, BSEV4 showed an increase of 4.5 °C in T5015 and a higher temperature optimum compared with the wild-type enzyme. In the kinetic resolution of dl-menthyl acetate at 1.0 M substrate loading, BSEV4 displayed improvements in operational stability than BSEWT, leading to a 1.5-fold higher total turnover number at 45 °C. The model structure of BSEV4 with four mutations, built with a highly homologous p-nitrobenzyl esterase (PDB ID: 1QE3) as the template, revealed that the newly formed hydrogen bonds and ionic bonds were beneficial for enhancing the thermostability of BSE.The thermostability of an esterase from Bacillus subtilis was enhanced by random mutagenesis and combination of beneficial mutations. The hydrolysis of racemic menthyl acetate by BSEV4 at elevated temperature indicates that better thermostability could reduce the enzyme dosage or reaction time. The modeled structure demonstrates the addition of ionic bonds, hydrogen bonds and/or hydrophobic interactions will contribute mostly to the structure stability.Download full-size image
Co-reporter:Jia-Yan Liu, Gao-Wei Zheng, Chun-Xiu Li, Hui-Lei Yu, Jiang Pan, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (May 2013) Volume 89() pp:41-47
Publication Date(Web):1 May 2013
DOI:10.1016/j.molcatb.2012.12.008
In order to describe the functional characteristics of new esterases by evaluating their capacity of releasing alcohols from the corresponding esters, and to build “visiting cards” which might guide more widespread application in other reactions, an array of 20 acetates of structurally diverse alcohols were designed and synthesized for rapidly fingerprinting the activities of newly discovered lipases or esterases. At first, two well-known commercial lipases/esterases, Candida rugosa lipase (CRL) and pig liver esterase (PLE), were employed as models to verify the feasibility of this method. Subsequently, four home-made new enzymes were tested to compare their substrate fingerprints. Three parameters were adopted for quantitative characterization of the fingerprints of enzymes. Among them, the Shannon–Wiener index was adopted for the first time to quantitatively describe the breadth of substrate spectrum, making it easy and comprehensive to evaluate the breadth of substrate spectrum of homologous enzymes.Graphical abstractShannon–Wiener index was adopted for the first time to quantitatively evaluate the breadth of substrate spectrum of newly discovered lipases or esterases, using an array of 20 acetates of structurally diverse alcohols.Download full-size imageHighlights► An array of 20 acetates of structurally diverse alcohols was designed and synthesized for rapidly fingerprinting the activities. ► Different preference of esterase and lipase to acyl groups were compared. Different acyl groups for fingerprinting the activities of esterase and lipase were recommended. ► The Shannon–Wiener index was adopted for the first time to describe the breadth of substrate spectrum of enzymes in a quantitative mode.
Co-reporter:Jin-Huan Su, Jian-He Xu, Hui-Lei Yu, Yu-Cai He, Wen-Ya Lu, Guo-Qiang Lin
Journal of Molecular Catalysis B: Enzymatic (May 2009) Volume 57(Issues 1–4) pp:278-283
Publication Date(Web):1 May 2009
DOI:10.1016/j.molcatb.2008.09.017
A novel β-glucosidase from Fusarium proliferatum ECU2042 (FPG) was successfully purified to homogeneity with a 506-fold increase in specific activity. The molecular mass of the native purified enzyme (FPG) was estimated to be approximately 78.7 kDa, with two homogeneous subunits of 39.1 kDa, and the pI of this enzyme was 4.4, as measured by two-dimensional electrophoresis. The optimal activities of FPG occurred at pH 5.0 and 50 °C, respectively. The enzyme was stable at pH 4.0–6.5 and temperatures below 60 °C, and the deactivation energy (Ed) for FPG was 88.6 kJ mo1−1. Moreover, it was interesting to find that although the purified enzyme exhibited a very low activity towards p-nitrophenyl β-d-glucoside (pNPG), and almost no activity towards cellobiose, a relatively high activity was observed on ginsenoside Rg3. The enzyme hydrolyzed the 3-C, β-(1 → 2)-glucoside of ginsenoside Rg3 to produce ginsenoside Rh2, but did not sequentially hydrolyze the β-d-glucosidic bond of Rh2. The Km and Vmax values of FPG for ginsenoside Rg3 were 2.37 mM and 0.568 μmol (h mg protein)−1, respectively. In addition, this enzyme also exhibited significant activities towards various alkyl glucosides, aryl glucosides and several natural glycosides.
Co-reporter:Jiang Pan, Xu-Dong Kong, Chun-Xiu Li, Qin Ye, Jian-He Xu, Tadayuki Imanaka
Journal of Molecular Catalysis B: Enzymatic (March 2011) Volume 68(Issues 3–4) pp:256-261
Publication Date(Web):1 March 2011
DOI:10.1016/j.molcatb.2010.11.014
Crosslinking of enzyme aggregates is a promising method for enzyme immobilization. In this work, crosslinked enzyme coaggregates of Serratia marcescens lipase with polyethyleneimine (CLECAs-SML-PEI) were prepared using polyethyleneimine (PEI) as coprecipitant and glutaraldehyde as crosslinking reagent. The crude lipase solution at a low protein concentration (0.1 mg/ml), with PEI at a mass ratio of 3:1 (PEI/protein, w/w), was found to be most adequate for the coprecipitation of SML. After crosslinking of the coaggregate of SML-PEI with 0.2% (w/v) glutaraldehyde under ambient temperature, over 70% of the total lipase activity was recovered. Compared with the free SML, the optimum temperature of the CLECAs-SML-PEI was enhanced from 50 °C to 60 °C and its thermal stability was also significantly improved. CLECAs-SML-PEI showed excellent operational stability in repeated use in aqueous–toluene biphasic system for asymmetric hydrolysis of trans-3-(4′-methoxyphenyl)glycidic acid methyl ester (MPGM), without significant inactivation after 10 rounds of repeated use.Graphical abstractDownload full-size imageResearch highlights▶ A stable biocatalyst of S. marcescens lipase was prepared by the method of CLECAs. ▶ Polyethyleneimine was used as sole precipitating agent in the preparation of CLECAs. ▶ CLECAs-SML-PEI showed no significant inactivation after 10 rounds of repeated use.
