Nils Metzler-Nolte

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Organization: Ruhr-University Bochum , Germany
Department: Department of Inorganic Chemistry I-Bioinorganic Chemistry
Title: (PhD)

TOPICS

Co-reporter:Lukasz J. Raszeja;Daniel Siegmund;Anna L. Cordes;Jörn Güldenhaupt;Klaus Gerwert;Stephan Hahn
Chemical Communications 2017 vol. 53(Issue 5) pp:905-908
Publication Date(Web):2017/01/10
DOI:10.1039/C6CC07553C
The synthesis and photophysical properties of a novel series of rhenium tricarbonyl complexes based on tridentate phenanthridinyl-containing ligands are described. Photophysical data reveal beneficial luminescence behaviour especially for compounds with an asymmetric ligand set. These advantageous properties are not limited to organic solvents, but indeed also improved in aqueous solutions. The suitability of our new rhenium complexes as potent imaging agents has been confirmed by fluorescence microscopy on living cancer cells, which also confirms superior long-time stability under fluorescence microscopy conditions. Colocalisation studies with commercial organelle stains reveal an accumulation of the complexes in the endoplasmic reticulum for all tested cell lines.
Co-reporter:Daniel Siegmund;Nicole Lorenz;Yvonne Gothe;Christian Spies;Bastian Geissler;Pascal Prochnow;Patrick Nuernberger;Julia E. Bandow
Dalton Transactions 2017 vol. 46(Issue 44) pp:15269-15279
Publication Date(Web):2017/11/14
DOI:10.1039/C7DT02874A
A series of novel Re(I)(CO)3–NHC complexes bearing unsubstituted benzimidazol-2-ylidene ligands as well as a variety of bisimine ligands has been prepared and comprehensively characterised. The complexes were found to exhibit potent antimicrobial activity on Gram-positive bacterial strains in the low micromolar concentration range, rendering these compounds interesting lead structures for the development of novel metal-based antibiotic agents. Further, the complexes exhibit pronounced luminescence with large Stokes shifts in acetonitrile and water at ambient temperature. The photophysical properties including luminescence lifetimes and quantum yields are consistent with emission from 3MLCT (d(Re) → π*(bisimine)) states.
Co-reporter:Bauke Albada and Nils Metzler-Nolte
Chemical Reviews 2016 Volume 116(Issue 19) pp:11797-11839
Publication Date(Web):September 14, 2016
DOI:10.1021/acs.chemrev.6b00166
Peptides are important biological molecular entities in biomedical research. They can be prepared in a large variety of shapes, with a host of chemical functions, and tailored for specific applications. Organometallic medicinal chemistry is a relatively young field that explores biomedical and bioanalytical applications of organometallic complexes, that is, metal compounds with at least one direct, covalent metal–carbon bond. The conjugation of peptides to such medicinally active organometallic moieties started only about 20 years ago, and it has been very beneficial for the development of bioorganometallic chemistry in general. Similarly, the biomedical properties of peptides have been altered by their conjugation to organometallic (OM) moieties. In this review, synthetic methods by which OM moieties can be conjugated to peptides via a carbon–metal bond are described, and selected medicinal applications of such conjugates are discussed. Inorganic coordination complexes between metal ions and peptides are excluded from this review. Also, the labeling of peptides with radiometals and applications of radiolabeled peptides will not be treated herein. First, modifications of the peptide backbone (either N- or C-terminally, or both) with organometallic moieties will be described, including the insertion of OM moieties as part of the peptide backbone. Then side-chain modifications will be reported, among them the most recent strategies for chemoselective arene metalation on peptides. Finally, approaches by which multiple metalation can be achieved are explored. In each section, selected examples of biological applications are highlighted.
Co-reporter:Jack C. Slootweg, H. Bauke Albada, Daniel Siegmund, and Nils Metzler-Nolte
Organometallics 2016 Volume 35(Issue 18) pp:3192-3196
Publication Date(Web):September 16, 2016
DOI:10.1021/acs.organomet.6b00544
Labeling of biomolecules with organometallic moieties holds great promise as a tool for chemical biology and for the investigation of biochemical signaling pathways. Herein, we report a robust and reproducible synthetic strategy for the synthesis of ruthenocenecarboxylic acid, giving the acid in 53% overall yield. This organometallic label was conjugated via solid-phase peptide synthesis in near-quantitative yield to a number of different biologically active peptides, using only 1 equiv of the acid and coupling reagents, thereby avoiding wasting the precious organometallic acid. This optimized method of stoichiometric N-terminal acylation was then also successfully applied to conjugating ferrocenecarboxylic acid and a novel organometallic ReI(CO)3 complex, showing the generality of the synthetic procedure.
Co-reporter:Dr. Yvonne Gothe;Dr. Tiziano Marzo;Dr. Luigi Messori;Dr. Nils Metzler-Nolte
Chemistry - A European Journal 2016 Volume 22( Issue 35) pp:12487-12494
Publication Date(Web):
DOI:10.1002/chem.201601542

Abstract

A series of structurally related mono- and bis-NHC–iridium(I) (NHC: N-heterocyclic carbene) complexes have been investigated for their suitability as potential anticancer drugs. Their spectral behaviour in aqueous buffers under physiological-like conditions and their cytotoxicity against the cancer cell lines MCF-7 and HT-29 are reported. Notably, almost all complexes exhibit significant cytotoxic effects towards both cancer cell lines. In general, the cationic bis-carbene complexes show higher stability and greater anticancer activity than their neutral mono-carbene analogues with IC50 values in the high nanomolar range. Furthermore, to gain initial mechanistic insight, the interactions of these iridium(I)–NHC complexes with two model proteins, namely lysozyme and cytochrome c, were explored by HR-ESI-MS analyses. The different protein metalation patterns of the complexes can be roughly classified into two distinct groups. Those interactions give us a first idea about the possible mechanism of action of this class of compounds. Overall, our findings show that iridium(I)–NHC complexes represent very interesting candidates for further development as new metal-based anticancer drugs.

Co-reporter:Malay Patra, Michaela Wenzel, Pascal Prochnow, Vanessa Pierroz, Gilles Gasser, Julia E. Bandow and Nils Metzler-Nolte  
Chemical Science 2015 vol. 6(Issue 1) pp:214-224
Publication Date(Web):13 Oct 2014
DOI:10.1039/C4SC02709D
The worrying appearance of microbial resistance to antibiotics is a worldwide problem which needs to be tackled urgently. Microbial resistance to the common classes of antibiotics involving purely organic compounds unfortunately develops very rapidly and in most cases, resistance was detected soon after or even before release of the antibiotic to the market. Therefore, novel concepts for antibiotics must be investigated, and metal-containing compounds hold particular promise in that area. Taking a trimetallic complex (1a) which contains a ferrocenyl (Fc), a CpMn(CO)3 (cymantrene) and a [(dpa)Re(CO)3] residue as the lead structure, a systematic structure–activity relationship (SAR) study against various gram-positive pathogenic bacteria including methicillin-resistant Staphylococcus aureus (MRSA) strains was performed. The [(dpa)Re(CO)3] moiety was discovered to be the essential unit for the observed antibacterial activity of 1a. The ferrocenyl and CpMn(CO)3 units can be replaced one by one or both together by organic moieties such as a phenyl ring without loss of antibacterial activity. The most potent mono-metallic complex (9c′) has an antibacterial activity comparable to the well-established organic drugs amoxicillin and norfloxacin and importantly, only moderate cytotoxicity against mammalian cells. Microbiological studies on membrane potential, membrane permeabilization, and cell wall integrity revealed that 9c′ targets the bacterial membrane and disturbs cell wall integrity, but shows more efficient membrane permeabilization than the lead structure 1a.
Co-reporter:Y. Gothe, T. Marzo, L. Messori and N. Metzler-Nolte  
Chemical Communications 2015 vol. 51(Issue 15) pp:3151-3153
Publication Date(Web):21 Jan 2015
DOI:10.1039/C4CC10014J
A new NHC iridium(I) complex (1) showing significant antiproliferative properties in vitro is described here. Its crystal structure, solution behaviour and interactions with the model proteins cytochrome c (cyt c) and lysozyme were investigated. High resolution ESI-MS measurements suggest that this iridium(I) complex acts as a prodrug and binds cyt c tightly through an unusual “oxidative” mechanism. Eventually, an iridium(III)–NHC fragment is found associated to the protein.
Co-reporter:Barbara C. Hoffknecht, H. Bauke Albada, Marina Sturm, Pascal Prochnow, Julia E. Bandow and Nils Metzler-Nolte  
MedChemComm 2015 vol. 6(Issue 2) pp:372-376
Publication Date(Web):22 Dec 2014
DOI:10.1039/C4MD00327F
Multivalent display of identical ultrashort (only 2–3 amino acids long) antimicrobial peptides (AMPs) was used in order to create potential new antimicrobial agents. A series of small synthetic arginine and tryptophan containing peptides was synthesized and covalently bound to two different trivalent scaffold molecules using the copper(I)-catalyzed alkyne–azide cycloaddition (CuAAC) reaction. The effect of steric preorganization of AMPs on the antibacterial activity was studied using a 1,3,5-tris(azidomethyl)benzene and a 1,3,5-tris(azidomethyl)-2,4,6-triethylbenzene substituted scaffold. The comparison of these two scaffolds showed that preorganisation leads to at least twice as active compounds. We furthermore obtained a synergistic effect and could show that the presence of a certain number of amino acids in close proximity is more important than their relative spatial orientation.
Co-reporter:Marcus Maschke;Jens Grohmann;Claudia Nierhaus;Dr. Max Lieb ; Dr. Nils Metzler-Nolte
ChemBioChem 2015 Volume 16( Issue 9) pp:1333-1342
Publication Date(Web):
DOI:10.1002/cbic.201500060

Abstract

We report the synthesis of metallocene compounds Cp2M with two different electron-withdrawing substituents on both cyclopentadienyl rings (hexafluoroacetone (HFA) and chlorobenzoyl (15); HFA and COOH (6 and 7), M=Fe or Ru). The COOH-containing derivatives were used to synthesize peptide bioconjugates with enkephalin (8 and 9) and neurotensin (10 and 11) as well as fluorescein-labeled neurotensin (12). All the molecules were fully characterized, including X-ray structures for 6 and 7. The physicochemical properties (lipophilicity and electrochemistry) and cytotoxicity on MCF-7, HT-29, and PT-45 cancer cells were evaluated for selected compounds. Electrochemical investigation by cyclic voltammetry revealed that all bis-substituted metallocenes are up to 300 mV harder to oxidize compared to the monosubstituted 2-ferrocenylhexafluoropropan-2-ol (FcHFA: Δ=214 mV; disubstituted derivatives: up to Δ=512 mV; both vs. FcH0/+). For the bis-substituted compounds, log P determinations by RP-HPLC showed increased lipophilicity in comparison to the monosubstituted FcHFA and RcHFA. Cellular uptake was investigated by fluorescence microcopy, and this revealed endosomal entrapment for 12.

Co-reporter:Barbara C. Hoffknecht;Dennis J. Worm;Sra Bobersky;Pascal Prochnow;Dr. Julia E. Bow;Dr. Nils Metzler-Nolte
ChemMedChem 2015 Volume 10( Issue 9) pp:1564-1569
Publication Date(Web):
DOI:10.1002/cmdc.201500220

Abstract

Peptide dendrimers are a class of molecules of high interest in the search for new antibiotics. We used microwave-assisted, copper(I)-catalyzed alkyne–azide cycloaddition (CuAAC; “click” chemistry) for the simple and versatile synthesis of a new class of multivalent antimicrobial peptides (AMPs) containing solely arginine and tryptophan residues. To investigate the influence of multivalency on antibacterial activity, short solid-phase- synthesized azide-modified Arg-Trp-containing peptides were “clicked” to three different alkyne-modified benzene scaffolds to access scaffolds with one, two, or three peptides. The antibacterial activity of 15 new AMPs was investigated by minimal inhibitory concentration (MIC) assays on five different bacterial strains, including a multidrug-resistant Staphylococcus aureus (MRSA) strain. With ultrashort (2–3 residues) peptides, a clear synergistic effect of the trivalent display was observed, whereas this effect was not apparent with longer peptides. The best candidates showed activities in the low-micromolar range against Gram-positive MRSA. Surprisingly, the best activity against Gram-negative Acinetobacter baumannii was observed with an ultrashort dipeptide on the trivalent scaffold (MIC: 7.5 μM). The hemolytic activity was explored for the three most active peptides. At concentrations ten times the MIC values, <1 % hemolysis of red blood cells was observed.