Co-reporter:Zheng-Jiao Luan, Yue-Cai Yin, Ai-Tao Li, Hui-Lei Yu, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (June 2015) Volume 116() pp:78-82
Publication Date(Web):1 June 2015
DOI:10.1016/j.molcatb.2015.02.006
•The reductase domain of P450SMO can be used as the electron donor partner for Class I P450.•The linker (G4S)4 exhibiting high flexibility showed high catalytic activity.•The fusion enzyme could catalyze the hydroxylation of (−)-limonene, α-pinene as well as camphor.•Co-expression of GDH with the artificial P450 can supply enough NADPH for the hydroxylation.Cytochrome P450SMO from Rhodococcus sp. ECU0066 is a natural self-sufficient P450 monooxygenase, consisting of a heme domain, a flavin-reductase domain containing FMN and NADPH binding sites, and a [Fe2S2] ferredoxin domain. P450cam catalyzes the hydroxylation of camphor to 5-exo-hydroxycamphor. The variant P450cam (Y96F/V247L) was reported for the oxidation of monoterpene by protein engineering. In this work, we constructed an artificial self-sufficient P450-type monoterpene hydroxylase by connecting the P450SMO reductase domain and the P450cam (Y96F/V247L) domain together with a linker region (G4S)4. The resultant chimeric P450 enzyme could catalyze the hydroxylation of (−)-limonene and α-pinene as well as camphor, which were all inactive for the natural fusion protein P450SMO. Co-expression of the fused P450 with a glucose dehydrogenase (GDH) improved the (−)-limonene conversion as sufficient NADPH was regenerated in the system with glucose as a cosubstrate. This work illustrated that P450SMO reductase might act as an electron donor partner of P450s and might be used for fusion with heterogeneous P450 domains to elucidate the catalytic function of other unknown P450s.We constructed an artificial self-sufficient P450-type monoterpene hydroxylase by connecting the P450SMO reductase domain and the P450cam (Y96F/V247L) domain together with a linker region (G4S)4. The resultant chimeric P450 enzyme could catalyze the hydroxylation of (−)-limonene and α-pinene as well as camphor, which were all inactive for the natural fusion protein P450SMO. Co-expression of the fused P450 with a glucose dehydrogenase (GDH) improved the (−)-limonene conversion as sufficient NADPH was regenerated in the system with glucose as a cosubstrate. This work illustrated that P450SMO reductase can act well as an electron donor partner of P450s and may be used for fusion with heterogeneous P450 domains to elucidate the catalytic function of other unknown P450s.Download full-size image
Co-reporter:Yan-Peng Xu, Yue Hugh Guan, Hui-Lei Yu, Yan Ni, Bao-Di Ma, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (June 2014) Volume 104() pp:108-114
Publication Date(Web):1 June 2014
DOI:10.1016/j.molcatb.2014.03.006
•The inactivation mechanism of reductase YtbE was studied and elucidated.•We proposed a systematic strategy for improving the stability of YtbE.•The CBFM bioreduction was successfully improved for manufacturing methyl (R)-o-chloromandelate.Asymmetric reduction of methyl o-chlorobenzoylformate (CBFM) using aldo-keto reductase YtbE is a potentially cost-effective and green technology in manufacturing methyl (R)-o-chloromandelate which is a key intermediate for synthesizing (S)-clopidogrel (a popular medicine for treating atherosclerosis). At the moment, large scale application of YtbE has been complicated by uncertain thermal and operational stabilities. Consequently, we endeavored possible enzyme inactivation mechanism, and showed that (a) unfolding of YtbE explains enzyme activity loss, and (b) YtbE dimerization has a less significant effect owing to a small quantity detected. The effects of substrate and temperature on YtbE are mostly upheld by a one-step inactivation model, whereas the effect of product by a 2-step activity reduction modality. Partially based on these new understandings, a multi-factor experimental strategy was rationalized for improving the YtbE stability. For instance, glycerol was introduced to reduce enzyme unfolding whilst dithiothreitol to suppress its dimerization. This improved substrate conversion from 62.9% to 98.7%, and from 70.5% to 96.6% at 0.1 M and 1.0 M CBFM, respectively, with YtbE half-life being increased from 46.6 min to 159 min.Download full-size image
Co-reporter:Yun-Long Li, Jian-He Xu, Yi Xu
Journal of Molecular Catalysis B: Enzymatic (June 2010) Volume 64(Issues 1–2) pp:48-52
Publication Date(Web):1 June 2010
DOI:10.1016/j.molcatb.2010.01.031
Deracemization of racemic 1-phenylethanol, i.e., stereoinversion of (R)-1-phenylethanol to (S)-1-phenylethanol, has been successfully realized via concurrent enantioselective oxidation and stereoselective reduction employing whole-cell biocatalysts of an alcohol dehydrogenase and a ketone reductase with opposite stereoselectivity in one-pot. One biocatalyst is Microbacterium oxydans ECU2010 which catalyzes stereoselective oxidation of (R)-secondary alcohols to corresponding ketones and another is Rhodotorula sp. AS2.2241 which reduces the ketones to (S)-secondary alcohols. Each of the whole-cell biocatalysts has its own in vivo cofactor regeneration system so that there is no need to add the expensive cofactor and/or the oxidoreductase for the cofactor regeneration. To explore the generality of this method, a broad range of racemic aryl secondary alcohols were efficiently deracemized to their (S)-enantiomers by combination of the two microorganisms, affording optically pure secondary alcohols in high yields (86.5–99%) and excellent optical purity (>99% ee). Our method represents an easy going, cheap and environmentally benign way for the biocatalytic synthesis of chiral aryl secondary alcohols from their racemates.