Co-reporter:H. Bauke Albada, Pascal Prochnow, Sandra Bobersky, Julia E. Bandow and Nils Metzler-Nolte  
Chemical Science 2014 vol. 5(Issue 11) pp:4453-4459
Publication Date(Web):2014/08/05
DOI:10.1039/C4SC01822B
The rapid increase in resistance against common antibiotics calls for the development of novel antibiotics, particularly against multi-resistant bacteria such as the methicillin-resistant Staphylococcus aureus (MRSA). In this work, the two group 8 metallocenoyl derivatives ferrocenoyl (FcC(O)-) or ruthenocenoyl (RcC(O)-) were attached to the N-terminus of two libraries of short antimicrobial peptides (AMPs), resulting in organometallic-AMP derivatives with as yet unparalleled antibacterial activities. In addition, these organometallic AMPs only cause limited lysis of human red blood cells (hRBCs). Our structure–activity relationship (SAR) study on these metallocenoylated peptides showed that specific combinations of L- and D-amino acid residues result in peptides with significantly improved antibacterial activity. Whereas the all-L FcC(O)-containing lead peptide had a MIC of 12 μM against MRSA, several peptides were found with MIC-values as low as 1.5–3 μM, a 4–8-fold increase in activity. For the RcC(O)-derivatized peptides a similar result was obtained: against MRSA a MIC value of 5.8 μM for the all-L peptide could be lowered to 0.7 μM, an 8-fold improvement. In addition, exposure of human red blood cells with 121 μM of the most active peptides led to a maximum hemolysis of 6%, indicating prominent selectivity that can be used to realize antibiotics based on organometallic-AMPs. We have hereby performed a systematic and highly successful SAR optimization against the two crucial parameters, i.e. antibacterial activity and hemolysis. Importantly, some of the RcC(O)-derivatized peptides presented here are among the most active antibacterial peptides; they approach or even exceed the activity of vancomycin.
Co-reporter:Alejro Gutiérrez;M. Concepción Gimeno;Isabel Marzo
European Journal of Inorganic Chemistry 2014 Volume 2014( Issue 15) pp:
Publication Date(Web):
DOI:10.1002/ejic.201402103

Abstract

Thiazolium salts 2ab derived from a dipeptide Boc-Gly-(Thz-Ala)-OMe (1b) containing the nonproteinogenic amino acid L-thiazolylalanine (Thz-Ala) can be used to generate the corresponding N,S-heterocyclic carbene (NSHC) gold(I) (3ab) and silver(I) (4) complexes. Reaction of the NSHC-gold(I) iodide 3b with Boc-Cys-Gly-OMe gives access to the peptide bioconjugate 5, which contains a NSHC-Au-(S-Cys) unit. Compounds 35 constitute the first coin metal NSHC-peptide complexes. All new compounds were comprehensively characterized by 1H, 13C and 2D-NMR spectroscopy, IR spectroscopy, and mass spectrometry. Their cytotoxicity was studied in vitro against three different tumor cell lines (A549, Jurkat T and MiaPaca2) and IC50 values in the low micromolar range (< 25 μM), and as low as 0.4 μM in the best case were observed. All new Au complexes show good stability and promising properties and, as a result, this novel type of gold(I) carbene complex opens possibilities for the design of new metal-based drugs with promising antitumor characteristics.

Co-reporter:Marcus Maschke;Dr. Hamed Alborzinia;Dr. Max Lieb;Dr. Stefan Wölfl;Dr. Nils Metzler-Nolte
ChemMedChem 2014 Volume 9( Issue 6) pp:1188-1194
Publication Date(Web):
DOI:10.1002/cmdc.201402001

Abstract

We report the synthesis of trifluoromethylated metallocenes (M=Fe, Ru) and related metal-free compounds for comparison of their biological properties with the aim to establish structure–activity relationships toward the anti-proliferative activity of this compound class. All new compounds were comprehensively characterized by NMR spectroscopy (1H, 13C, 19F), mass spectrometry, IR spectroscopy, and elemental analysis. A single-crystal X-ray structure was obtained on the Ru derivative, 1-(1-hydroxy-1-hexafluoromethylethyl)ruthenocene (3). The cytotoxicity of all compounds was tested on MCF-7, HT-29, and PT-45 cells, and IC50 values as low as 12 μM were observed. Both the metallocene moiety and the hydroxy function are crucial for cytotoxicity. In addition, the activity decreased sharply even if only one trifluoromethyl group was replaced with a methyl group. Electrochemical investigations by cyclic voltammetry revealed that all CF3-containing compounds are harder to oxidize than the unsubstituted metallocenes. Moreover, log P determination by RP-HPLC showed the fluorinated derivatives to have higher lipophilicity, with log P values up to 4.6. At the same time, the generation of reactive oxygen species (ROS) in Jurkat cells by these compounds was investigated by flow cytometry. Strong ROS production was shown exclusively for the bis-CF3 derivative 1-(1-hydroxy-1-hexafluoromethylethyl)ferrocene (1) after 6 and 24 h. Also on the Jurkat cell line, only compound 1 strongly induces necrosis after 24 and 48 h, as shown by annexin V/propidium iodide staining. No induction of apoptosis was observed. We propose that compound 1 is more efficiently incorporated into cancer cells relative to all other derivatives, causing significant induction of oxidative stress within the cell, which ultimately leads to cell death.

Co-reporter:Dr. Igor Kitanovic;Suzan Can;Dr. Hamed Alborzinia;Dr. Ana Kitanovic;Vanessa Pierroz;Anna Leonidova;Dr. Antonio Pinto;Priv.Doz.Dr. Bernhard Spingler;Priv.Doz.Dr. Stefano Ferrari;Roberto Molteni;Dr. Andreas Steffen;Dr. Nils Metzler-Nolte;Dr. Stefan Wölfl;Dr. Gilles Gasser
Chemistry - A European Journal 2014 Volume 20( Issue 9) pp:2496-2507
Publication Date(Web):
DOI:10.1002/chem.201304012

Abstract

The photophysical properties of [Re(CO)3(L-N3)]Br (L-N3=2-azido-N,N-bis[(quinolin-2-yl)methyl]ethanamine), which could not be localized in cancer cells by fluorescence microscopy, have been revisited in order to evaluate its use as a luminescent probe in a biological environment. The ReI complex displays concentration-dependent residual fluorescence besides the expected phosphorescence, and the nature of the emitting excited states have been evaluated by DFT and time-dependent (TD) DFT methods. The results show that fluorescence occurs from a 1LC/MLCT state, whereas phosphorescence mainly stems from a 3LC state, in contrast to previous assignments. We found that our luminescent probe, [Re(CO)3(L-N3)]Br, exhibits an interesting cytotoxic activity in the low micromolar range in various cancer cell lines. Several biochemical assays were performed to unveil the cytotoxic mechanism of the organometallic ReI bisquinoline complex. [Re(CO)3(L-N3)]Br was found to be stable in human plasma indicating that [Re(CO)3(L-N3)]Br itself and not a decomposition product is responsible for the observed cytotoxicity. Addition of [Re(CO)3(L-N3)]Br to MCF-7 breast cancer cells grown on a biosensor chip micro-bioreactor immediately led to reduced cellular respiration and increased glycolysis, indicating a large shift in cellular metabolism and inhibition of mitochondrial activity. Further analysis of respiration of isolated mitochondria clearly showed that mitochondrial respiratory activity was a direct target of [Re(CO)3(L-N3)]Br and involved two modes of action, namely increased respiration at lower concentrations, potentially through increased proton transport through the inner mitochondrial membrane, and efficient blocking of respiration at higher concentrations. Thus, we believe that the direct targeting of mitochondria in cells by [Re(CO)3(L-N3)]Br is responsible for the anticancer activity.

Co-reporter:Michaela Wenzel, Malay Patra, Christoph Helmut Rudi Senges, Ingo Ott, Jennifer Janina Stepanek, Antonio Pinto, Pascal Prochnow, Cuong Vuong, Sina Langklotz, Nils Metzler-Nolte, and Julia Elisabeth Bandow
ACS Chemical Biology 2013 Volume 8(Issue 7) pp:1442
Publication Date(Web):April 11, 2013
DOI:10.1021/cb4000844
Two hetero-tri-organometallic compounds with potent activity against Gram-positive bacteria including multi-resistant Staphylococcus aureus (MRSA) were identified. The compounds consist of a peptide nucleic acid backbone with an alkyne side chain, substituted with a cymantrene, a (dipicolyl)Re(CO)3 moiety, and either a ferrocene (FcPNA) or a ruthenocene (RcPNA). Comparative proteomic analysis indicates the bacterial membrane as antibiotic target structure. FcPNA accumulation in the membrane was confirmed by manganese tracing with atomic absorption spectroscopy. Both organometallics disturbed several essential cellular processes taking place at the membrane such as respiration and cell wall biosynthesis, suggesting that the compounds affect membrane architecture. Correlating with enhanced antibacterial activity, oxidative stress was induced only by the ferrocene-substituted compound. The organometallics described here target the cytoplasmic membrane, a clinically proven antibacterial target structure, feature a bactericidal but non-bacteriolytic mode of action and limited cytotoxicity within the limits of solubility. Thus, FcPNA represents a promising lead structure for the development of a new synthetic class of antibiotics.
Co-reporter:Florian Wieberneit, Annika Korste, H. Bauke Albada, Nils Metzler-Nolte and Raphael Stoll  
Dalton Transactions 2013 vol. 42(Issue 27) pp:9799-9802
Publication Date(Web):22 Mar 2013
DOI:10.1039/C3DT50635E
Binding of Leu-enkephalin and [RhIII(η5-Cp*)(η6-Tyr1)]Leu-enkephalin to the recently published crystal structures of the μ- and δ-opioid receptor is studied. Docking of free Leu-enkephalin reveals two preferred conformations, one of which suggests an alternative binding site for the tyrosine residue. Furthermore, the three-dimensional solution structure of [RhIII(η5-Cp*)(η6-Tyr1)]Leu-enkephalin was solved by using 2D NMR spectroscopic techniques.
Co-reporter:Mingyan Ma, Angélique Bétard, Irene Weber, Noura Saad Al-Hokbany, Roland A. Fischer, and Nils Metzler-Nolte
Crystal Growth & Design 2013 Volume 13(Issue 6) pp:2286-2291
Publication Date(Web):March 19, 2013
DOI:10.1021/cg301738p
Iron-based MIL-88B and NH2-MIL-88B microcrystals with high dispersibility and uniform size were successfully synthesized by using a rapid microwave-assisted solvothermal method. By carefully controlling the reaction conditions, the microwave method provided superior quality MIL-88B crystals in high yields and excellent phase purity. Framework flexibility was observed for both MIL-88B-Fe and NH2-MIL-88B-Fe frameworks in various solvents, which however significantly differs between the two materials. MIL-88B-Fe shrinks reversibly by about 25% only when it is dispersed in the strongly hydrogen bonding solvents water or methanol. In contrast, NH2-MIL-88B-Fe shrinks up to 33% upon replacement of dimethylformamide (DMF) by any other solvent studied (benzene, chloroform, acetone, acetonitrile, methanol, water). The change in unit cell parameters (shortening of the a axis) can be seen macroscopically, although the overall integrity of the materials is maintained. We suggest that hydrogen bonding between the oxygen atoms of the MIL-88B-Fe framework and solvent molecules plays an important role in the framework shrinkage, while in the NH2-MIL-88B-Fe framework additional hydrogen bonds may form and thus a different breathing behavior is observed.
Co-reporter:H. Bauke Albada, Pascal Prochnow, Sandra Bobersky, Sina Langklotz, Julia E. Bandow, and Nils Metzler-Nolte
ACS Combinatorial Science 2013 Volume 15(Issue 11) pp:585
Publication Date(Web):October 22, 2013
DOI:10.1021/co400072q
High systemic toxicity of antimicrobial peptides (AMPs) limits their clinical application to the treatment of topical infections; in parenteral systemic application of AMPs the problem of hemolysis is one of the first to be tackled. We now show that the selectivity of lipidated short synthetic AMPs can be optimized substantially by reducing their hemolytic activity without affecting their activity against methicillin resistant Staphylococcus aureus (MRSA). In order to identify the optimized peptides, two sets of 32 diastereomeric H-dArg-WRWRW-lLys(C(O)CnH2n+1)-NH2 (n = 7 or 9) peptides were prepared using a split–split procedure to perform a systematic l-to-d exchange scan on the central WRWRW-fragment. Compared to the all-l C8-lipidated lead sequence, diastereomeric peptides had very similar antibacterial properties, but were over 30 times less hemolytic. We show that the observed hemolysis and antibacterial activity is affected by both differences in lipophilicity of the different peptides and specific combinations of l- and d-amino acid residues. This study identified several peptides that can be used as tools to precisely unravel the origin of hemolysis and thus help to design even further optimized nontoxic very active short antibacterial peptides.Keywords: antibacterial peptides; hemolysis; l-to-d substitution scan; lipidated peptide; MRSA
Co-reporter:Dr. Mingyan Ma;Dr. Heshmat Noei;Bernd Mienert;Dr. Johanna Niesel;Dr. Eckhard Bill;Dr. Martin Muhler;Dr. Rol A. Fischer;Dr. Yuemin Wang;Dr. Ulrich Schatzschneider;Dr. Nils Metzler-Nolte
Chemistry - A European Journal 2013 Volume 19( Issue 21) pp:6785-6790
Publication Date(Web):
DOI:10.1002/chem.201201743

Abstract

Crystals of MIL-88B-Fe and NH2-MIL-88B-Fe were prepared by a new rapid microwave-assisted solvothermal method. High-purity, spindle-shaped crystals of MIL-88B-Fe with a length of about 2 μm and a diameter of 1 μm and needle-shaped crystals of NH2-MIL-88B-Fe with a length of about 1.5 μm and a diameter of 300 nm were produced with uniform size and excellent crystallinity. The possibility to reduce the as-prepared frameworks and the chemical capture of carbon monoxide in these materials was studied by in situ ultrahigh vacuum Fourier-transform infrared (UHV-FTIR) spectroscopy and Mössbauer spectroscopy. CO binding occurs to unsaturated coordination sites (CUS). The release of CO from the as-prepared materials was studied by a myoglobin assay in physiological buffer. The release of CO from crystals of MIL-88B-Fe with t1/2=38 min and from crystals of NH2-MIL-88B-Fe with t1/2=76 min were found to be controlled by the degradation of the MIL materials under physiological conditions. These MIL-88B-Fe and NH2-MIL-88B-Fe materials show good biocompatibility and have the potential to be used in pharmacological and therapeutic applications as carriers and delivery vehicles for the gasotransmitter carbon monoxide.