Co-reporter:Jing Li, Jiang Pan, Jie Zhang, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (July 2014) Volume 105() pp:11-17
Publication Date(Web):1 July 2014
DOI:10.1016/j.molcatb.2014.03.010
•An EsLeuDH with relatively high activity and thermal stability was discovered.•The EsLeuDH was coexpressed with BmGDH to avoid the usage of external cofactor.•Enantiopure l-tert-leucine was obtained at a yield of 80% in a 1-L reaction system.•The space-time-yield reached 944.7 g L−1 d−1, higher than the results reported.A leucine dehydrogenase from Exiguobacterium sibiricum (EsLeuDH) was discovered by genome mining approach. The EsLeuDH was overexpressed in Escherichia coli BL21, purified to homogeneity and characterized. This enzyme showed good thermostability with a half-life of 3.1 h at 60 °C. Furthermore, EsLeuDH has a broad spectrum of substrate specificity, showing activities toward many aliphatic α-keto acids and L-amino acids, in addition to some aryl α-keto acids and aryl α-amino acids, such as α-oxobenzeneacetic and l-phenylglycine. The EsLeuDH was successfully coexpressed with Bacillus megaterium glucose dehydrogenase (BmGDH) in Escherichia coli BL21 for the production of l-tert-leucine. By using the coexpressed whole cells, a decagram preparation of l-tert-leucine was performed at a substrate concentration of 0.6 M (78.1 g L−1) in 1 L scale with 99% conversion after 5.5 h, resulting in 80.1% yield and > 99% ee (enantiomeric excess).Download full-size image
Co-reporter:Gao-Wei Zheng, Hui-Lei Yu, Chun-Xiu Li, Jiang Pan, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (July 2011) Volume 70(Issues 3–4) pp:138-143
Publication Date(Web):1 July 2011
DOI:10.1016/j.molcatb.2011.02.018
A recombinant esterase (EC 3.1.1.1) cloned from Bacillus subtilis 0554 (BSE) was carrier-freely immobilized with the method of cross-linked enzyme aggregates. The conditions for preparing the cross-linked aggregates of BSE (CLA-BSE) were optimized, including the type and concentration of precipitants, and the concentration of cross-linker, and a simple and efficient procedure for preparing CLA-BSE was developed, consisting of a precipitation step with 0.5 g mL−1 (NH4)2SO4 and a cross-linking step with 60 mM glutaraldehyde for a period of 3 h as the cross-linking time. As a result, about 70% of the initial free BSE activity was incorporated into the CLA-BSE. The thermal stabilities of the immobilized enzyme at 30 °C and 50 °C were >360 and 14 times those of free BSE, respectively. More importantly, the operational stability of CLA-BSE was also considerably improved. In the kinetic resolution of dl-menthyl acetate to produce l-menthol with CLA-BSE gave eep > 94% at conversion of >40% and the CLA-BSE could be reused for 10 times with only about 8% reduction in activity. Therefore, the new biocatalyst immobilized through the methodology of CLEAs could significantly decrease the manufacturing cost of l-menthol and would be more beneficial for its practical applications.Graphical abstractDownload full-size imageHighlights► A Bacillus subtilis esterase was immobilized by simple method. ► Thermal stability of immobilized esterase was significantly improved. ► Immobilized esterase was reused for 10 times with only about 8% reduction in activity. ► Immobilized enzyme exhibited high enantioselectivity and conversion.
Co-reporter:Wei-Jia Zhou, Yan Ni, Gao-Wei Zheng, Huan-Hui Chen, Zhi-Rong Zhu, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (January 2014) Volume 99() pp:102-107
Publication Date(Web):1 January 2014
DOI:10.1016/j.molcatb.2013.11.005
•A novel process was developed to produce a key precursor for (R)-α-lipoic acid.•Increase E value by designing the reacted site (OH group) on the chiral center.•Redesigned and optimized the producing process.•Succeeded in repetitive use of catalyst for producing the target products.A new and efficient process was developed by lipase-catalyzed transacylation to resolve ethyl 8-chloro-6-hydroxy octanoate (ECHO) to produce an important chiral precursor for the synthesis of (R)-α-lipoic acid. After optimization of biocatalyst, solvent, acyl donor, temperature and enzyme loading, (S)-O-acetylated ECHO was achieved in 94% ee, 35% isolated yield and 38 g L−1 d−1 space-time yield using Novozym 435 as biocatalyst. Subsequently, the enzymatic resolution reaction was successfully repeated for 7 batches, retaining over 40% conversions.A new and efficient process was developed by lipase-catalyzed transacylation to resolve ethyl 8-chloro-6-hydroxy octanoate (ECHO) to produce an important chiral precursor for the synthesis of (R)-α-lipoic acid.Download full-size image
Co-reporter:Xu-Dong Kong, Hui-Lei Yu, Sheng Yang, Jiahai Zhou, Bu-Bing Zeng, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (December 2015) Volume 122() pp:275-281
Publication Date(Web):1 December 2015
DOI:10.1016/j.molcatb.2015.10.005
α-Naphthyl glycidyl ether of 100 g/L was resolved with an engineered epoxide hydrolase.An optimized biphasic system facilitates the separation of chiral diol in higher enantiopurity.TTN of the enzyme reached 70,000 affording high space-time yields of the products.Simultaneous synthesis of the R- and S-enantiomers of biologically active propranolol, a typical β-blocker, was achieved in high optical purity via an epoxide hydrolase-catalyzed resolution of racemic α-naphthyl glycidyl ether (rac-1). A preparative resolution of 100 g/L rac-1 was accomplished with high enantioselectivity (E = 92) using a variant of Bacillus megaterium epoxide hydrolase (BmEHF128T). A biphasic system (isopropyl ether/isooctane/aqueous) was used, in which the product 3-(1⿲-naphthyloxy)-propane-1,2-diol (2) precipitated instantly, facilitating its separation and increasing the enantiopurity of (R)-2 (>99.5% ee). This enzymatic resolution had a total turnover number of 70,000, affording enantiopure epoxide (S)-1 (>99% ee) and 1,2-diol (R)-2 (>99% ee) in 45.3% and 42.4% yields, respectively. (R)-2 and (S)-1 were subsequently converted to (R)- and (S)-propranolol (3) (>99% ee) in overall yields of 31.4% and 44.8%. To the best of our knowledge, this is the best case for enzymatic resolution of rac-1 using an epoxide hydrolase, giving high space-time yields [136 g L1 days1 for (S)-1 and 139 g L1 days1 for (R)-2] under mild reaction conditions. It provides a new and eco-friendly route that complements other methods using organometallic catalysts.Download high-res image (180KB)Download full-size image
Co-reporter:Xin Tian, Gao-Wei Zheng, Chun-Xiu Li, Zhi-Long Wang, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (December 2011) Volume 73(Issues 1–4) pp:80-84
Publication Date(Web):1 December 2011
DOI:10.1016/j.molcatb.2011.07.022
The whole cells of recombinant Escherichia coli BL21 overexpressing a Bacillus subtilis esterase (BsE) were utilized to sequentially hydrolyze the dicarboxyester of 1-phenyl-1,2-ethanediol for production of (S)-1-phenyl-1,2-ethanediol (PED), exhibiting high hydrolytic activity, excellent regio- and enantioselectivities towards the dicarboxyester of PED. Among the dicarboxyesters with different acyl chains (e.g., acetyl, n-butyl, and n-hexyl), the best enantioselectivity (E = 176) was observed when PED diacetate was employed as the initial substrate. Various reaction conditions were systematically investigated for enantioselective hydrolysis of PED diacetate. Under the optimal reaction conditions, kinetic resolution of 100 mM PED diacetate resulted in 49% conversion within 1 h, affording (S)-PED in 96% ee. A 150-ml scale reaction was performed, affording (S)-PED in 49% yield and 95% ee. After recrystallization in chloroform, the optical purity of (S)-PED was improved up to >99% ee, with a total yield of 45%. These results imply that this recombinant esterase (BsE) is a potentially promising biocatalyst for bioproduction of (S)-PED, an important chiral building block with wide application in pharmaceutical industry and liquid-crystal display materials.Graphical abstractDownload full-size imageHighlights► A recombinant Bacillus subtilis esterase was producted (S)-1-phenyl-1,2-ethanediol. ► The BsE exhibited the best enantioselectivity (E = 176) towards diacetate of PED. ► The hydrolysis reaction gave a 49% conversion within 1 h, and (S)-PED in 96% ee. ► The BsE is a potentially promising biocatalyst for bioproduction of (S)-PED.
Co-reporter:Le Qian, Jia-Yan Liu, Jia-Ying Liu, Hui-Lei Yu, Chun-Xiu Li, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (December 2011) Volume 73(Issues 1–4) pp:22-26
Publication Date(Web):1 December 2011
DOI:10.1016/j.molcatb.2011.07.010
A series of structurally diverse chromogenic esters, including a new compound (4-nitrophenyl 2-methylpentanoate), has been synthesized, constituting an array of 17 substrates which could be applied to rapidly fingerprint the activity of lipases or esterases to reveal their substrates specificity and functional characteristics. Combined with genetic technology such as “data mining” and directed evolution, such fingerprints might be a promising platform for discovery of potentially useful enzymes in industrial application. The fingerprint of commercially available Lipase-B from Candida antarctica as a model enzyme was first measured to confirm the reliability of this method. Then three new enzymes mined from genomic libraries were successfully fingerprinted, revealing the functional characteristics of those enzymes. Among them, the enzyme SrfAD was founded with specific substrate preference towards cycloalkyl carboxylic esters and aromatic esters, making it more promising in synthetic utilities than other tested enzymes.Graphical abstractDownload full-size imageHighlights► A series of structurally diverse chromogenic esters including a new compound has been synthesized. ► This substrate array was applied to rapidly fingerprint the activity of lipases or esterases. ► Three enzymes mined from genomic libraries were successfully fingerprinted. ► The enzyme SrfAD was founded with specific substrate preference.
Co-reporter:Gao-Wei Zheng, Jian-He Xu
Current Opinion in Biotechnology (December 2011) Volume 22(Issue 6) pp:784-792
Publication Date(Web):1 December 2011
DOI:10.1016/j.copbio.2011.07.002
Various biocatalytic methods have been developed for the synthesis of chiral chemicals, which have made their synthesis more environmentally friendly and product-specific. New opportunities for biocatalysis, including new scientific developments in genomics and protein engineering technologies, novel process developments and the increased availability of useful enzymes, offer many possibilities for the manufacture of new chiral compounds and deliver greener and economically competitive processes. In this review, new opportunities for biocatalysis in the preparation of chiral molecules are outlined and highlighted.Highlights► Recent examples improving the processes performance of existing reactions were highlighted in this review. ► Some recent new synthetic routes for the synthesis of chiral chemicals were outlined in this review. ► Some recent important and interesting enzymes for the synthesis of chiral chemicals were focused on in this review.
Co-reporter:Hong Zhu, Jiang Pan, Bin Hu, Hui-Lei Yu, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (December 2009) Volume 61(Issues 3–4) pp:174-179
Publication Date(Web):1 December 2009
DOI:10.1016/j.molcatb.2009.06.007
Glycolate oxidase was isolated from Medicago falcata Linn. after a screening from 13 kinds of C3 plant leaves, with higher specific activity than the enzyme from spinach. The M. falcata glycolate oxidase (MFGO) was partially purified and then immobilized onto hydrothermally synthesized magnetic nanoparticles via physical adsorption. The magnetic nanoparticles were characterized with scanning electron microscope (SEM), transmission electron microscopy (TEM) and Fourier transform infrared (FT-IR) spectroscopy. The maximum load of MFGO was 56 mg/g support and the activity recovery was 45%. Immobilization of MFGO onto magnetic nanoparticles enhanced the enzyme stability, and the optimum temperature was significantly increased from 15 °C to 30 °C. The immobilized biocatalyst was successfully used in a batch reactor for repeated oxidization of glycolic acid to synthesize glyoxylic acid, retaining ca. 70% of its initial activity after 4 cycles of reaction at 30 °C for nearly 70 h, and its half-life was calculated to be 117 h.