Co-reporter:H. Bauke Albada ; Florian Wieberneit ; Ingrid Dijkgraaf ; Jessica H. Harvey ; Jennifer L. Whistler ; Raphael Stoll ; Nils Metzler-Nolte ;Richard H. Fish Δ
Journal of the American Chemical Society 2012 Volume 134(Issue 25) pp:10321-10324
Publication Date(Web):June 7, 2012
DOI:10.1021/ja303010k
The bioconjugation of organometallic complexes with peptides has proven to be a novel approach for drug discovery. We report the facile and chemoselective reaction of tyrosine-containing G-protein-coupled receptor (GPCR) peptides with [Cp*Rh(H2O)3](OTf)2, in water, at room temperature, and at pH 5–6. We have focused on three important GPCR peptides; namely, [Tyr1]-leu-enkephalin, [Tyr4]-neurotensin(8-13), and [Tyr3]-octreotide, each of which has a different position for the tyrosine residue, together with competing functionalities. Importantly, all other functional groups present, i.e., amino, carboxyl, disulfide, phenyl, and indole, were not prominent sites of reactivity by the Cp*Rh tris aqua complex. Furthermore, the influence of the Cp*Rh moiety on the structure of [Tyr3]-octreotide was characterized by 2D NMR, resulting in the first representative structure of an organometallic-peptide complex. The biological consequences of these Cp*Rh-peptide complexes, with respect to GPCR binding and growth inhibition of MCF7 and HT29 cancer cells, will be presented for [(η6-Cp*Rh-Tyr1)-leu-enkephalin](OTf)2 and [(η6-Cp*Rh-Tyr3)-octreotide](OTf)2.
Co-reporter:S. David Köster, Hamed Alborzinia, Suzan Can, Igor Kitanovic, Stefan Wölfl, Riccardo Rubbiani, Ingo Ott, Phillip Riesterer, Aram Prokop, Klaus Merz and Nils Metzler-Nolte  
Chemical Science 2012 vol. 3(Issue 6) pp:2062-2072
Publication Date(Web):12 Apr 2012
DOI:10.1039/C2SC01127A
Solid-phase peptide synthesis (SPPS) is a versatile technique for the assembly of small to medium size peptides, that can help in the delivery of bound metal complexes to certain cellular compartments, for example in cancer cells. This work shows a new route to gold-peptide bioconjugates via a non-catalyzed [3 + 2] cycloaddition reaction of gold azides with alkynyl peptides. Gold(I) tetrapeptide conjugates with a mitochondria-targeting sequence were synthesized and display prolonged stability in the presence of thiol-containing biological media. Their antiproliferative potency against selected cancer cells (2–50 μM) corresponds to the lipophilicity of the conjugates. The cellular uptake of Au, determined by atomic absorption spectroscopy (AAS), shows that high initial uptake equals strong cytotoxicity. Respiration and acidification rates react immediately upon treatment with the Au-peptide conjugates, and a terminal breakdown of essential cellular functions is complete within ca. 12 h at most, as observed by online monitoring of the cancer cell metabolism in a microfluidic biosensor device (Bionas sensorchip system). The mode of action of these Au-peptide bioconjugates was elucidated by a variety of biochemical and cell biological experiments. First, a strong selective inhibition of the enzyme thioredoxin reductase (TrxR), a regulator of cellular redox processes, was found. In this context, elevated levels of reactive oxygen species (ROS) and strong effects on the respiration of isolated mouse liver mitochondria were found. These finally lead to cell death via apoptotic pathways, as indicated by flow cytometry, low mitochondrial membrane potential (MMP) and DNA fragmentation. Intriguingly, cisplatin-resistance in p53-mutant MDA-MB231 breast cancer cells could be overcome by the Au-peptide conjugates presented herein.
Co-reporter:Gilles Gasser, Nils Metzler-Nolte
Current Opinion in Chemical Biology 2012 Volume 16(1–2) pp:84-91
Publication Date(Web):April 2012
DOI:10.1016/j.cbpa.2012.01.013
Organometallic complexes have unique physico-chemical properties, which have been widely used in homogenous catalysis, for example, for the synthesis of lead compounds and drug candidates. Over the past two decades, a few scientists from all over the world have extended the use of the specific characteristics of these compounds (e.g. structural diversity, possibility of ligand exchange, redox and catalytic properties) for medicinal purposes. The results are stunning. A few organometallic compounds have already entered clinical trials and it can be anticipated that several more will follow in coming years. In this short review, we present the specific advantages that organometallic metal complexes have over purely organic and also coordination compounds. Furthermore, using specific examples, we illustrate how these particular properties can be put to good use in medicinal chemistry. The examples we present have an emphasis on, but are not restricted to, anti-cancer activity.Highlights► Organometallic complexes have a huge potential in medicinal chemistry. ► Organometallic compounds have specific advantages over purely organic compounds. ► The use of organometallics compounds is not limited to anti-cancer research. ► An organometallic compound could be the next anti-malarial drug on the market.
Co-reporter:Malay Patra, Klaus Merz and Nils Metzler-Nolte  
Dalton Transactions 2012 vol. 41(Issue 1) pp:112-117
Publication Date(Web):10 Nov 2011
DOI:10.1039/C1DT10918A
With more and more organometallic compounds receiving attention for applications in medicinal organometallic chemistry, the need arises for stereoselective syntheses of more complicated structures containing organometallic moieties, for example as isosteric substitutes for organic drug candidates. Herein, the synthesis and characterization of both diastereomers of a planar chiral (η6-arene)Cr(CO)3 containing carboxylic acid derivative, namely, 3-{η6-(1, 2, 3, 4-tetrahydro-1-endo/exo-methyl-2-oxonaphthalen-1-yl)-tricarbonylchromium(0)}propanoic acid (7 and 8) is reported. The molecular structures of both were confirmed by single crystal X-ray diffraction. The degree of diastereoselectivity in Cr(CO)3 complexation with methyl/tert-butyl-3-(1,2,3,4-tetrahydro-1-methyl-2-oxonaphthalen-1-yl)propanoate (4a/4b) vs. the Michael addition of methyl/tert-butyl acrylate to (η6-1-methyl-2-tetralone)Cr(CO)3 (9) was also examined. In the latter case the alkylation was found to be completely diastereoselective and gave methyl/tert-butyl-3-{η6-(1, 2, 3, 4-tetrahydro-1-endo-methyl-2-oxonaphthalen-1-yl)-tricarbonylchromium (0)}propanoate (5a and 5b) in excellent yield. Both the carboxylic acids 7 and 8 were coupled with the aminoresorcyclic acid core to achieve diastereomeric bioorganometallics 15a and 15b based on the naturally occurring antibioticplatensimycin lead structure (1a, see Fig. 1). The newly synthesized bioorganometallics were tested against various Gram-positive and Gram-negative bacterial strains but show no promising antibacterial activity.
Co-reporter:Gilles Gasser, Antonio Pinto, Sebastian Neumann, Anna M. Sosniak, Michael Seitz, Klaus Merz, Rolf Heumann and Nils Metzler-Nolte  
Dalton Transactions 2012 vol. 41(Issue 8) pp:2304-2313
Publication Date(Web):20 Dec 2011
DOI:10.1039/C2DT12114J
A new rhenium tricarbonyl complex of a bis(quinoline)-derived ligand (2-azido-N,N-bis((quinolin-2-yl)methyl)ethanamine, L–N3), namely [Re(CO)3(L–N3)]Br was synthesized and characterized in-depth, including by X-ray crystallography. [Re(CO)3(L–N3)]Br exhibits a strong UV absorbance in the range 300–400 nm with a maximum at 322 nm, and upon photoexcitation, shows two distinct emission bands at about 430 and 560 nm in various solvents (water, ethylene glycol). [Re(CO)3(L–N3)]Br could be conjugated, on a solid phase, to a peptide nucleic acid (PNA) oligomer using the copper(I)-catalyzed azide–alkyne cycloaddition reaction (Cu–AAC, “click” chemistry) and an alkyne-containing PNA building block to give Re–PNA. It was demonstrated that upon hybridisation with a complementary DNA strand (DNA), the position of the maxima and emission intensity for the hybrid Re–PNA·DNA remained mainly unchanged compared to those of the single strand Re–PNA. The rhenium-containing PNA oligomer Re–PNA could be then mediated in living cells where they have been shown to be non-toxic contrary to the general notion that organometallic compounds are usually unstable under physiological conditions and/or cytotoxic. Furthermore, Re–PNA could be detected in living cells using fluorescent microscopy.
Co-reporter:Malay Patra, Gilles Gasser and Nils Metzler-Nolte  
Dalton Transactions 2012 vol. 41(Issue 21) pp:6350-6358
Publication Date(Web):12 Mar 2012
DOI:10.1039/C2DT12460B
The emergence of bacterial resistance to commercial antibiotics is an issue of global importance. During the last two decades, the number of antibacterial agents that have been discovered and introduced into the market has steadily declined and failed to meet the challenges posed by rapidly increasing resistance of the pathogens against common antibacterial drugs. The development of new classes of compounds to control the virulence of the pathogens is therefore urgently required. This perspective describes the historical development in brief and recent advances on the preparation of small organometallic compounds as new classes of antibacterial agents with potential for clinical development.
Co-reporter:Marcus Maschke;Max Lieb
European Journal of Inorganic Chemistry 2012 Volume 2012( Issue 36) pp:5953-5959
Publication Date(Web):
DOI:10.1002/ejic.201200798

Abstract

We report the facile synthesis of four different trifluoromethylated metallocene triazoles and their biological evaluation (M = Fe and Ru). The cytotoxicity of all compounds was evaluated using MCF-7, HT-29, PT-45 and GM5657 cells and IC50 values as low as 33 μM were found. It was shown that the metallocene moiety is crucial for the cytotoxic effect. The electrochemical behavior of triazoles 36 was investigated by cyclic voltammetry. These electrochemical measurements revealed that all triazoles are less prone to oxidation than ferrocene. Moreover, Log P determination by RP-HPLC showed increased lipophilicity for the fluorinated derivatives with Log P values up to 3.8. Furthermore, successful bioconjugation could be achieved by coupling triazole 7 to the amino acid L-leucine.

Co-reporter:H. Bauke Albada, Pascal Prochnow, Sandra Bobersky, Sina Langklotz, Patrick Schriek, Julia E. Bandow, and Nils Metzler-Nolte
ACS Medicinal Chemistry Letters 2012 Volume 3(Issue 12) pp:980
Publication Date(Web):September 4, 2012
DOI:10.1021/ml300148v
The attachment of lipids to C- or N-terminally positioned lysine side-chain amino groups increases the activity of a short synthetic (Arg-Trp)3 antimicrobial peptide significantly, making these peptides even active against pathogenic Gram-negative bacteria. Thus, a peptide with strong activity against S. aureus (1.1–2 μM) and good activity against A. baumannii and P. aeruginosa (9–18 μM) was identified. The most promising peptide causes 50% hemolysis at 285 μM and shows some selectivity against human cancer cell lines. Interestingly, the increased activity of ferrocenoylated peptides is mostly due to the lipophilicity of the organometallic fragment.Keywords: anticancer; ferrocenoyl; Lipidated antimicrobial peptides; nonhemolytic
Co-reporter:Malay Patra, Gilles Gasser, Michaela Wenzel, Klaus Merz, Julia E. Bandow, and Nils Metzler-Nolte
Organometallics 2012 Volume 31(Issue 16) pp:5760-5771
Publication Date(Web):February 21, 2012
DOI:10.1021/om201146c
The multistep synthesis and biological evaluation of five structurally diverse, chiral and achiral CpMn(CO)3 (4, 7 and 8), (η6-arene)Cr(CO)3 (5), and [3]ferrocenophane-1-one (6) containing platensimycin (1) derivatives are described in this report. The structures were inspired by the antibiotic platensimycin. All the chiral compounds presented in this report are racemates. The new compounds were unambiguously characterized by 1H and 13C NMR spectroscopy, mass spectrometry, IR spectroscopy, and elemental analysis and in certain cases by X-ray crystallography (4, 16, 18, and 29). The antibacterial and antitumor activity of selected derivatives was tested. Molecular modeling suggests that the derivatives described here may well fit into the active site of the FabF enzyme, which is the biological target of platensimycin. Hence, the antimicrobial activities of our new bioorganometallices 4–8 and the protected amide intermediates 15, 17, 18, 23, 28, 29, and 31 were tested against various Gram-positive and Gram-negative bacterial strains. However, all compounds were inactive up to concentrations of 180 μg/mL. The cytotoxicity of compounds 4 and 6 and the protected amide intermediates 15, 17, 18, 23, 28, 29, and 31 was tested against HepG2 and PT45 mammalian cancer cell lines. Surprisingly, all compounds containing a trimethylsilylethyl ester functionality at the aromatic ring (17, 23, 29, and 31) displayed rather high cytotoxicity between 2 and 9 μM.
Co-reporter:Christian G. Hartinger, Nils Metzler-Nolte, and Paul J. Dyson
Organometallics 2012 Volume 31(Issue 16) pp:5677-5685
Publication Date(Web):July 16, 2012
DOI:10.1021/om300373t
This review provides an introduction into the fascinating area of organometallic anticancer compounds. Although the subject dates back many years, it has witnessed considerable growth only in the past decade. A brief overview of the subject together with recent pertinent examples is provided. The properties of organometallic compounds that lend themselves to medical applications, the main current approaches used, and possible avenues for future research are identified.
Co-reporter:Malay Patra and Nils Metzler-Nolte  
Chemical Communications 2011 vol. 47(Issue 41) pp:11444-11446
Publication Date(Web):21 Sep 2011
DOI:10.1039/C1CC14537A
A convenient synthesis of azidomethyl-ruthenocene and its use in the covalent labelling of amino acids, peptides and a peptide nucleic acid (PNA) monomer derivative by Cu(I) catalyzed azide–alkyne coupling (Cu-AAC, “click chemistry”) are described.
Co-reporter:Gilles Gasser ; Ingo Ott
Journal of Medicinal Chemistry 2011 Volume 54(Issue 1) pp:3-25
Publication Date(Web):November 15, 2010
DOI:10.1021/jm100020w
Co-reporter:Gilles Gasser, Anna M. Sosniak and Nils Metzler-Nolte  
Dalton Transactions 2011 vol. 40(Issue 27) pp:7061-7076
Publication Date(Web):03 May 2011
DOI:10.1039/C0DT01706J
Peptide Nucleic Acids (PNAs) are non-natural DNA/RNA analogues with favourable physico-chemical properties and promising applications. Discovered nearly 20 years ago, PNAs have recently re-gained quite a lot of attention. In this Perspective article, we discuss the latest advances on the preparation and utilisation of PNA monomers and oligomers containing metal complexes. These metal- conjugates have found applications in various research fields such as in the sequence-specific detection of nucleic acids, in the hydrolysis of nucleic acids and peptides, as radioactive probes or as modulators of PNA˙DNA hybrid stability, and last but not least as probes for molecular and cell biology.
Co-reporter:Mingyan Ma, Annika Gross, Denise Zacher, Antonio Pinto, Heshmat Noei, Yuemin Wang, Roland A. Fischer and Nils Metzler-Nolte  
CrystEngComm 2011 vol. 13(Issue 8) pp:2828-2832
Publication Date(Web):01 Mar 2011
DOI:10.1039/C0CE00416B
Dye modified MOF microcrystals were characterized by fluorescence microscopy (FM) and confocal laser scanning microscopy (CLSM) which visualized the position and distribution of fluorescent dyes encapsulated into MOF crystals and provided proof for selective, post-synthetic covalent modification of the external surface of MOF crystals.
Co-reporter:Mingyan Ma, Denise Zacher, Xiaoning Zhang, Roland A. Fischer, and Nils Metzler-Nolte
Crystal Growth & Design 2011 Volume 11(Issue 1) pp:185-189
Publication Date(Web):November 23, 2010
DOI:10.1021/cg101130m
In this paper, we describe a general method for the controlled synthesis of nanosized isoreticular metal−organic framework (IRMOF-n) crystals, which for the first time combine good monodispersity and crystallinity. Nano-IRMOF-1 and -3 crystals are produced as examples. TEM and SEM micrographs show nanocrystals with regular shape and uniform size of 200−300 nm. While powder X-ray diffraction data show a high degree of crystallinity, the BET surface area of the nano-IRMOF-1 crystals of ca. 3000 m2/g demonstrates the large internal pore volume. The nanocrystal growth mechanism under the assistance of hexadecyltrimethylammonium bromide (CTAB) as surfactant was studied by systematically changing the parameters of the preparation. The influence of each step in the preparation could be explained, and a rational synthesis protocol was thus obtained. Thereby, this work provides access to much-desired but difficult to obtain high-quality nano-MOF crystals through an optimized and rational synthesis. Moreover, the synthesis principles outlined herein should be transferable to other nanoporous materials with related growth mechanisms.
Co-reporter:Johannes Zagermann, Mariusz Molon and Nils Metzler-Nolte  
Dalton Transactions 2011 vol. 40(Issue 5) pp:1011-1015
Publication Date(Web):22 Nov 2010
DOI:10.1039/C0DT01121E
An improved synthesis for the mixed-ligand tris(pyrazolyl)borate sandwich compound TpRu(p-BrC6H4Tp) 1 by microwave-assisted synthesis starting from RuTp(COD)Cl (COD: 1,4-cyclooctadiene, Tp: hydrido-tris(pyrazolyl)borate) was developed. Air-stable 1 was characterized by an X-ray single crystal structure and has been converted to the acid-functionalized TpRu(p-(CO2H)-C6H4Tp) 2, which may be readily coupled to biomolecules as exemplified by the covalent attachment to valine-tert-butylester to give TpRu(p-(CO-Val-OtBu)-C6H4Tp) 3. In solid phase peptide synthesis (SPPS), 2 has been coupled to the pentapeptide Enkephalin, providing TpRu(p-(CO-Tyr-Gly-Gly-Phe-Leu-OH)-C6H4Tp) 4 as the first example of a ruthenium Tp sandwich bioconjugate.
Co-reporter:Malay Patra;Gilles Gasser;Michaela Wenzel;Klaus Merz;Julia E. Bow
European Journal of Inorganic Chemistry 2011 Volume 2011( Issue 22) pp:3295-3302
Publication Date(Web):
DOI:10.1002/ejic.201100497

Abstract

Concurrently with the emergence of purely organic derivatives of the naturally occurring antibiotic platensimycin (1a), herein, we describe the design, synthesis and biological evaluation of both the enantiomers of a C6–C7 ferrocene-fused platensimycin derivative 2b. (S,SP)- and (R,RP)-2b were prepared in nine steps starting from commercially available 4-ferrocenyl-4-oxobutyric acid via highly diastereoselective Michael additions of optically active planar-chiral ferrocene-fused cyclohexanone derivatives (5) with acrylate ester as the key step. Manual superimposition of (S,SP)-2b on platensimycin bound to the active site of its target enzyme FabF suggests that the former fits nicely in the active site and the C6–C7-fused ferrocene occupies a pocket similarly to the C8–C9-fused tetracyclic cage of 1a. Antimicrobial activities of (S,SP)- and (R,RP)-2b were tested against various Gram-positive and Gram-negative bacterial strains.

Co-reporter:Johannes Zagermann;Kathrin Klein;Klaus Merz;Mariusz Molon
European Journal of Inorganic Chemistry 2011 Volume 2011( Issue 27) pp:4212-4219
Publication Date(Web):
DOI:10.1002/ejic.201100433

Abstract

The mixed-ligand tris(pyrazolyl)borate sandwich compound [TpmRuTp′]Cl (2) was prepared by microwave-assisted synthesis from Tp′Ru(COD)Cl (1) [Tp = tris(pyrazolyl)borate; Tp′ = p-bromophenyltris(pyrazolyl)borate; Tpm = tris(pyrazolyl)methane; COD = 1,4-cyclooctadiene]. Subsequently, 2 was converted to the azide-functionalized [TpmRu(p-N3C6H4Tp)] (3), which can be readily coupled to biomolecules by Cu-catalyzed azide–alkyne cycloaddition (Cu-AAC) in solution, as exemplified by the covalent attachment to pentyne-functionalized HC(CH2)2–CO–Val–OtBu (4), and an alkyne derivative of the neuropeptide enkephaline HC(CH2)2–CO–ENK–OH (ENK = enkephaline, Tyr–Gly–Gly–Phe–Leu). The resulting triazole compounds [TpmRu({p-C2N3H–(CH2)2–CO–Val–OtBu}Tp)]Cl (5) and [TpmRu({p-C2N3H–(CH2)2–CO–ENK–OH}Tp)]Cl (6), represent the first [3+2] cycloaddition products of azide-functionalized Tp compounds. They were characterized by NMR spectroscopy and mass spectrometry. Furthermore, 1, 2, and 3 as well as the reaction intermediate [(κ2-N,N′-Tpm)RuCl(Tp′)] (2a) were characterized in the solid state by single-crystal X-ray diffraction.

Co-reporter:Gilles Gasser;Sebastian Neumann;Ingo Ott;Michael Seitz;Rolf Heumann
European Journal of Inorganic Chemistry 2011 Volume 2011( Issue 36) pp:5471-5478
Publication Date(Web):
DOI:10.1002/ejic.201100734

Abstract

Two peptide nucleic acid (PNA) oligomers containing two different organometallic moieties, namely derivatives of azidoferrocene (Fc-N3) and ferrocene carboxylic acid (Fc-COOH) for PNA5 and derivatives of β-cymantrenoylpropionic acid [Cym-CO(CH2)2COOH] and the rhenium bisquinoline tricarbonyl complex [Re(BQ-N3)(CO)3]Br for PNA6, have been prepared on a solid support by using two different synthetic methods: Peptide coupling and click chemistry. PNA5 and PNA6 were unambiguously characterized by ESI-MS or MALDI-TOF MS and their purity checked by LC–MS. As expected, the bioconjugate PNA6 presents two broad and strong absorption bands at 1933 and 2032 cm–1 in its IR spectrum due to the presence of six metal–carbonyl bonds. It has also been demonstrated that the presence of the Mn complex in PNA6 did not significantly alter the fluorescence properties of the Re complex in aqueous solution compared with a previously reported Re–PNA bioconjugate (PNA7). Photoexcitation of PNA6 at 350 nm reveals two distinct emission bands at about 434 and 595 nm in aqueous solutions. PNA6 was successfully electroporated into HeLa cells, as shown by high-resolution continuum-source atomic absorption spectroscopy, which was used to measure the concentrations of both Re and Mn. However, no fluorescence of the Re complex in PNA6 was observed in living cells, even at a concentration 20 times higher than that previously reported for PNA7.

Co-reporter:Lukasz Raszeja;Dr. Abdelouahid Maghnouj; Dr. Stephan Hahn; Dr. Nils Metzler-Nolte
ChemBioChem 2011 Volume 12( Issue 3) pp:371-376
Publication Date(Web):
DOI:10.1002/cbic.201000576

Abstract

Organometallic complexes possess great potential for imaging applications in biology, due to their kinetic stability and often favourable intrinsic properties. In this work we present a new class of ReI-tricarbonyl complexes with a substituted bis(phenanthridinylmethyl)amine (bpm) ligand. The complex Re(CO)3(R-bpm) could be conveniently prepared by microwave synthesis from [Re(CO)3(H2O)3]Br and a suitably substituted bis(phenanthridinylmethyl)amine (R-bpm). Complex 5, with R=CH2-CO2-CH3, was characterized by a single-crystal X-ray structure. Complex 6 (R=CH2-C6H4-CO2H) was used in solid-phase peptide synthesis (SPPS) to label the neurotensin(8–13) (NT) fragment N-terminally. The complexes show luminescence emission with large Stokes shifts (λex=350 nm, λem=570 nm). Cellular uptake and intracellular localization studies in several cell lines demonstrate the utility of the new Re(CO)3(R-bpm) complexes for fluorescence imaging and reveal significant differences between the simple methyl ester 5 and the NT bioconjugate 7.