Co-reporter:Yan Ni, Hui-Lei Yu, Guo-Qiang Lin, Jian-He Xu
Enzyme and Microbial Technology (5 March 2014) Volume 56() pp:40-45
Publication Date(Web):5 March 2014
DOI:10.1016/j.enzmictec.2013.12.016
•A new ene reductase (ClER) from Clavispora lusitaniae is presented.•ClER was active toward a diverse range of activated alkenes.•As much as 500 mM ketoisophorone was reduced to (R)-levodione with 98% ee.A putative ene reductase gene from Clavispora lusitaniae was heterologously overexpressed in Escherichia coli, and the encoded protein (ClER) was purified and characterized for its biocatalytic properties. This NADPH-dependent flavoprotein was identified with reduction activities toward a diverse range of activated alkenes including conjugated enones, enals, maleimide derivative and α,β-unsaturated carboxylic esters. The purified ClER exhibited a relatively high activity of 7.3 U mgprot−1 for ketoisophorone while a remarkable catalytic efficiency (kcat/Km = 810 s−1 mM−1) was obtained for 2-methyl-cinnamaldehyde due to the high affinity. A series of prochiral activated alkenes were stereoselectively reduced by ClER furnishing the corresponding saturated products in up to 99% ee. The practical applicability of ClER was further evaluated for the production of (R)-levodione, a valuable chiral compound, from ketoisophorone. Using the crude enzyme of ClER and glucose dehydrogenase (GDH), 500 mM of ketoisophorone was efficiently converted to (R)-levodione with excellent stereoselectivity (98% ee) within 1 h. All these positive features demonstrate a high synthetic potential of ClER in the asymmetric reduction of activated alkenes.
Co-reporter:Hui-Lei Yu, Jian-He Xu, Wen-Ya Lu, Guo-Qiang Lin
Journal of Biotechnology (29 February 2008) Volume 133(Issue 4) pp:469-477
Publication Date(Web):29 February 2008
DOI:10.1016/j.jbiotec.2007.12.003
Salidroside is a natural glycoside with pharmacological activities of resisting anoxia, microwave radiation and fatigue, improving oxygen lack, and postponing ageing. In this work, salidroside and other natural glucosides such as cinnamyl O-β-d-glucopyranoside and 4-methoxybenzyl O-β-d-glucopyranoside were efficiently synthesized via an environmentally benign and energy economic process. In the synthetic process, apple seed, easily available from discards of fruit processing factories, was employed as a natural and green catalyst. Moreover, all of the catalyst, solvent and excessive substrate was reused or recycled. The biocatalytic reaction was carried out in a clean and less toxic medium of aqueous tert-butanol and the glucoside produced was selectively removed from reaction mixture by alumina column adsorption, making excessive substrate (aglycon) recyclable for a repeated use in the next batch of reaction. For improvement of the biocatalyst stability, apple seed meal was further cross-linked by glutaraldehyde, yielding a net-like porous structure within which the dissociating proteins were immobilized, resulting in improved permeability of the biocatalyst. After the simple cross-linking treatment, the half-life of apple seed catalyst was significantly improved from 29 days to 51 days. The productivity of the bioreactor in the case of salidroside can reach ca. 1.9 g l−1 d−1, affording the product in up to 99.3% purity after refinement.
Co-reporter:Zhang-De Long, Jian-He Xu, Li-Li Zhao, Jiang Pan, Sheng Yang, Ling Hua
Journal of Molecular Catalysis B: Enzymatic (2 July 2007) Volume 47(Issues 3–4) pp:105-110
Publication Date(Web):2 July 2007
DOI:10.1016/j.molcatb.2007.04.004
Lipase from Serratia marcescens ECU1010 was cloned and overexpressed in E. coli. After optimization, the maximum lipase activities reached 5000–6000 U/l and this recombinant lipase could enantioselectively hydrolyze (S)-ketoprofen esters into (S)-ketoprofen. Among six alkyl esters of racemic ketoprofen investigated, this lipase showed the best enantioselectivity for the kinetic resolution of ketoprofen ethyl ester, with an eep (enantiomeric excess of product) of 91.6% and E-value of 63 obtained at 48.2% conversion. Twelve nonionic surfactants were tested for enhancing the enantioselectivity of this lipase in the bioresolution of ketoprofen ethyl ester. A very high E-value of 1084 was achieved, with an optical purity of >99% eep and a yield of 42.6% in the presence of 3% Brij 92V. Further studies showed that the selectivity of the lipase was improved with the increase of Brij 92V concentration. The substrate (ketoprofen ethyl ester) does not inhibit the lipase activity, while the product (S)-ketoprofen inhibits the lipase activity to some extent. These results indicate that the S. marcescens lipase is very useful for biocatalytic production of chiral profens such as (S)-ketoprofen.
Co-reporter:Wei Yang, Jian-He Xu, Jiang Pan, Yi Xu, Zhi-Long Wang
Biochemical Engineering Journal (15 October 2008) Volume 42(Issue 1) pp:1-5
Publication Date(Web):15 October 2008
DOI:10.1016/j.bej.2008.04.014
Co-reporter:Xin Ju, Jiang Pan, Hui-Lei Yu, Chun-Xiu Li, Jian-He Xu
Biochemical Engineering Journal (15 November 2011) Volume 57() pp:63-68
Publication Date(Web):15 November 2011
DOI:10.1016/j.bej.2011.08.009
The catalytic performance of Pseudomonas sp. ECU1011 esterase (PsE) in the kinetic resolution of (R,S)-2-acetoxyphenylacetic acid (APA) was significantly improved by substrate modification, biocatalyst permeabilization and immobilization. The reaction system was modified, and the sodium salt of the substrate (APA Na), instead of APA, was hydrolyzed in aqueous phase without buffer. Considering the improved substrate solubility and the decreased biocatalyst inactivation, the reaction rate increased 3.7-folds and the spontaneous hydrolysis of the substrate reduced by 48%. During the cell permeabilization, the hydrolytic activity of the whole-cell biocatalyst was increased by 2.3-fold after 2 h of pretreatment with 10% (v/v) toluene. The permeabilized cells were further entrapped in calcium alginate, resulting in 171% activity recovery with a half-life of 123 h at 30 °C. Using the modified reaction system with high reaction rates and the modified biocatalyst with high activity and stability, this biocatalytic process can be transformed into a practical and environmentally friendly bioprocess for the efficient production of (S)-mandelic acid and (S)-o-chloromandelic acid.Graphical abstractDownload full-size imageHighlights► Repeated resolution of (R,S)-2-acetoxyphenylacetic acids with a new esterase (PsE) with high enantioselectivity. ► Reaction rate was raised 3.7-folds by using sodium salt of the acidic substrates. ► Spontaneous hydrolysis of substrate is depressed by half in the reformed reaction system. ► Permeabilization and immobilization of whole-cell PsE as provide efficient and stable biocatalysts.
Co-reporter:Zhi-Jun Zhang, Hui-Lei Yu, Tadayuki Imanaka, Jian-He Xu
Biochemical Engineering Journal (15 March 2015) Volume 95() pp:71-77
Publication Date(Web):15 March 2015
DOI:10.1016/j.bej.2014.12.009
•The catalytic activity of recombinant E. coli cells was increased by 3.6-fold by isopropanol permeabilization.•The process efficiency of the permeabilized cells-catalyzed reaction was 2-fold that of the non-permeabilized cells.•The immobilized permeabilized cells could be reused for 15 rounds without significant activity loss.Resting cells or immobilized cells are preferentially used as biocatalyst for biocatalytic processes due to the easy preparation and operation, however, the catalytic efficiency of biocatalyst is usually limited by the transport barrier of cell membrane. In this work, the transport barrier of recombinant Escherichia coli cells expressing the nitrilase from Alcaligenes sp. ECU0401 was relieved by isopropanol permeabilization. Under the optimal permeabilization conditions, the nitrilase activity of the permeabilized cells was 4.6-fold that of the cells without permeabilization. The permeabilized cells were evaluated for the enantioselective hydrolysis of mandelonitrile, which showed an initial reaction rate of about 2-fold that of the cells without permeabilization. The permeabilization process did not impair the stability of the cells and after simple immobilization by glutaraldehyde cross-linking, the immobilized permeabilized cells were successfully recycled for 15 runs without significant activity loss, suggesting the potential application of the immobilized permeabilized cells for the production of (R)-(−)-mandelic acid. The technology reported in this work might also be extended to other bioprocesses facing cell membrane transport barriers.
Co-reporter:Xian Zhang, Jian-He Xu, Dian-Hua Liu, Jiang Pan, Bing Chen
Biochemical Engineering Journal (15 June 2010) Volume 50(Issues 1–2) pp:47-53
Publication Date(Web):15 June 2010
DOI:10.1016/j.bej.2010.03.003
Co-reporter:Zhi-Jun Zhang, Jiang Pan, Jun-Feng Liu, Jian-He Xu, Yu-Cai He, You-Yan Liu
Journal of Biotechnology (10 March 2011) Volume 152(Issues 1–2) pp:24-29
Publication Date(Web):10 March 2011
DOI:10.1016/j.jbiotec.2011.01.013
The enantioselective hydrolysis of mandelonitrile with whole cells of a recombinant Escherichia coli expressing nitrilase activity was severely inhibited by the substrate at high concentrations (>300 mM), which resulted in a low yield of the target product (R)-(−)-mandelic acid. To relieve the substrate inhibition and to enhance the (R)-(−)-mandelic acid productivity, eight water–organic solvent biphasic systems were attempted in this work. Toluene was found to be the most suitable solvent as the organic phase among the solvents tested. Various parameters were systematically examined and optimized in shake flasks. The phase volume ratio, buffer pH and reaction temperature were shown to be sensitive parameters affecting both the yield and the enantiopurity of product in the biphasic system. Under the optimized conditions, significant enhancement of substrate tolerance from 200 mM to 500 mM and average productivity from 179.6 g l−1 d−1 to 352.6 g l−1 d−1 were achieved. Subsequently, the biocatalytic hydrolysis of mandelonitrile was successfully carried out in a stirred reactor (2-l scale) by repeated use of the calcium alginate entrapped cells for 5 batches, affording 110.7 g (R)-(−)-mandelic acid in 98.0% ee (enantiomeric excess) and a specific production of 13.8 g (mandelic acid) g−1 (cell), respectively.