Co-reporter:Jessica Lemke, Nils Metzler-Nolte
Journal of Organometallic Chemistry 2011 696(5) pp: 1018-1022
Publication Date(Web):
DOI:10.1016/j.jorganchem.2010.12.044
Co-reporter:Malay Patra, Gilles Gasser, Dmytro Bobukhov, Klaus Merz, Alexander V. Shtemenko and Nils Metzler-Nolte  
Dalton Transactions 2010 vol. 39(Issue 24) pp:5617-5619
Publication Date(Web):19 May 2010
DOI:10.1039/C003598J
In the view of developing a synthetic route for the controlled insertion of distinct organometallic moieties into peptide nucleic acid (PNA) oligomers, a proof-of-principle study of the chemoselective insertion of three different organometallics into a building block containing both a PNA backbone and an alkyne side-chain is presented in this study.
Co-reporter:Gilles Gasser, Katrin Jäger, Martin Zenker, Ralf Bergmann, Jörg Steinbach, Holger Stephan, Nils Metzler-Nolte
Journal of Inorganic Biochemistry 2010 Volume 104(Issue 11) pp:1133-1140
Publication Date(Web):November 2010
DOI:10.1016/j.jinorgbio.2010.06.011
A new azido derivative of 2,2′-dipicolylamine (Dpa), 2-azido-N,N-bis((pyridin-2-yl)methyl)ethanamine, (Dpa-N3) was readily prepared from the known 2-(bis(pyridin-2-ylmethyl)amino)ethanol (Dpa-OH). It was demonstrated that Dpa-N3 could be efficiently labeled with both [Re(CO)3(H2O)3]Br and [99mTc(H2O)3(CO)3]+ to give [Re(CO)3(Dpa-N3)]Br and [99mTc(CO)3(Dpa-N3)]+, respectively. Furthermore, Dpa-N3 was successfully coupled, on the solid phase, to a Peptide Nucleic Acid (PNA) oligomer (H-4-pentynoic acid-spacer-spacer-tgca-tgca-tgca-Lys-NH2; spacer = –NH–(CH2)2–O–(CH2)2–O–CH2–CO–) using the Cu(I)-catalyzed [2 + 3] azide/alkyne cycloaddition (Cu-AAC, often referred to as the prototypical “click” reaction) to give the Dpa-PNA oligomer. Subsequent labeling of Dpa-PNA with [99mTc(H2O)3(CO)3]+ afforded [99mTc(CO)3(Dpa-PNA)] in radiochemical yields > 90%. Partitioning experiments in a 1-octanol/water system were carried out to get more insight on the lipophilicity of [99mTc(CO)3(Dpa-N3)]+ and [99mTc(CO)3(Dpa-PNA)]. Both compounds were found rather hydrophilic (log Do/w values at pH = 7.4 are −0.50: [99mTc(CO)3(Dpa-N3)]+ and −0.85: [99mTc(CO)3(Dpa-PNA)]. Biodistribution studies of [99mTc(CO)3(Dpa-PNA)] in Wistar rats showed a very fast blood clearance (0.26 ± 0.1 SUV, 1 h p.i.) and modest accumulation in the kidneys (5.45 ± 0.45 SUV, 1 h p.i.). There was no significant activity in the thyroid and the stomach, demonstrating a high in vivo stability of the 99mTc-labeled Dpa-PNA conjugate.A new azido derivative of 2,2′-dipicolylamine (Dpa) was readily prepared and coupled to a PNA oligomer by solid phase synthesis. After radiolabeling with the 99mTc(CO)3 fragment, this conjugate was used for radiolabeling studies in mice.
Co-reporter:Malay Patra, Gilles Gasser, Michaela Wenzel, Klaus Merz, Julia E. Bandow, and Nils Metzler-Nolte
Organometallics 2010 Volume 29(Issue 19) pp:4312-4319
Publication Date(Web):September 9, 2010
DOI:10.1021/om100614c
The recent discovery of the natural product platensimycin (1) as a new antibiotic lead structure has triggered the synthesis of numerous organic derivatives for structure−activity relationships (SAR) in order to improve the poor in vivo efficacy of 1. The synthesis, characterization, and biological evaluation of the first four ferrocene-containing bioorganometallic compounds based on the platensimycin lead structure are reported herein, namely 3-(4,4-diferrocenoylpentanamido)-2,4-dihydroxybenzoic acid (2), 3-(4,4-diferrocenoylbutanamido)-2,4-dihydroxybenzoic acid (3), 3-{4-(acetylferrocenoyl)butanamido}-2,4-dihydroxybenzoic acid (4), and 3-(4-ferrocenoylbutanamido)-2,4-dihydroxybenzoic acid (5). All new compounds were unambiguously characterized by all common analytical methods, including 1H and 13C NMR, mass spectrometry, IR spectroscopy, and elemental analysis. Furthermore, the single-crystal X-ray structures of methyl 4,4-diferrocenoylbutanoate (9), methyl 4,4-diferrocenoylpentanoate (10), 4,4-diferrocenoylpentanoic acid (14), 4,4-diferrocenoylbutanoic acid (15), and 4-(acetylferrocenoyl)butanoic acid (16) were also determined. Among 2−5 and their intermediate carboxylic acids tested, only 3 was found to inhibit selectively the growth of S. aureus Mu50 strain (VISA) at a minimum inhibitory concentration (MIC) value of 128 μg/mL.
Co-reporter:Konrad Meister;Johanna Niesel;Ulrich Schatzschneider Dr. Dr.;DiedrichA. Schmidt Dr.;Martina Havenith Dr.
Angewandte Chemie International Edition 2010 Volume 49( Issue 19) pp:3310-3312
Publication Date(Web):
DOI:10.1002/anie.201000097
Co-reporter:Konrad Meister;Johanna Niesel;Ulrich Schatzschneider Dr. Dr.;DiedrichA. Schmidt Dr.;Martina Havenith Dr.
Angewandte Chemie International Edition 2010 Volume 49( Issue 19) pp:
Publication Date(Web):
DOI:10.1002/anie.201001495
Co-reporter:Gilles Gasser ; Merja A. Neukamm ; Alexandra Ewers ; Oliver Brosch ; Thomas Weyhermüller
Inorganic Chemistry 2009 Volume 48(Issue 7) pp:3157-3166
Publication Date(Web):March 5, 2009
DOI:10.1021/ic900013r
The reaction of Co2(CO)8 with alkyne-containing amino acids [1a: phenylalanine (Phe) and 1b: methionine (Met)], two suitably alkyne-functionalized derivatives of the neuropeptide enkephalin (Enk) [3: Ac-Enk-Prop and 5: Ac-Enk(Pgl)-NH2 (Ac - Acetyl; Pgl - propargylglycine; Prop - propargylamine)], a thymine Peptide Nucleic Acid (T-PNA) monomer (7), and a PNA-like monomer (9) derivative gave the respective dicobalthexacarbonyl bioconjugates in very good yields. Two different sites for labeling of the biomolecules were successfully used: The organometallic moiety was reacted with the C-terminus of alkyne-containing amino acids, peptide or PNA thymine monomers, and alternatively the organometallic compound was complexed to an internal site in the peptide or PNA. To this end, a simple glycine was replaced by propargylglycine in peptides, and a new alkyne-containing PNA-like monomer, in which an alkyne chain replaces the nucleobase, was used for PNA chemistry. For the synthesis of the two alkyne-containing enkephalin derivatives 3 and 5, two different resins, namely sulfamylbutyryl and Rink amid, were used as they allow to selectively insert, on the solid phase, an alkyne moiety at the C-terminus and on a side-chain of a peptide sequence, respectively. The identity and constitution of all cobalt complexes were confirmed by different analytical methods (IR, FAB, ESI-MS, and NMR). Most notably, IR spectroscopy shows intensive bands in the 2100−2000 cm−1 region because of the Co2(CO)6 moiety. In both 1H NMR spectra of the dicobalthexacarbonyl PNA monomer derivatives 8 and 10, all signals are doubled because of the cis-trans isomerism about the central amide bond. The X-ray structure of a dicobalthexacarbonyl phenylalanine derivative (2a) confirms the proposed composition of the bioconjugates and shows that, as anticipated, the alkyne group of 2a is no longer linear upon complexation in comparison to the alkyne group of the bioconjugate precursor 1a, as indicated by a C−C≡C angle of about 143° in 2a. Moreover, the C≡C bond of 1a was elongated by about 0.15 Å upon Co2 coordination.
Co-reporter:Jessica Lemke, Antonio Pinto, Philip Niehoff, Vera Vasylyeva and Nils Metzler-Nolte  
Dalton Transactions 2009 (Issue 35) pp:7063-7070
Publication Date(Web):16 Jul 2009
DOI:10.1039/B906140A
We report the synthesis of new NHC gold(I) and NHC gold(III) halide, amino acid and dipeptide complexes. Transmetallation of the N-phenylalanine-substituted NHC silver complex 3 with Me2SAuCl yields the phenylalanine–NHC gold(I) conjugate 4a. Halide exchange with LiBr and oxidation of 4a with Br2 in CH2Cl2 yields the phenylalanine–NHC Au(I) and Au(III) bromides 4b and 4c, respectively. Reaction of N-Boc protected cysteine methyl ester (Boc–Cys–OMe) or the dipeptideN-Boc–Leu–Cys–OMe with the NHC gold chloride 6a yields the (NHC)Au–S complexed amino acid and dipeptide derivatives 8 and 9. The NHC gold(III) complexes 4c and 6c were characterised by single crystal X-ray analysis. All of the tested gold carbene complexes showed significant anti-tumor activity on the HeLa, HepG2 and HT-29 cancer cell lines. The best compounds show activity comparable to the well-known anti-cancer drug cisplatin. There seems to be no clear cut structure–activity relationship in the compounds tested, nor did we observe a dependence on the metal oxidation state or the different halide substituents. Given the ease of preparation, stability and high activity of the compounds described herein, it may be possible to design tumor-specific anti-cancer agents based on NHC gold amino acid conjugates in the future.
Co-reporter:Gilles Gasser, Oliver Brosch, Alexandra Ewers, Thomas Weyhermüller and Nils Metzler-Nolte  
Dalton Transactions 2009 (Issue 22) pp:4310-4317
Publication Date(Web):09 Feb 2009
DOI:10.1039/B819169G
The rational, sequential synthesis of two hetero-bimetallic derivatives of the amino acid phenylalanine and one thymine (T) peptide nucleic acid (PNA) monomer is reported. Ferrocene carboxylic acid and (η-ethene)bis(triphenylphosphine)platinum(0) were successfully reacted with propargylamide amino acid (1a and 1b) or a T PNA monomer derivative (6) to give the expected three bimetallic compounds 4a, 4b and 9 in good yield. An enzymatic route using cross-linked enzyme crystals (CLEC) of subtilopeptidase A in organic solvents gave the ferrocene carboxylate phenylalanine propargylamide precursor (Fc-CO-Phe-NH-CH2-CCH, 3a) in comparable yield and purity to the traditional deprotection-peptide coupling sequence. 31P NMR spectra of these bioorganometallics showed two doublets with 195Pt satellites corresponding to two chemically different 31P atoms. Interestingly, in the case of the T PNA monomer derivative 9, these signals were also doubled in a 60 : 40 ratio as a consequence of the existence of two slowly interconverting isomers in solution. Furthermore, the single-crystal X-ray structures of 3a and the hetero-bimetallic phenylalanine derivative 4b were determined, showing the presence of the two organometallics moieties separated by ca. 8.5 Å in 4b as well as illustrating the stability of such compounds.
Co-reporter:Anna M. Sosniak, Gilles Gasser and Nils Metzler-Nolte  
Organic & Biomolecular Chemistry 2009 vol. 7(Issue 23) pp:4992-5000
Publication Date(Web):13 Oct 2009
DOI:10.1039/B913964H
The preparation of new metal-containing Peptide Nucleic Acids (PNAs) is currently a field of research intensively studied for various purposes, e.g.DNA biosensors. The role played by the metal centre, notably on the stability of the PNA·DNA hybrid, is obviously crucial, but has not yet been fully investigated. In this work, UV-Vis spectroscopic measurements of solutions of DNA·PNA hybrids, whose 11/12-mer PNA oligomers contained either one or two alkyne- (1) or ferrocene-containing (2) PNA monomers, were carried out to determine the effect of these monomers on the thermal stability of the hybrids (PNA: H-Gly-X-gggtc-Y-agctt-X-Lys-NH2 with X = 1 or 2 and Y = 1 or 2 or blank position). Supplementary CD spectroscopic measurements were performed to gain insight into the structures of the PNA·DNA duplexes formed. The effect of both modified monomers was found to depend on their actual positions within the PNA sequences. Insertions at the N- or C-termini of a PNA oligomer did not change the melting temperatures (Tm values of about 72 °C) of the DNA·PNA hybrids significantly. Insertion of monomers 1 or 2 in the middle of a PNA sequence induced a substantial decrease in the Tm of the hybrids (by about 23 °C) when bound to the same DNA oligomer. Interestingly, it was found that the type of modification, namely alkyne or ferrocene, did not significantly influence the Tm values in these cases. However, the thermal stability of hybrids with the DNA oligomers containing one to four additional thymines and the PNA oligomers containing the ferrocene moiety in its middle, varied significantly with the number of thymines added compared to its alkyne analogues (ΔTm up to −13 °C). The presence of the ferrocene moiety induced a significant decrease in thermal stability of the hybrids, probably due to its bulkiness. In order to assess the effect of PNA backbone rigidity on the stability of DNA·PNA hybrids, PNA oligomers with an internal amino acid, propargylglycine (Pgl) or the dipeptide glycine-propargylglycine (Gly-Pgl), were synthesised. It was assumed that the orientation of the alkyne moiety in the Pgl-containing PNA sequence is not identical to an alkyne-containing PNA sequence, as a significantly higher Tm value (ΔTm = +10 °C) was measured. It is anticipated that the alkyne moiety in Pgl is not facing the DNA base and therefore does not disturb as much the neighbouring nucleobases and base-stacking of the complementary DNA, in contrast to the alkyne moiety of 1. Interestingly, no significant differences in the thermal stability of the hybrids was observed between Pgl-containing and dipeptide-containing PNA oligomers, although the former contracts the PNA backbone by three atoms.
Co-reporter:Johannes Zagermann;Matthew C. Kuchta;Klaus Merz
European Journal of Inorganic Chemistry 2009 Volume 2009( Issue 35) pp:5407-5412
Publication Date(Web):
DOI:10.1002/ejic.200900707

Abstract

In the course of finding ligands suitable for application in bioorganometallic systems, “third-generation” Tp-transfer agents p-BrC6H4TpM [M = Na (1), K (2), Rb (3), Cs (4), Tl (5); Tp = tris(pyrazolyl)borate], p-BrC6H4Tp*Tl (6) [Tp* = tris(3,5-dimethylpyrazolyl)borate], (p-BrC6H4Tp)2Mg (7), p-BrC6H4TpMeK (8) [TpMe = tris(3-methylpyrazolyl)borate] and p-BrC6H4Tp*K (9) bearing a functionalizable 4-bromophenyl group on the boron atom were synthesized and characterized. Monovalent 6 and magnesium-sandwich compound 7 were structurally characterized in the solid state by X-ray diffraction. Compound 6 forms a dimer by κ2-coordination of Tl to one Tp ligand and to the bromine atom of a neighbouring 4-bromophenyl group.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2009)

Co-reporter:Srećko I. Kirin, Ulrich Schatzschneider, S. David Köster, Daniel Siebler, Nils Metzler-Nolte
Inorganica Chimica Acta 2009 Volume 362(Issue 3) pp:894-906
Publication Date(Web):20 February 2009
DOI:10.1016/j.ica.2008.01.050
The synthesis and spectroscopic characterization of 21 l,l′-disubstituted ferrocenoyl peptides of the general formula [Fe(C5H4-CO-Aal-OR) (C5H4-CO-Aa2-OR′)] is reported, with Aal and Aa2 being different amino acids. The one-pot synthesis from activated ferrocene-l,l′-dicarboxylic acid and two different amino acid esters gives the unsymmetrical ferrocenoyl peptides in yields between 27% and 42%, which can be easily separated from their symmetrical byproducts by column chromatography. All new compounds are comprehensively characterized by mass spectrometry (El and FAB, including high-resolution EI-MS), 1H and 13C NMR, and UV/Vis spectroscopy. CD spectroscopy in conjunction with 1H NMR is used to elucidate the solution structures. Using the achiral glycine (Gly) as Aal permits to determine qualitatively the structure-determining influence of the different amino acids Aa2. Helically chiral structures in ferrocene amino acids in this study are stabilized by hydrogen bonds. If one hydrogen bond partner is systematically moved away by the introduction of methylene groups, then indeed the strength of the hydrogen bond decreases as indicated by 1H NMR chemical shifts of the amide protons and the strength of characteristic CD bands. As proline (Pro) is the only naturally accuring secondary amino acid it cannot contribute any amide proton to intra-strand hydrogen bonding. DFT calculations on the compound [Fe(C5H4-CO-Gly-OMe)(C5H4-CO-Pro-OMe)] with one achiral and one secondary amino acid were therefore performed to quantify the more subtle influence of the relative orientations of the ferrocene carbonyl groups and the cis-/trans-conformation of both amide bonds. Not unexpectedly, the conformations with both amide bonds in cis orientation are highest in energy. Surprisingly, the calculations suggest the presence of a low-energy conformation with a non-classical hydrogen bond between the proline ester carbonyl oxygen and a glycine Hα atom. However, a second conformation with no apparent intra-strand contacts but optimal positioning of all relevant groups is similar in energy. Although two conformations were observed in solution for this compound, the experimental data did not permit to assign those two conformations.The unsymmetrical organometallic peptides 1–12 are prepared in a one-pot procedure, starting from ferrocene diacid and two different amino acids. They are easily separated from the symmetrical byproducts and isolated in 27–42% yield. Their H-bonding dominated secondary structures are studied by 1H NMR, CD and DFT methods.
Co-reporter:Malay Patra;Gilles Gasser Dr.;Antonio Pinto;Klaus Merz Dr.;Ingo Ott Dr.;JuliaE. Bow Dr. Dr.
ChemMedChem 2009 Volume 4( Issue 11) pp:1930-1938
Publication Date(Web):
DOI:10.1002/cmdc.200900347

Abstract

The recent discovery of the natural product platensimycin as a new antibiotic lead structure has triggered the synthesis of numerous organic derivatives for structure–activity relationship studies. Herein, we describe the synthesis, characterization and biological evaluation of the first organometallic antibiotic inspired by platensimycin. Two bioorganometallic compounds containing (η6-pentamethylbenzene)Cr(CO)3 (2) and (η6-benzene)Cr(CO)3 (3), linked by an amide bond to the aromatic part of platensimycin, were synthesized. Their antibiotic activities were tested against B. subtilis 168 (Gram positive) and E. coli W3110 (Gram negative) bacterial strains. Both compounds were found to be inactive against E. coli but derivative 2 inhibits B. subtilis growth at a moderate MIC value of 0.15 mM. To test the intrinsic toxicity of chromium, several chromium salts along with {η6-(3-pentamethylphenyl propionic acid)}Cr(CO)3 (5) and {η6-(3-phenyl propionic acid)}Cr(CO)3 (6) were tested against both bacterial strains. No activity was observed against E. coli for any of the compounds; B. subtilis growth was not inhibited by Cr(NO3)3 and only very weakly by 5, K2Cr2O7 and Na2CrO4 at MIC values of 0.5, 0.68 and 1.24 mM, respectively. Compounds 2, 3, 5 and 4 (the pure organic analogue of 2) show similar cytotoxicity against HeLa, HepG2 and HT-29 mammalian cell lines. Furthermore, the cellular uptake and the intracellular distribution of compounds 2, 3 and Cr(NO3)3 in B. subtilis were studied using atomic absorption spectroscopy to gain insight in to the possible cellular targets. Compound 2 was found to be readily taken up and distributed almost equally among cytosol, cell debris and cell membrane in B. subtilis.

Co-reporter:Johannes Zagermann, Matthew C. Kuchta, Klaus Merz, Nils Metzler-Nolte
Journal of Organometallic Chemistry 2009 694(6) pp: 862-867
Publication Date(Web):
DOI:10.1016/j.jorganchem.2008.09.023
Co-reporter:Johannes Zagermann, Klaus Merz and Nils Metzler-Nolte
Organometallics 2009 Volume 28(Issue 17) pp:5090-5095
Publication Date(Web):August 13, 2009
DOI:10.1021/om9002297
Two different seven-coordinate iodocarbonyltungsten complexes incorporating tris(pyrazolyl)borate ligands and η2-coordinated functionalized alkynes have been synthesized and characterized. [Tp*WI(CO)(η2-HCC(CH2)2CO2H)] (1), which has been characterized in the solid state by X-ray diffraction, was readily coupled to the hexa- and pentapeptides pseudo-neurotensin(8-13) and enkephalin in solid phase peptide synthesis (SPPS) to provide the N-terminal-labeled bioconjugates [Tp*WI(CO)(η2-HCC(CH2)2CO-NH-Lys-Lys-Pro-Tyr-Ile-Leu-OH)] (3) and [Tp*WI(CO)(η2-HCC(CH2)2CO-NH-Tyr-Gly-Gly-Phe-Leu-OH)] (4), respectively. [Tp*WI(CO)(η2-Fmoc-Pgl-OH)] (2, Pgl = propargylglycine) was utilized to synthesize the side-chain-labeled enkephalin derivative H2N-Tyr-Gly-[Tp*W(I)(CO)(η2-Pgl)]-Phe-Leu-OH (5). All new bioconjugates were comprehensively charaterized by HPLC, mass spectrometry, and multinuclear 1D and 2D spectroscopy. Their characteristic metal carbonyl IR band just over 1900 cm−1 and good stability against air and water make these Tp*W alkyne complexes valuable labels for biomolecules.
Co-reporter:Julia E. Bow Jun.- Dr. Dr.
ChemBioChem 2009 Volume 10( Issue 18) pp:2847-2850
Publication Date(Web):
DOI:10.1002/cbic.200900628
Co-reporter:Gilles Gasser, Nina Hüsken, S. David Köster and Nils Metzler-Nolte  
Chemical Communications 2008 (Issue 31) pp:3675-3677
Publication Date(Web):10 Jun 2008
DOI:10.1039/B805369C
The facile side-specific insertion, on the solid phase, of one or two ferrocene moieties into peptide nucleic acid (PNA) oligomers by click chemistry is presented.
Co-reporter:Merja A. Neukamm, Antonio Pinto and Nils Metzler-Nolte  
Chemical Communications 2008 (Issue 2) pp:232-234
Publication Date(Web):22 Oct 2007
DOI:10.1039/B712886J
A solid-phase synthesized propargyl derivative of the neuropeptide leucine-enkephalin (Enk) reacts rapidly and quantitatively with Co2(CO)8 to give the Co2(CO)6–alkyne labeled peptide 2, which is the first organometallic peptide bioconjugate to show significant toxicity against two different tumor cell lines.
Co-reporter:Jessica Lemke
European Journal of Inorganic Chemistry 2008 Volume 2008( Issue 21) pp:3359-3366
Publication Date(Web):
DOI:10.1002/ejic.200800366

Abstract

While N-heterocyclic carbenes (NHCs) are ubiquitous ligands in catalysts for organic or industrial synthesis, their potential to form stable transition metal complexes has hardly been exploited in metal bioconjugates. In this work, we describe a straightforward synthesis of carboxylato-functionalized imidazolium salts for covalent binding to peptides. Carbene complexes of Ru and Rh were prepared from these imidazolium salts using Ag2O, followed by transmetallation. The neuropeptide [Leu5]-enkephalin (Tyr-Gly-Gly-Phe-Leu) was chosen as a model peptide. Exploratory NMR experiments identified the Ru(p-cymene)Cl2 complex of the asymmetrically substituted imidazol-2-ylidene 3b as the most suitable metal carbene precursor for solid phase peptide synthesis (SPPS). After optimization of the conditions for SPPS, a ruthenium-NHC pseudoenkephalin (dichloro(η6-p-cymene)[1-methyl-3-(methyl-p-benzoyl-Gly-Gly-Phe-Leu-OH)imidazol-2-ylidene]ruthenium(II), 12) was synthesized from 3b on solid phase using the 2-Cl-Trt resin and cleavage by 2 % TFA to yield the free carboxylic acid. Peptide 12 was fully characterized by HPLC, 1H and 13C NMR and ESI-MS. Characteristic NMR signals, as well as the isotope pattern of Ru in the ESI-MS, unequivocally confirm the formation of this metal-carbene peptide bioconjugate.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2008)

Co-reporter:Xavier de Hatten;Eberhardt Bothe;Klaus Merz;Ivan Huc
European Journal of Inorganic Chemistry 2008 Volume 2008( Issue 29) pp:4530-4537
Publication Date(Web):
DOI:10.1002/ejic.200800566

Abstract

This work introduces a bis(cysteine) ligand to build a small peptidic model system of hydrogenase enzymes. Fe(C5H4CO–Cys–OMe)2 (LH2) has been employed as a chelate for an iron–carbonyl complex, which mimics two essential structural properties of the hydrogenase class of enzymes, namely the coordination of the iron–carbonyl core to peptide ligands and the presence of an electrochemical relay in spatial proximity. The treatment of LH2 with Fe3(CO)12 yields LFe2(CO)6 (3a), which is the first peptide-coordinated iron hydrogenase active-site model complex. Compound 3a was fully characterized spectroscopically (1H NMR, 13C NMR, IR and Mössbauer spectroscopy, mass spectrometry and elemental analysis). A single-crystal X-ray analysis confirms the proposed structure and reveals a staggered conformation of the Fe2(CO)6S2 core. Fourier transform infrared (FTIR) spectroelectrochemistry reveals an electronic interaction between the peptide backbone and the iron–carbonyl cluster, but not with the ferrocene subsite. The introduction of this peptidic cysteine-based ligand into hydrogenase model chemistry helps to confirm the proposed cofactor biosynthesis and understand the electronic interplay between the metal–carbonyl active site and the protein environment in this important class of enzymes.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2008)

Co-reporter:S. David Köster, Jan Dittrich, Gilles Gasser, Nina Hüsken, Isabel C. Henao Castañeda, Jorge L. Jios, Carlos O. Della Védova and Nils Metzler-Nolte
Organometallics 2008 Volume 27(Issue 23) pp:6326-6332
Publication Date(Web):November 5, 2008
DOI:10.1021/om800639m
Ferrocenyl triazole amino acid (l-leucine methyl ester (2, 5), l-phenylalanine methyl ester (3, 7), l-alanine methyl ester (4), l-valine tert-butyl ester (6), l-proline methyl ester (8)) and peptide derivatives ([Leu5]-enkephalin (9, 10)) were prepared by Cu(I)-catalyzed [3+2] cycloaddition of azidoferrocene and 1,1′-diazidoferrocene with the corresponding alkyne-modified amino acids and peptide. A purity of >95% for the peptide conjugates was confirmed by HPLC. All new compounds were comprehensively characterized by elemental analysis, mass spectrometry (FAB and ESI-MS, including high-resolution MS), IR, and multinuclear 1D and 2D NMR spectroscopy. Solution structures were studied by circular dichroism (CD) and NMR spectroscopy, showing that compounds 5, 6, and 7 form intramolecular hydrogen bonds (IHBs) in noncoordinating solvents. Electrochemical studies show reversible processes of the redox couple Fc0/Fc+ (Fc = ferrocenyl) for compounds 2−9, whereas compound 10 exhibits an irreversible oxidation. A good correlation between the diffusion coefficients as determined by electrochemical methods and the molecular weight was established.
Co-reporter:Xavier de Hatten Dr.;Zoe Cournia Dr.;Ivan Huc Dr.;Jeremy C. Smith  Dr.  Dr.
Chemistry - A European Journal 2007 Volume 13(Issue 29) pp:
Publication Date(Web):31 AUG 2007
DOI:10.1002/chem.200700358

The increasing importance of hydrogenase enzymes in the new energy research field has led us to examine the structure and dynamics of potential hydrogenase mimics, based on a ferrocene–peptide scaffold, using molecular dynamics (MD) simulations. To enable this MD study, a molecular mechanics force field for ferrocene-bearing peptides was developed and implemented in the CHARMM simulation package, thus extending the usefulness of the package into peptide–bioorganometallic chemistry. Using the automated frequency-matching method (AFMM), optimized intramolecular force-field parameters were generated through quantum chemical reference normal modes. The partial charges for ferrocene were derived by fitting point charges to quantum-chemically computed electrostatic potentials. The force field was tested against experimental X-ray crystal structures of dipeptide derivatives of ferrocene-1,1′-dicarboxylic acid. The calculations reproduce accurately the molecular geometries, including the characteristic C2-symmetrical intramolecular hydrogen-bonding pattern, that were stable over 0.1 μs MD simulations. The crystal packing properties of ferrocene-1-(D)alanine-(D)proline-1′-(D)alanine-(D)proline were also accurately reproduced. The lattice parameters of this crystal were conserved during a 0.1 μs MD simulation and match the experimental values almost exactly. Simulations of the peptides in dichloromethane are also in good agreement with experimental NMR and circular dichroism (CD) data in solution. The developed force field was used to perform MD simulations on novel, as yet unsynthesized peptide fragments that surround the active site of [Ni–Fe] hydrogenase. The results of this simulation lead us to propose an improved design for synthetic peptide-based hydrogenase models. The presented MD simulation results of metallocenes thereby provide a convincing validation of our proposal to use ferrocene–peptides as minimal enzyme mimics.