Co-reporter:Chang-Wei Fan, Guo-Chao Xu, Bao-Di Ma, Yun-Peng Bai, Jie Zhang, Jian-He Xu
Journal of Biotechnology (10 February 2015) Volume 195() pp:67-71
Publication Date(Web):10 February 2015
DOI:10.1016/j.jbiotec.2014.10.026
•A novel D-mandelate dehydrogenase was discovered from Lactobacillus brevis.•This LbDMDH displayed the highest catalytic efficiency as compared to values reported in literatures.•As much as 0.2 M (30.4 g L−1) of rac-mandelate could be converted at 1-L scale into chiral L-phenylglycine with 96.4% conversion, giving a space-time yield of 50.4 g L−1 d−1.•Five chiral L-phenylglycine derivatives were also prepared employing this newly developed cascade reaction.A novel NAD+-dependent D-mandelate dehydrogenase was identified from Lactobacillus brevis (LbDMDH). After purified to homogeneity, the optimum pH and temperature for oxidation of D-mandelate were pH 10.0 and 40 °C, and the Km and kcat were 1.1 mM and 355 s−1 respectively. Employing the LbDMDH together with a mandelate racemase from Pseudomonas putida and a leucine dehydrogenase (EsLeuDH) from Exiguobacterium sibiricum, we established a three-step one-pot domino reaction system for preparing chiral L-phenylglycine from racemic mandelic acid with internal cofactor recycling. Under the optimum conditions, 30.4 g rac-mandelic acid (0.2 M) at 1 L scale had been converted into chiral L-phenylglycine, with 96.4% conversion, 86.5% isolation yield, >99% eep and 50.4 g L−1 d−1 space-time yield.Download high-res image (167KB)Download full-size image
Co-reporter:Gao-Wei Zheng, Jiang Pan, Hui-Lei Yu, Minh-Thu Ngo-Thi, Chun-Xiu Li, Jian-He Xu
Journal of Biotechnology (1 October 2010) Volume 150(Issue 1) pp:108-114
Publication Date(Web):1 October 2010
DOI:10.1016/j.jbiotec.2010.07.007
A gene encoding an esterase of Bacillus subtilis ECU0554 previously isolated from soil was cloned and overexpressed in Escherichia coli BL21. The recombinant esterase (recBsE) showed the best enantioselectivity (E > 100) towards dl-menthyl acetate, in contrast to dl-menthyl esters propionate and butyrate. A high ratio of substrate to catalyst (S/C-ratio, ≥50) was achieved in the kinetic resolution of dl-menthyl acetate by using whole cells of recombinant E. coli BL21. Some key parameters of the biocatalytic process, including amount of cosolvent, catalyst loading and substrate loading, were optimized. Compared with the process catalyzed by wild-type whole cells of B. subtilis ECU0554, the second-generation bioprocess using whole cells of recombinant E. coli BL21 afforded a 40-fold improvement in S/C-ratio and a 75-fold improvement in the volumetric productivity per biocatalyst loading. Moreover, the substrate loading was increased up to 200 g L−1 (∼1 M), the biocatalyst loading was reduced to 2.5 g L−1 and the space-time yield was improved from 54 g L−1 d−1 to 202 g L−1 d−1.
Co-reporter:Xue-Cheng Jiao, Jiang Pan, Xu-Dong Kong, Jian-He Xu
Biochemical and Biophysical Research Communications (1 January 2017) Volume 482(Issue 1) pp:159-163
Publication Date(Web):1 January 2017
DOI:10.1016/j.bbrc.2016.11.020
Co-reporter:Wen-Ya Lu, Guo-Qiang Lin, Hui-Lei Yu, Ai-Ming Tong, Jian-He Xu
Journal of Molecular Catalysis B: Enzymatic (1 February 2007) Volume 44(Issue 2) pp:72-77
Publication Date(Web):1 February 2007
DOI:10.1016/j.molcatb.2006.07.007
Various alkyl β-d-glucopyranosides were synthesized via a very simple procedure, by using Prunus dulcis (almond) kernel meal as an inexpensive biocatalyst. The P. dulcis (almond) meal is more robust than commercially available one and recyclable. Some popular fruits seed, including Prunus persica (peach), Prunus armeniaca (apricot), Malus pumila (apple), and Eriobotrya japonica (loquat), were tested as potential sources of the glucosidase in the form of meal. It was found that P. persica kernel meal and M. pumila seed meal not only had higher activity but also showed some complementary substrate specificities to that of almond β-glucosidase.
Co-reporter:Hieu-Huy Nguyen-Tran, Gao-Wei Zheng, Xu-Hong Qian and Jian-He Xu
Chemical Communications 2014 - vol. 50(Issue 22) pp:NaN2864-2864
Publication Date(Web):2014/01/27
DOI:10.1039/C3CC48590K
A new bacterial nitroreductase has been identified and used as a biocatalyst for the controllable reduction of a variety of nitroarenes with an electron-withdrawing group to the corresponding N-arylhydroxylamines under mild reaction conditions with excellent selectivity (>99%). This method therefore represents a green and efficient method for the synthesis of arylhydroxylamines.
Co-reporter:Bing Chen, Hai-Feng Yin, Zhen-Sheng Wang, Jia-Ying Liu and Jian-He Xu
Chemical Communications 2010 - vol. 46(Issue 16) pp:NaN2756-2756
Publication Date(Web):2010/02/25
DOI:10.1039/B925402A
A new chemo-enzymatic route to both isomers of 2-hydroxy-4-phenylbutyric acid is reported. The key step is the lactonase-catalyzed hydrolysis of cis- and trans-2-hydroxy-4-phenyl-4-butyrolactones followed by hydrogenation over Pd/C to afford optically pure 2-hydroxy-4-phenylbutyric acid.
Co-reporter:Guo-Chao Xu, Yue-Peng Shang, Hui-Lei Yu and Jian-He Xu
Chemical Communications 2015 - vol. 51(Issue 86) pp:NaN15731-15731
Publication Date(Web):2015/09/03
DOI:10.1039/C5CC06796K
Key residues of Debaryomyces hansenii carbonyl reductase in the determination of the reducing activity towards aryl haloketones were identified through combinatorial mutation of conserved residues. This study provides a green and efficient biocatalyst for the synthesis of (S)-aryl halohydrins.
Co-reporter:Yan Ni, Chun-Xiu Li, Li-Juan Wang, Jie Zhang and Jian-He Xu
Organic & Biomolecular Chemistry 2011 - vol. 9(Issue 15) pp:NaN5468-5468
Publication Date(Web):2011/04/28
DOI:10.1039/C1OB05285C
A carbonyl reductase gene (yueD) from Bacillus sp. ECU0013 was heterologously overexpressed in Escherichia coli, and the encoded protein (BYueD) was purified to homogeneity and characterized. The NADPH-dependent reductase showed a broad substrate spectrum towards different aromatic ketones, and α- and β-ketoesters. Although the enantioselectivity was high to moderate for the reduction of α-ketoesters, all the tested β-ketoesters and aromatic ketones were reduced to the corresponding chiral alcohols in enantiomerically pure forms. Furthermore, the practical applicability of this enzyme was evaluated for the reduction of ethyl 4-chloro-3-oxobutanoate (1a). Using Escherichia colicells coexpressing BYueD and glucose dehydrogenase, 215 g L−1 (1.3 M) of 1a was stoichiometrically converted to ethyl (R)-4-chloro-3-hydroxybutanoate ((R)-1b) in an aqueous-toluene biphasic system by using a substrate fed-batch strategy, resulting in an overall hydroxyl product yield of 91.7% with enantiomeric purity of 99.6% ee.