Co-reporter:Lidija Barišić;Vladimir Rapić
European Journal of Inorganic Chemistry 2006 Volume 2006(Issue 20) pp:
Publication Date(Web):5 SEP 2006
DOI:10.1002/ejic.200600534

The organometallic amino acid 1′-aminoferrocene-1-carboxylic acid (Fca) was incorporated internally into a peptide sequence by solid-phase methods combining natural Fmoc-protected amino acids and Boc-Fca-OH to give the pentapeptide Boc-Fca-Ala-Gly-Val-Leu-NH2 (2) and the octapeptide Ac-Val-Gly-Ala-Fca-Ala-Gly-Val-Leu-NH2 (3). Compound 3 was found to have a helically ordered structure by NMR and CD spectroscopy, which is stabilized by intramolecular hydrogen bonding in an antiparallel β-sheet-like arrangement. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2006)

Co-reporter:Lidija Barišić Dr.;Mojca Čakić;Khaled A. Mahmoud;You-nian Liu Dr.;Heinz-Bernhard Kraatz Dr.;Hans Pritzkow Dr.;Srećko I. Kirin Dr. Dr.;Vladimir Rapić Dr.
Chemistry - A European Journal 2006 Volume 12(Issue 19) pp:
Publication Date(Web):24 MAY 2006
DOI:10.1002/chem.200600156

We present a detailed structural study of peptide derivatives of 1′-aminoferrocene-1-carboxylic acid (ferrocene amino acid, Fca), one of the simplest organometallic amino acids. Fca was incorporated into di- to pentapeptides with D- and L-alanine residues attached to either the carboxy or amino group, or to both. Crystallographic and spectroscopic studies (circular dicroism (CD), IR, and NMR) of about two dozen compounds were used to gain a detailed insight into their structures in the solid state as well as in solution. Four derivatives were characterized by single-crystal X-ray analysis, namely Boc-Fca-Ala-OMe (16), Boc-Fca-D-Ala-OMe (17), Boc-Fca-β-Ala-OMe (18), and Boc-Ala-Fca-Ala-Ala-OMe (21) (Boc=tert-butyloxycarbamyl). CD spectroscopy is an extremely useful tool to elucidate the helical chirality of the metallocene core. Unlike in all other known ferrocene peptides, the helical chirality of the ferrocene is governed solely by the chirality of the amino acid attached to the N terminus of Fca. Depending on the degree of substitution of both cyclopentadiene (Cp) rings, different hydrogen-bonding patterns are realized. 1H NMR and IR spectroscopy, together with the results from X-ray crystallography, give detailed information regarding not only the hydrogen-bonding patterns of the compounds, but also the equilibria between different conformers in solution. Differences in chemical shifts of NH protons in dimethyl sulfoxide ([D6]DMSO) and CDCl3, that is, the variation ratio (vr), is used for the first time as a measure of the hydrogen-bonding strength of individual CO⋅⋅⋅HN bonds in ferrocenoyl peptides. In dipeptides with one intramolecular hydrogen bond between the pendant chains, for example, in dipeptide 16, an equilibrium between hydrogen-bonded and open forms is observed, as testified by a vr value of around 0.5. Higher peptides, such as tetrapeptide 21, are able to form two intramolecular hydrogen bonds stabilizing one single conformation in CDCl3 solution (vr≈0). Due to the low barrier of Cp-ring rotation, new and unnatural hydrogen-bonding patterns are emerging. The systematic work described herein lays a solid foundation for the rational design of metallocene peptides with unusual structures and properties.

Co-reporter:Janine T. Chantson Dr.;Maria Vittoria Verga Falzacappa Dr.;Sergio Crovella  Dr.  Dr.
ChemMedChem 2006 Volume 1(Issue 11) pp:
Publication Date(Web):27 SEP 2006
DOI:10.1002/cmdc.200600117

This work shows how the introduction of an organometallic group enhances and modifies the specificity of biologically active peptides. Ferrocene was chosen as an organometallic group because it has been shown to alter the pharmacodynamic profile of bioactive compounds. A comparison with the isosteric cobaltocenium group allows one to explore the influence of charge and redox potential on the biological activity of the conjugates. Arginine and tryptophan containing peptides H-WRWRWR-NH2 and H-RWRWRW-NH2 and the metallocene peptide bioconjugates [M]-C(O)-RWRWR-NH2 and [M]-C(O)-WRWRW-NH2, where [M]=[Co(Cp)(C5H4)]+, [Fe(Cp)(C5H4)] were prepared by solid-phase peptide synthesis (SPPS). They were purified by HPLC, characterized by ESIMS and NMR spectroscopy, and tested for antibacterial properties against Escherichia coli, Pseudomonas aeruginosa, and Staphylococcus aureus using the minimum inhibitory concentration (MIC) test. In most cases, no metal-specific activity could be observed. However, the conjugate [Fe(Cp)(C5H4)-C(O)-WRWRW-NH2] 6 was found to be particularly effective against the Gram-positive S. aureus. The activity of this metallocene–pentapeptide conjugate (7.1 μM) was even better than the 20 amino acid naturally occurring pilosulin 2, which was used as a positive control. Unlike all other compounds tested, which were most active against the Gram-negative E. coli strain, the ferrocene conjugate 6 was the only compound in this series that was most active against Gram-positive bacteria. Given the health concerns resulting from multidrug resistant S. aureus strains, the incorporation of metallocenes may provide a novel line of attack.

Co-reporter:Malay Patra, Gilles Gasser, Dmytro Bobukhov, Klaus Merz, Alexander V. Shtemenko and Nils Metzler-Nolte
Dalton Transactions 2010 - vol. 39(Issue 24) pp:NaN5619-5619
Publication Date(Web):2010/05/19
DOI:10.1039/C003598J
In the view of developing a synthetic route for the controlled insertion of distinct organometallic moieties into peptide nucleic acid (PNA) oligomers, a proof-of-principle study of the chemoselective insertion of three different organometallics into a building block containing both a PNA backbone and an alkyne side-chain is presented in this study.
Co-reporter:Gilles Gasser, Oliver Brosch, Alexandra Ewers, Thomas Weyhermüller and Nils Metzler-Nolte
Dalton Transactions 2009(Issue 22) pp:NaN4317-4317
Publication Date(Web):2009/02/09
DOI:10.1039/B819169G
The rational, sequential synthesis of two hetero-bimetallic derivatives of the amino acid phenylalanine and one thymine (T) peptide nucleic acid (PNA) monomer is reported. Ferrocene carboxylic acid and (η-ethene)bis(triphenylphosphine)platinum(0) were successfully reacted with propargylamide amino acid (1a and 1b) or a T PNA monomer derivative (6) to give the expected three bimetallic compounds 4a, 4b and 9 in good yield. An enzymatic route using cross-linked enzyme crystals (CLEC) of subtilopeptidase A in organic solvents gave the ferrocene carboxylate phenylalanine propargylamide precursor (Fc-CO-Phe-NH-CH2-CCH, 3a) in comparable yield and purity to the traditional deprotection-peptide coupling sequence. 31P NMR spectra of these bioorganometallics showed two doublets with 195Pt satellites corresponding to two chemically different 31P atoms. Interestingly, in the case of the T PNA monomer derivative 9, these signals were also doubled in a 60 : 40 ratio as a consequence of the existence of two slowly interconverting isomers in solution. Furthermore, the single-crystal X-ray structures of 3a and the hetero-bimetallic phenylalanine derivative 4b were determined, showing the presence of the two organometallics moieties separated by ca. 8.5 Å in 4b as well as illustrating the stability of such compounds.
Co-reporter:Gilles Gasser, Anna M. Sosniak and Nils Metzler-Nolte
Dalton Transactions 2011 - vol. 40(Issue 27) pp:NaN7076-7076
Publication Date(Web):2011/05/03
DOI:10.1039/C0DT01706J
Peptide Nucleic Acids (PNAs) are non-natural DNA/RNA analogues with favourable physico-chemical properties and promising applications. Discovered nearly 20 years ago, PNAs have recently re-gained quite a lot of attention. In this Perspective article, we discuss the latest advances on the preparation and utilisation of PNA monomers and oligomers containing metal complexes. These metal- conjugates have found applications in various research fields such as in the sequence-specific detection of nucleic acids, in the hydrolysis of nucleic acids and peptides, as radioactive probes or as modulators of PNA˙DNA hybrid stability, and last but not least as probes for molecular and cell biology.
Co-reporter:Gilles Gasser, Antonio Pinto, Sebastian Neumann, Anna M. Sosniak, Michael Seitz, Klaus Merz, Rolf Heumann and Nils Metzler-Nolte
Dalton Transactions 2012 - vol. 41(Issue 8) pp:NaN2313-2313
Publication Date(Web):2011/12/20
DOI:10.1039/C2DT12114J
A new rhenium tricarbonyl complex of a bis(quinoline)-derived ligand (2-azido-N,N-bis((quinolin-2-yl)methyl)ethanamine, L–N3), namely [Re(CO)3(L–N3)]Br was synthesized and characterized in-depth, including by X-ray crystallography. [Re(CO)3(L–N3)]Br exhibits a strong UV absorbance in the range 300–400 nm with a maximum at 322 nm, and upon photoexcitation, shows two distinct emission bands at about 430 and 560 nm in various solvents (water, ethylene glycol). [Re(CO)3(L–N3)]Br could be conjugated, on a solid phase, to a peptide nucleic acid (PNA) oligomer using the copper(I)-catalyzed azide–alkyne cycloaddition reaction (Cu–AAC, “click” chemistry) and an alkyne-containing PNA building block to give Re–PNA. It was demonstrated that upon hybridisation with a complementary DNA strand (DNA), the position of the maxima and emission intensity for the hybrid Re–PNA·DNA remained mainly unchanged compared to those of the single strand Re–PNA. The rhenium-containing PNA oligomer Re–PNA could be then mediated in living cells where they have been shown to be non-toxic contrary to the general notion that organometallic compounds are usually unstable under physiological conditions and/or cytotoxic. Furthermore, Re–PNA could be detected in living cells using fluorescent microscopy.
Co-reporter:Malay Patra, Klaus Merz and Nils Metzler-Nolte
Dalton Transactions 2012 - vol. 41(Issue 1) pp:NaN117-117
Publication Date(Web):2011/11/10
DOI:10.1039/C1DT10918A
With more and more organometallic compounds receiving attention for applications in medicinal organometallic chemistry, the need arises for stereoselective syntheses of more complicated structures containing organometallic moieties, for example as isosteric substitutes for organic drug candidates. Herein, the synthesis and characterization of both diastereomers of a planar chiral (η6-arene)Cr(CO)3 containing carboxylic acid derivative, namely, 3-{η6-(1, 2, 3, 4-tetrahydro-1-endo/exo-methyl-2-oxonaphthalen-1-yl)-tricarbonylchromium(0)}propanoic acid (7 and 8) is reported. The molecular structures of both were confirmed by single crystal X-ray diffraction. The degree of diastereoselectivity in Cr(CO)3 complexation with methyl/tert-butyl-3-(1,2,3,4-tetrahydro-1-methyl-2-oxonaphthalen-1-yl)propanoate (4a/4b) vs. the Michael addition of methyl/tert-butyl acrylate to (η6-1-methyl-2-tetralone)Cr(CO)3 (9) was also examined. In the latter case the alkylation was found to be completely diastereoselective and gave methyl/tert-butyl-3-{η6-(1, 2, 3, 4-tetrahydro-1-endo-methyl-2-oxonaphthalen-1-yl)-tricarbonylchromium (0)}propanoate (5a and 5b) in excellent yield. Both the carboxylic acids 7 and 8 were coupled with the aminoresorcyclic acid core to achieve diastereomeric bioorganometallics 15a and 15b based on the naturally occurring antibioticplatensimycin lead structure (1a, see Fig. 1). The newly synthesized bioorganometallics were tested against various Gram-positive and Gram-negative bacterial strains but show no promising antibacterial activity.
Co-reporter:Florian Wieberneit, Annika Korste, H. Bauke Albada, Nils Metzler-Nolte and Raphael Stoll
Dalton Transactions 2013 - vol. 42(Issue 27) pp:NaN9802-9802
Publication Date(Web):2013/03/22
DOI:10.1039/C3DT50635E
Binding of Leu-enkephalin and [RhIII(η5-Cp*)(η6-Tyr1)]Leu-enkephalin to the recently published crystal structures of the μ- and δ-opioid receptor is studied. Docking of free Leu-enkephalin reveals two preferred conformations, one of which suggests an alternative binding site for the tyrosine residue. Furthermore, the three-dimensional solution structure of [RhIII(η5-Cp*)(η6-Tyr1)]Leu-enkephalin was solved by using 2D NMR spectroscopic techniques.
Co-reporter:S. David Köster, Hamed Alborzinia, Suzan Can, Igor Kitanovic, Stefan Wölfl, Riccardo Rubbiani, Ingo Ott, Phillip Riesterer, Aram Prokop, Klaus Merz and Nils Metzler-Nolte
Chemical Science (2010-Present) 2012 - vol. 3(Issue 6) pp:NaN2072-2072
Publication Date(Web):2012/04/12
DOI:10.1039/C2SC01127A
Solid-phase peptide synthesis (SPPS) is a versatile technique for the assembly of small to medium size peptides, that can help in the delivery of bound metal complexes to certain cellular compartments, for example in cancer cells. This work shows a new route to gold-peptide bioconjugates via a non-catalyzed [3 + 2] cycloaddition reaction of gold azides with alkynyl peptides. Gold(I) tetrapeptide conjugates with a mitochondria-targeting sequence were synthesized and display prolonged stability in the presence of thiol-containing biological media. Their antiproliferative potency against selected cancer cells (2–50 μM) corresponds to the lipophilicity of the conjugates. The cellular uptake of Au, determined by atomic absorption spectroscopy (AAS), shows that high initial uptake equals strong cytotoxicity. Respiration and acidification rates react immediately upon treatment with the Au-peptide conjugates, and a terminal breakdown of essential cellular functions is complete within ca. 12 h at most, as observed by online monitoring of the cancer cell metabolism in a microfluidic biosensor device (Bionas sensorchip system). The mode of action of these Au-peptide bioconjugates was elucidated by a variety of biochemical and cell biological experiments. First, a strong selective inhibition of the enzyme thioredoxin reductase (TrxR), a regulator of cellular redox processes, was found. In this context, elevated levels of reactive oxygen species (ROS) and strong effects on the respiration of isolated mouse liver mitochondria were found. These finally lead to cell death via apoptotic pathways, as indicated by flow cytometry, low mitochondrial membrane potential (MMP) and DNA fragmentation. Intriguingly, cisplatin-resistance in p53-mutant MDA-MB231 breast cancer cells could be overcome by the Au-peptide conjugates presented herein.
Co-reporter:Merja A. Neukamm, Antonio Pinto and Nils Metzler-Nolte
Chemical Communications 2008(Issue 2) pp:NaN234-234
Publication Date(Web):2007/10/22
DOI:10.1039/B712886J
A solid-phase synthesized propargyl derivative of the neuropeptide leucine-enkephalin (Enk) reacts rapidly and quantitatively with Co2(CO)8 to give the Co2(CO)6–alkyne labeled peptide 2, which is the first organometallic peptide bioconjugate to show significant toxicity against two different tumor cell lines.
Co-reporter:Y. Gothe, T. Marzo, L. Messori and N. Metzler-Nolte
Chemical Communications 2015 - vol. 51(Issue 15) pp:NaN3153-3153
Publication Date(Web):2015/01/21
DOI:10.1039/C4CC10014J
A new NHC iridium(I) complex (1) showing significant antiproliferative properties in vitro is described here. Its crystal structure, solution behaviour and interactions with the model proteins cytochrome c (cyt c) and lysozyme were investigated. High resolution ESI-MS measurements suggest that this iridium(I) complex acts as a prodrug and binds cyt c tightly through an unusual “oxidative” mechanism. Eventually, an iridium(III)–NHC fragment is found associated to the protein.
Co-reporter:Lukasz J. Raszeja, Daniel Siegmund, Anna L. Cordes, Jörn Güldenhaupt, Klaus Gerwert, Stephan Hahn and Nils Metzler-Nolte
Chemical Communications 2017 - vol. 53(Issue 5) pp:NaN908-908
Publication Date(Web):2016/12/23
DOI:10.1039/C6CC07553C
The synthesis and photophysical properties of a novel series of rhenium tricarbonyl complexes based on tridentate phenanthridinyl-containing ligands are described. Photophysical data reveal beneficial luminescence behaviour especially for compounds with an asymmetric ligand set. These advantageous properties are not limited to organic solvents, but indeed also improved in aqueous solutions. The suitability of our new rhenium complexes as potent imaging agents has been confirmed by fluorescence microscopy on living cancer cells, which also confirms superior long-time stability under fluorescence microscopy conditions. Colocalisation studies with commercial organelle stains reveal an accumulation of the complexes in the endoplasmic reticulum for all tested cell lines.
Co-reporter:Malay Patra and Nils Metzler-Nolte
Chemical Communications 2011 - vol. 47(Issue 41) pp:NaN11446-11446
Publication Date(Web):2011/09/21
DOI:10.1039/C1CC14537A
A convenient synthesis of azidomethyl-ruthenocene and its use in the covalent labelling of amino acids, peptides and a peptide nucleic acid (PNA) monomer derivative by Cu(I) catalyzed azide–alkyne coupling (Cu-AAC, “click chemistry”) are described.
Co-reporter:Gilles Gasser, Nina Hüsken, S. David Köster and Nils Metzler-Nolte
Chemical Communications 2008(Issue 31) pp:NaN3677-3677
Publication Date(Web):2008/06/10
DOI:10.1039/B805369C
The facile side-specific insertion, on the solid phase, of one or two ferrocene moieties into peptide nucleic acid (PNA) oligomers by click chemistry is presented.
Co-reporter:Malay Patra, Michaela Wenzel, Pascal Prochnow, Vanessa Pierroz, Gilles Gasser, Julia E. Bandow and Nils Metzler-Nolte
Chemical Science (2010-Present) 2015 - vol. 6(Issue 1) pp:NaN224-224
Publication Date(Web):2014/10/13
DOI:10.1039/C4SC02709D
The worrying appearance of microbial resistance to antibiotics is a worldwide problem which needs to be tackled urgently. Microbial resistance to the common classes of antibiotics involving purely organic compounds unfortunately develops very rapidly and in most cases, resistance was detected soon after or even before release of the antibiotic to the market. Therefore, novel concepts for antibiotics must be investigated, and metal-containing compounds hold particular promise in that area. Taking a trimetallic complex (1a) which contains a ferrocenyl (Fc), a CpMn(CO)3 (cymantrene) and a [(dpa)Re(CO)3] residue as the lead structure, a systematic structure–activity relationship (SAR) study against various gram-positive pathogenic bacteria including methicillin-resistant Staphylococcus aureus (MRSA) strains was performed. The [(dpa)Re(CO)3] moiety was discovered to be the essential unit for the observed antibacterial activity of 1a. The ferrocenyl and CpMn(CO)3 units can be replaced one by one or both together by organic moieties such as a phenyl ring without loss of antibacterial activity. The most potent mono-metallic complex (9c′) has an antibacterial activity comparable to the well-established organic drugs amoxicillin and norfloxacin and importantly, only moderate cytotoxicity against mammalian cells. Microbiological studies on membrane potential, membrane permeabilization, and cell wall integrity revealed that 9c′ targets the bacterial membrane and disturbs cell wall integrity, but shows more efficient membrane permeabilization than the lead structure 1a.
Co-reporter:H. Bauke Albada, Pascal Prochnow, Sandra Bobersky, Julia E. Bandow and Nils Metzler-Nolte
Chemical Science (2010-Present) 2014 - vol. 5(Issue 11) pp:NaN4459-4459
Publication Date(Web):2014/08/05
DOI:10.1039/C4SC01822B
The rapid increase in resistance against common antibiotics calls for the development of novel antibiotics, particularly against multi-resistant bacteria such as the methicillin-resistant Staphylococcus aureus (MRSA). In this work, the two group 8 metallocenoyl derivatives ferrocenoyl (FcC(O)-) or ruthenocenoyl (RcC(O)-) were attached to the N-terminus of two libraries of short antimicrobial peptides (AMPs), resulting in organometallic-AMP derivatives with as yet unparalleled antibacterial activities. In addition, these organometallic AMPs only cause limited lysis of human red blood cells (hRBCs). Our structure–activity relationship (SAR) study on these metallocenoylated peptides showed that specific combinations of L- and D-amino acid residues result in peptides with significantly improved antibacterial activity. Whereas the all-L FcC(O)-containing lead peptide had a MIC of 12 μM against MRSA, several peptides were found with MIC-values as low as 1.5–3 μM, a 4–8-fold increase in activity. For the RcC(O)-derivatized peptides a similar result was obtained: against MRSA a MIC value of 5.8 μM for the all-L peptide could be lowered to 0.7 μM, an 8-fold improvement. In addition, exposure of human red blood cells with 121 μM of the most active peptides led to a maximum hemolysis of 6%, indicating prominent selectivity that can be used to realize antibiotics based on organometallic-AMPs. We have hereby performed a systematic and highly successful SAR optimization against the two crucial parameters, i.e. antibacterial activity and hemolysis. Importantly, some of the RcC(O)-derivatized peptides presented here are among the most active antibacterial peptides; they approach or even exceed the activity of vancomycin.
Co-reporter:Johannes Zagermann, Mariusz Molon and Nils Metzler-Nolte
Dalton Transactions 2011 - vol. 40(Issue 5) pp:NaN1015-1015
Publication Date(Web):2010/11/22
DOI:10.1039/C0DT01121E
An improved synthesis for the mixed-ligand tris(pyrazolyl)borate sandwich compound TpRu(p-BrC6H4Tp) 1 by microwave-assisted synthesis starting from RuTp(COD)Cl (COD: 1,4-cyclooctadiene, Tp: hydrido-tris(pyrazolyl)borate) was developed. Air-stable 1 was characterized by an X-ray single crystal structure and has been converted to the acid-functionalized TpRu(p-(CO2H)-C6H4Tp) 2, which may be readily coupled to biomolecules as exemplified by the covalent attachment to valine-tert-butylester to give TpRu(p-(CO-Val-OtBu)-C6H4Tp) 3. In solid phase peptide synthesis (SPPS), 2 has been coupled to the pentapeptide Enkephalin, providing TpRu(p-(CO-Tyr-Gly-Gly-Phe-Leu-OH)-C6H4Tp) 4 as the first example of a ruthenium Tp sandwich bioconjugate.
Co-reporter:Malay Patra, Gilles Gasser and Nils Metzler-Nolte
Dalton Transactions 2012 - vol. 41(Issue 21) pp:NaN6358-6358
Publication Date(Web):2012/03/12
DOI:10.1039/C2DT12460B
The emergence of bacterial resistance to commercial antibiotics is an issue of global importance. During the last two decades, the number of antibacterial agents that have been discovered and introduced into the market has steadily declined and failed to meet the challenges posed by rapidly increasing resistance of the pathogens against common antibacterial drugs. The development of new classes of compounds to control the virulence of the pathogens is therefore urgently required. This perspective describes the historical development in brief and recent advances on the preparation of small organometallic compounds as new classes of antibacterial agents with potential for clinical development.
Co-reporter:Anna M. Sosniak, Gilles Gasser and Nils Metzler-Nolte
Organic & Biomolecular Chemistry 2009 - vol. 7(Issue 23) pp:NaN5000-5000
Publication Date(Web):2009/10/13
DOI:10.1039/B913964H
The preparation of new metal-containing Peptide Nucleic Acids (PNAs) is currently a field of research intensively studied for various purposes, e.g.DNA biosensors. The role played by the metal centre, notably on the stability of the PNA·DNA hybrid, is obviously crucial, but has not yet been fully investigated. In this work, UV-Vis spectroscopic measurements of solutions of DNA·PNA hybrids, whose 11/12-mer PNA oligomers contained either one or two alkyne- (1) or ferrocene-containing (2) PNA monomers, were carried out to determine the effect of these monomers on the thermal stability of the hybrids (PNA: H-Gly-X-gggtc-Y-agctt-X-Lys-NH2 with X = 1 or 2 and Y = 1 or 2 or blank position). Supplementary CD spectroscopic measurements were performed to gain insight into the structures of the PNA·DNA duplexes formed. The effect of both modified monomers was found to depend on their actual positions within the PNA sequences. Insertions at the N- or C-termini of a PNA oligomer did not change the melting temperatures (Tm values of about 72 °C) of the DNA·PNA hybrids significantly. Insertion of monomers 1 or 2 in the middle of a PNA sequence induced a substantial decrease in the Tm of the hybrids (by about 23 °C) when bound to the same DNA oligomer. Interestingly, it was found that the type of modification, namely alkyne or ferrocene, did not significantly influence the Tm values in these cases. However, the thermal stability of hybrids with the DNA oligomers containing one to four additional thymines and the PNA oligomers containing the ferrocene moiety in its middle, varied significantly with the number of thymines added compared to its alkyne analogues (ΔTm up to −13 °C). The presence of the ferrocene moiety induced a significant decrease in thermal stability of the hybrids, probably due to its bulkiness. In order to assess the effect of PNA backbone rigidity on the stability of DNA·PNA hybrids, PNA oligomers with an internal amino acid, propargylglycine (Pgl) or the dipeptide glycine-propargylglycine (Gly-Pgl), were synthesised. It was assumed that the orientation of the alkyne moiety in the Pgl-containing PNA sequence is not identical to an alkyne-containing PNA sequence, as a significantly higher Tm value (ΔTm = +10 °C) was measured. It is anticipated that the alkyne moiety in Pgl is not facing the DNA base and therefore does not disturb as much the neighbouring nucleobases and base-stacking of the complementary DNA, in contrast to the alkyne moiety of 1. Interestingly, no significant differences in the thermal stability of the hybrids was observed between Pgl-containing and dipeptide-containing PNA oligomers, although the former contracts the PNA backbone by three atoms.
Co-reporter:Jessica Lemke, Antonio Pinto, Philip Niehoff, Vera Vasylyeva and Nils Metzler-Nolte
Dalton Transactions 2009(Issue 35) pp:NaN7070-7070
Publication Date(Web):2009/07/16
DOI:10.1039/B906140A
We report the synthesis of new NHC gold(I) and NHC gold(III) halide, amino acid and dipeptide complexes. Transmetallation of the N-phenylalanine-substituted NHC silver complex 3 with Me2SAuCl yields the phenylalanine–NHC gold(I) conjugate 4a. Halide exchange with LiBr and oxidation of 4a with Br2 in CH2Cl2 yields the phenylalanine–NHC Au(I) and Au(III) bromides 4b and 4c, respectively. Reaction of N-Boc protected cysteine methyl ester (Boc–Cys–OMe) or the dipeptideN-Boc–Leu–Cys–OMe with the NHC gold chloride 6a yields the (NHC)Au–S complexed amino acid and dipeptide derivatives 8 and 9. The NHC gold(III) complexes 4c and 6c were characterised by single crystal X-ray analysis. All of the tested gold carbene complexes showed significant anti-tumor activity on the HeLa, HepG2 and HT-29 cancer cell lines. The best compounds show activity comparable to the well-known anti-cancer drug cisplatin. There seems to be no clear cut structure–activity relationship in the compounds tested, nor did we observe a dependence on the metal oxidation state or the different halide substituents. Given the ease of preparation, stability and high activity of the compounds described herein, it may be possible to design tumor-specific anti-cancer agents based on NHC gold amino acid conjugates in the future.
1H-Imidazole-1-sulfonyl azide hydrochloride
L-Leucine, N-(1-oxo-4-pentyn-1-yl)-, methyl ester
L-LEUCINE, N-(4-IODOBENZOYL)-L-TYROSYLGLYCYLGLYCYL-L-PHENYLALANYL-
Benzoic acid, 4-(bromomethyl)-, pentafluorophenyl ester
L-Alanine, N-(1-oxo-4-pentynyl)-, methyl ester
Gold,[1,3-bis(1,1-dimethylethyl)-1,3-dihydro-2H-imidazol-2-ylidene]bromo-
Gold,[1,3-bis(1,1-dimethylethyl)-1,3-dihydro-2H-imidazol-2-ylidene]chloro-
1H-Imidazolium, 1-(2-methoxyethyl)-3-methyl-, chloride
L-Phenylalanine, N-(1-oxo-4-pentynyl)-, methyl ester