Co-reporter:Zheng-Jiao Luan, Fu-Long Li, Shuai Dou, Qi Chen, Xu-Dong Kong, Jiahai Zhou, Hui-Lei Yu and Jian-He Xu
Catalysis Science & Technology (2011-Present) 2015 - vol. 5(Issue 5) pp:NaN2629-2629
Publication Date(Web):2015/02/10
DOI:10.1039/C5CY00085H
The esterase RhEst1 from Rhodococcus sp. ECU1013 has been reported for the enantioselective hydrolysis of ethyl (S)-(+)-2,2-dimethylcyclopropane carboxylate, producing the building block of cilastatin. In this work, error-prone PCR and site-directed saturation mutagenesis were applied to RhEst1 for activity improvement, with the pH-indicator assay as a high-throughput screening method. As a result, RhEst1A147I/V148F/G254A, with mutations surrounding the substrate access channel, showed a 5-fold increase in its specific activity compared with the native enzyme, as well as a 4-fold increase in protein solubility. Combined with the determination of protein structures and computational analysis, this work shows that the amino acids around the substrate channel play a more important role in the activity evolution of RhEst1 than those in the active site.
Co-reporter:Yi Gong, Guo-Chao Xu, Qi Chen, Jin-Gang Yin, Chun-Xiu Li and Jian-He Xu
Catalysis Science & Technology (2011-Present) 2016 - vol. 6(Issue 7) pp:NaN2376-2376
Publication Date(Web):2015/11/09
DOI:10.1039/C5CY01723H
Structure-based directed evolution has been successfully applied to BSEV4, a variant of Bacillus subtilis esterase, for enantioselective hydrolysis of DL-menthyl esters with elevated thermostability. BSEV4 displayed only 90% enantiomeric excess (ee) in preparing L-menthol from DL-menthyl benzoate, whereas the quadruple mutant BSEV7, produced by iterative saturation mutagenesis, showed >99% ee. Partial deconvolution of BSEV7 by generating the four respective single mutants indicated that each of them only improved the enantioselectivity slightly, implying pronounced synergy when the mutations act together. BSEV9 and BSEV11, produced by site-directed mutagenesis and random mutagenesis, respectively, showed 2.5- and 20-fold higher activities than BSEV7 while retaining high E-values. With merely 0.1 g L−1 of BSEV11 loading (cell-free extract), 130 g L−1 of DL-menthyl benzoate was asymmetrically hydrolyzed within 6 h, resulting in an enantiopurity of >99% ee and a space-time yield of 138 g L−1 d−1. This suggests that it is feasible to establish an efficient bioprocess by simultaneously addressing multiple issues of biocatalyst performance using the iterative multi-target evolution approach.
Co-reporter:Xue-Cheng Jiao, Jiang Pan, Guo-Chao Xu, Xu-Dong Kong, Qi Chen, Zhi-Jun Zhang and Jian-He Xu
Catalysis Science & Technology (2011-Present) 2015 - vol. 5(Issue 8) pp:NaN4054-4054
Publication Date(Web):2015/05/29
DOI:10.1039/C5CY00537J
A novel 2-deoxyribose-5-phosphate aldolase (LbDERA) was identified from Lactobacillus brevis, with high activity, excellent thermostability and high tolerance against aldehyde substrates. The half-lives of LbDERA incubated in 300 mM acetaldehyde and chloroacetaldehyde were 37.3 and 198 min, respectively, which are 2- and 7-fold higher than those of EcDERA from Escherichia coli. The crystal structure of LbDERA determined at 1.95 Å resolution revealed a stable quaternary structure which might account for its excellent aldehyde tolerance. A single mutation, E78K, was introduced to LbDERA through a consensus sequence approach, resulting in significant improvements of both thermostability and aldehyde tolerance. According to the crystal structure of LbDERAE78K, two additional hydrogen bonds and one salt bridge were introduced compared with wild-type LbDERA. As a result of its high substrate tolerance, LbDERAE78K could efficiently catalyze a sequential aldol condensation with 0.7 M chloroacetaldehyde and 1.4 M acetaldehyde, affording a key chiral precursor of statins, (3R,5S)-6-chloro-2,4,6-trideoxyhexapyranoside, with an unprecedented space-time yield of 792.5 g L−1 d−1 and only 2.5 g L−1 of catalyst loading.
Co-reporter:Jin-Gang Yin, Yi Gong, Xiao-Yan Zhang, Gao-Wei Zheng and Jian-He Xu
Catalysis Science & Technology (2011-Present) 2016 - vol. 6(Issue 16) pp:NaN6310-6310
Publication Date(Web):2016/05/27
DOI:10.1039/C6CY00786D
A novel non-heme chloroperoxidase (SvGL) with promiscuous (−)-γ-lactamase activity towards Vince lactam was identified from Streptomyces viridochromogenes by genome data-mining. SvGL possesses high activity and excellent thermal stability and enantioselectivity. Furthermore, it is able to tolerate extremely high substrate concentrations (4.0 M, 436.5 g L−1). Using the newly discovered (−)-γ-lactamase as a biocatalyst, an efficient and environmentally benign process for the production of (+)-γ-lactam was developed. The process allowed an enantioselective resolution of 436.5 g L−1 racemic γ-lactam with only 0.2 g L−1 lyophilized cell-free extract, affording an extremely high substrate/catalyst ratio of 2183 (g g−1), a space-time yield of 458 g L−1 d−1, and a very low E factor (environmental factor) of 5.7 (kg waste per kg product) even when the process water is included.